FFCP PHASE1:Mm9::chr6:16848347..16848391,-: Difference between revisions
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{{FFCP|EntrezGene=21426|HGNC=|UniProt=Q9WTW4,Q3TZX0|association_with_transcript=49bp_to_ENSMUST00000031533,NM_031198,uc009aze.2,uc009azf.2,uc009azg.1_5end|description=CAGE_peak_1_at_Tfec_5end|id=chr6:16848347..16848391,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!8.11e-11!70;UBERON:0009569!2.80e-09!66;UBERON:0002107!8.32e-08!22;UBERON:0007499!8.32e-08!22;UBERON:0006925!8.32e-08!22;UBERON:0009497!8.32e-08!22;UBERON:0000015!8.32e-08!22;UBERON:0002423!8.32e-08!22;UBERON:0006235!8.32e-08!22;UBERON:0008835!8.32e-08!22;UBERON:0003894!8.32e-08!22;UBERON:0004161!8.32e-08!22;UBERON:0008836!8.32e-08!22;UBERON:0000926!1.15e-07!193;UBERON:0004120!1.15e-07!193;UBERON:0006603!1.15e-07!193;UBERON:0003104!2.40e-07!131;UBERON:0009142!2.40e-07!131;UBERON:0005172!3.29e-07!49;UBERON:0005173!3.29e-07!49;UBERON:0002417!3.29e-07!49;UBERON:0000916!3.29e-07!49;UBERON:0002100!3.62e-07!98;UBERON:0002365!3.93e-07!25;UBERON:0002330!3.93e-07!25;UBERON:0005177!4.27e-07!85;UBERON:0009854!5.11e-07!23;UBERON:0009856!5.11e-07!23;UBERON:0002204!9.48e-07!32;UBERON:0005256!9.87e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.49e-12,22;UBERON:0007499,1.49e-12,22;UBERON:0006925,1.49e-12,22;UBERON:0009497,1.49e-12,22;UBERON:0000015,1.49e-12,22;UBERON:0002423,1.49e-12,22;UBERON:0006235,1.49e-12,22;UBERON:0008835,1.49e-12,22;UBERON:0003894,1.49e-12,22;UBERON:0004161,1.49e-12,22;UBERON:0008836,1.49e-12,22;UBERON:0009854,9.39e-12,23;UBERON:0009856,9.39e-12,23;UBERON:0002100,3.49e-11,90;UBERON:0009569,5.96e-11,66;UBERON:0005256,1.42e-10,45;UBERON:0002365,2.36e-10,25;UBERON:0002330,2.36e-10,25;UBERON:0005172,1.15e-09,49;UBERON:0005173,1.15e-09,49;UBERON:0002417,1.15e-09,49;UBERON:0000916,1.15e-09,49;UBERON:0005177,3.82e-09,79;UBERON:0003104,3.86e-09,61;UBERON:0009142,3.86e-09,61;UBERON:0002204,5.80e-09,32;UBERON:0001041,3.44e-07,80;UBERON:0001474,7.23e-07,22;UBERON:0004765,7.23e-07,22;UBERON:0001434,7.23e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,0.809901069559304,0.699561878128147,0.630924330716475,0.137114433605739,2.54633791078818,0.765389611359628,0,0,0.319984845586813,0,1.14846392823004,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,6.69650609179052,14.8453715459522,7.85285615960697,0.588231488031014,0,2.42755176515577,0,0,0,0,0,0,0,0,0,0,0,0,1.02903774414379,2.57880095944881,1.54701627683233,0,0,0,0,0,1.7997994345628,1.97773272513395,4.2628806896766,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0,0,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0.589257170947335,0.427115042397309,0.186399445825301,0,0.302286240427142,21.7398366526258,2.58127163094416,0,0,1.29955283489534,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.79928715803342,7.76813650941515,1.03909497345377,0.346970653532272,0.608930956624282,0.691846491768175,0.904335843315735,1.17588707135705,0,0.494389935468748,0.289198713839823,1.76922110389975,1.13236794963186,2.87093973998512,1.45462575940567,0,0,0,0.510914110417183,9.10594946244994,17.9970819298022,18.4251829255944,0,0,0,0.173824320192276,0,0,0,0.81471491080253,3.11017426525233,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0,0.60281927134286,0.204109497453984,0,0.187403449119458,0,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.278047249225598,0.696504333044333,0.411564272815887,0.398068533636986,27.3863143052162,37.058098624519,26.1430419443945,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.462801338662135,0,0,0,0.329119699826961,0.164167464079095,0.162137619091711,0.584799949701329,0.219550115