FFCP PHASE1:Hg19::chr9:36834591..36834598,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:36834591..36834598,- | |||
|coexpression_cluster_id=C857 | |||
|description=CAGE_peak_at_chr9:36834591..36834598,- | |||
|id=chr9:36834591..36834598,- | |||
|ontology_enrichment_celltype=CL:0000945!3.82e-63!24;CL:0000826!3.82e-63!24;CL:0000542!2.28e-32!53;CL:0000051!2.28e-32!53;CL:0000236!4.28e-30!14;CL:0000838!8.98e-30!52;CL:0002087!1.52e-15!119;CL:0000817!1.85e-14!3;CL:0002031!3.01e-13!124;CL:0000738!2.19e-12!140;CL:0002032!8.77e-12!165;CL:0000837!8.77e-12!165;CL:0000037!4.59e-11!172;CL:0000566!4.59e-11!172;CL:0000988!3.90e-10!182;CL:0000785!4.34e-10!2;CL:0000955!4.34e-10!2;CL:0000818!4.34e-10!2;CL:0000954!4.34e-10!2;CL:0000816!4.34e-10!2;CL:0000242!5.93e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.03e-61;24!CL:0000542;1.58e-24;53!CL:0000236;2.69e-24;13!CL:0000817;4.53e-14;1!CL:0000785;6.24e-14;1!CL:0000819;6.24e-14;1!CL:0002087;3.12e-08;104!CL:0000123;1.99e-07;2!CL:0000242;1.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.95e-61,24;CL:0000826,2.95e-61,24;CL:0000542,4.96e-38,53;CL:0000051,4.96e-38,53;CL:0000838,5.26e-33,52;CL:0000236,1.35e-22,14;CL:0000817,8.40e-18,3;CL:0002087,1.46e-16,115;CL:0000819,6.65e-14,1;CL:0000738,8.92e-14,136;CL:0002031,2.28e-13,120;CL:0002032,2.15e-11,161;CL:0000837,2.15e-11,161;CL:0000037,7.47e-11,168;CL:0000988,3.22e-10,177;CL:0000785,1.36e-07,2;CL:0000955,1.36e-07,2;CL:0000818,1.36e-07,2;CL:0000954,1.36e-07,2;CL:0000816,1.36e-07,2;CL:0000242,2.40e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.58e-24;53!CL:0000954;1.32e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!4.47e-16!10;DOID:2531!4.77e-10!51;DOID:0060083!4.77e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.20e-31;10!DOID:0060073;6.24e-14;1!DOID:8675;6.24e-14;1!DOID:12603;1.42e-13;1!DOID:2531;2.40e-08;51!DOID:0060083;2.40e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.18e-31,10;DOID:2531,7.53e-15,51;DOID:0060083,7.53e-15,51;DOID:0060073,6.65e-14,1;DOID:8675,6.65e-14,1;DOID:12603,1.42e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.40e-13!3;UBERON:0004854!1.40e-13!3;UBERON:0009034!1.40e-13!3;UBERON:0002095!1.40e-13!3;UBERON:0004782!1.40e-13!3;UBERON:0003281!1.40e-13!3;UBERON:0009664!1.40e-13!3;UBERON:0002296!1.40e-13!3;UBERON:0005602!1.40e-13!3;UBERON:0001179!1.40e-13!3;UBERON:0006293!1.40e-13!3;UBERON:0000988!1.16e-12!3;UBERON:0002148!4.33e-09!2;UBERON:0009662!4.33e-09!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,1.31360943119913,1.25937250101887,0,0,0,0,0,0,2.09161441566814,1.70603078984906,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0,5.69212969109448,3.52342313622563,4.58727873750275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,1.30062222588003,4.47234560226979,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46664099509765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,2.89176089707246,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931406652723629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,5.48066692714032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936669811613763,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,4.17967248506643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0.439762066981716,0.905777061400041,0,0,0,0,0,0,0,0,0,0.751871343838829,0.193373663920732,1.99882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p@chr9:36834591..36834598,- | |||
}} |
Latest revision as of 01:57, 1 August 2015
Short description: | p@chr9:36834591..36834598, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:36834591..36834598, - |
Coexpression cluster: | C857_non_lymphoma_CD19_acute_diffuse_Burkitt_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.95e-61 | 24 |
pro-B cell | 2.95e-61 | 24 |
lymphocyte | 4.96e-38 | 53 |
common lymphoid progenitor | 4.96e-38 | 53 |
lymphoid lineage restricted progenitor cell | 5.26e-33 | 52 |
B cell | 1.35e-22 | 14 |
precursor B cell | 8.40e-18 | 3 |
nongranular leukocyte | 1.46e-16 | 115 |
B-1 B cell | 6.65e-14 | 1 |
leukocyte | 8.92e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 2.28e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.15e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.15e-11 | 161 |
hematopoietic stem cell | 7.47e-11 | 168 |
hematopoietic cell | 3.22e-10 | 177 |
mature B cell | 1.36e-07 | 2 |
pre-B-II cell | 1.36e-07 | 2 |
transitional stage B cell | 1.36e-07 | 2 |
small pre-B-II cell | 1.36e-07 | 2 |
immature B cell | 1.36e-07 | 2 |
Merkel cell | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.18e-31 | 10 |
hematologic cancer | 7.53e-15 | 51 |
immune system cancer | 7.53e-15 | 51 |
lymphatic system cancer | 6.65e-14 | 1 |
lymphosarcoma | 6.65e-14 | 1 |
acute leukemia | 1.42e-13 | 1 |