291051,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0.696710015581316,1.28867461322093,3.42861991859682,4.44756087689741,5.51654315726422,0,2.14108641141214,2.01068167040216,1.59165177632921,2.33956904542944,0,0.432276099749388,0,0.379335801906163,0.228497025219458,1.1270773567308,0,0.193952487167626,0.350679099451593,0.0632365371242573,0,0,0,1.1858105083486,1.83529616287703,1.37591296579242,3.59779379815766,2.84004169943904,3.37648023653384,4.32863948028414,2.87696137450811,5.67473293712624,4.66754402419738,11.5014565221884,4.46569137202204,5.92871578917665,2.02063102357689,1.61457672169721,0.964887042726734,0.923765950833023,0.568474235311454,0.488894929326078,0.848725428875941,0.469380496577004,2.34508760418542,3.09456733151818,1.75620283072019,1.89162172927429,0.664394068946325,1.2756381492599,1.14704320301017,2.41758974612254,3.03763023021174,9.04747703635634,4.35124547054968,0.491764273019036,0.827810238914197,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0.614870295887855,1.03371317267288,0.363533729477506,0.356497378384721,0,1.05418608574999,1.03135543248187,0,0.36012218806262,0.388076051348264,0.428674070063185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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21426 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q9WTW4,Q3TZX0 | |||
|association_with_transcript=49bp_to_ENSMUST00000031533,NM_031198,uc009aze.2,uc009azf.2,uc009azg.1_5end | |||
|cluster_id=chr6:16848347..16848391,- | |||
|description=CAGE_peak_1_at_Tfec_5end | |||
|id=chr6:16848347..16848391,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!8.11e-11!70;UBERON:0009569!2.80e-09!66;UBERON:0002107!8.32e-08!22;UBERON:0007499!8.32e-08!22;UBERON:0006925!8.32e-08!22;UBERON:0009497!8.32e-08!22;UBERON:0000015!8.32e-08!22;UBERON:0002423!8.32e-08!22;UBERON:0006235!8.32e-08!22;UBERON:0008835!8.32e-08!22;UBERON:0003894!8.32e-08!22;UBERON:0004161!8.32e-08!22;UBERON:0008836!8.32e-08!22;UBERON:0000926!1.15e-07!193;UBERON:0004120!1.15e-07!193;UBERON:0006603!1.15e-07!193;UBERON:0003104!2.40e-07!131;UBERON:0009142!2.40e-07!131;UBERON:0005172!3.29e-07!49;UBERON:0005173!3.29e-07!49;UBERON:0002417!3.29e-07!49;UBERON:0000916!3.29e-07!49;UBERON:0002100!3.62e-07!98;UBERON:0002365!3.93e-07!25;UBERON:0002330!3.93e-07!25;UBERON:0005177!4.27e-07!85;UBERON:0009854!5.11e-07!23;UBERON:0009856!5.11e-07!23;UBERON:0002204!9.48e-07!32;UBERON:0005256!9.87e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.49e-12,22;UBERON:0007499,1.49e-12,22;UBERON:0006925,1.49e-12,22;UBERON:0009497,1.49e-12,22;UBERON:0000015,1.49e-12,22;UBERON:0002423,1.49e-12,22;UBERON:0006235,1.49e-12,22;UBERON:0008835,1.49e-12,22;UBERON:0003894,1.49e-12,22;UBERON:0004161,1.49e-12,22;UBERON:0008836,1.49e-12,22;UBERON:0009854,9.39e-12,23;UBERON:0009856,9.39e-12,23;UBERON:0002100,3.49e-11,90;UBERON:0009569,5.96e-11,66;UBERON:0005256,1.42e-10,45;UBERON:0002365,2.36e-10,25;UBERON:0002330,2.36e-10,25;UBERON:0005172,1.15e-09,49;UBERON:0005173,1.15e-09,49;UBERON:0002417,1.15e-09,49;UBERON:0000916,1.15e-09,49;UBERON:0005177,3.82e-09,79;UBERON:0003104,3.86e-09,61;UBERON:0009142,3.86e-09,61;UBERON:0002204,5.80e-09,32;UBERON:0001041,3.44e-07,80;UBERON:0001474,7.23e-07,22;UBERON:0004765,7.23e-07,22;UBERON:0001434,7.23e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,0.809901069559304,0.699561878128147,0.630924330716475,0.137114433605739,2.54633791078818,0.765389611359628,0,0,0.319984845586813,0,1.14846392823004,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,6.69650609179052,14.8453715459522,7.85285615960697,0.588231488031014,0,2.42755176515577,0,0,0,0,0,0,0,0,0,0,0,0,1.02903774414379,2.57880095944881,1.54701627683233,0,0,0,0,0,1.7997994345628,1.97773272513395,4.2628806896766,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0,0,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0.589257170947335,0.427115042397309,0.186399445825301,0,0.302286240427142,21.7398366526258,2.58127163094416,0,0,1.29955283489534,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.79928715803342,7.76813650941515,1.03909497345377,0.346970653532272,0.608930956624282,0.691846491768175,0.904335843315735,1.17588707135705,0,0.494389935468748,0.289198713839823,1.76922110389975,1.13236794963186,2.87093973998512,1.45462575940567,0,0,0,0.510914110417183,9.10594946244994,17.9970819298022,18.4251829255944,0,0,0,0.173824320192276,0,0,0,0.81471491080253,3.11017426525233,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0,0.60281927134286,0.204109497453984,0,0.187403449119458,0,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.278047249225598,0.696504333044333,0.411564272815887,0.398068533636986,27.3863143052162,37.058098624519,26.1430419443945,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.462801338662135,0,0,0,0.329119699826961,0.164167464079095,0.162137619091711,0.584799949701329,0.219550115291051,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0.696710015581316,1.28867461322093,3.42861991859682,4.44756087689741,5.51654315726422,0,2.14108641141214,2.01068167040216,1.59165177632921,2.33956904542944,0,0.432276099749388,0,0.379335801906163,0.228497025219458,1.1270773567308,0,0.193952487167626,0.350679099451593,0.0632365371242573,0,0,0,1.1858105083486,1.83529616287703,1.37591296579242,3.59779379815766,2.84004169943904,3.37648023653384,4.32863948028414,2.87696137450811,5.67473293712624,4.66754402419738,11.5014565221884,4.46569137202204,5.92871578917665,2.02063102357689,1.61457672169721,0.964887042726734,0.923765950833023,0.568474235311454,0.488894929326078,0.848725428875941,0.469380496577004,2.34508760418542,3.09456733151818,1.75620283072019,1.89162172927429,0.664394068946325,1.2756381492599,1.14704320301017,2.41758974612254,3.03763023021174,9.04747703635634,4.35124547054968,0.491764273019036,0.827810238914197,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0.614870295887855,1.03371317267288,0.363533729477506,0.356497378384721,0,1.05418608574999,1.03135543248187,0,0.36012218806262,0.388076051348264,0.428674070063185,0,0.535106452806212,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0,1.45317984026315,0.603129249281559,0.238744688006273,0.164140899745061,0.291480836629851,0,2.9048049735635,2.68302928352189,3.51869602002452,3.57900068308913,1.91371918809435,1.14389086603261,2.54967644990783,4.19854356970974,1.93479963326193,0,0,0.609958401380546,0.216010681643603,0.418176592028937,0.655087691238533,0.674321731924103,0.495920734352016,0.785267825952089,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0,0.209718688851422,0,0.288030006257865,0,1.01362607645082,0.513554785824136,1.42912905275575,1.25318686967237,0.596044064343795,0.480781798079875,0.886137163047463,0.706765149637033,0.609654453239999,0.504130925684203,0.682205165178267,0.577271049841977,1.40252282617883,0.226730383615211,0,0,0,0.386379188064381,0.563047426353546,0,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,1.94485373654635,0.419226325255965,1.10306105070008,1.33348036680969,0.412070114477788,0.320919209591815,1.26348605881899,0.50695859978048,0.943131706930381,0.936415074698824,1.08842759088278,0.574354689556133,0.476293691283074,0.927074607558844,0.578727661391115,0,0.735994600671987,1.71434626192708,1.06485483695602,0.953744759789284,0.872078499793971,1.41164070622996,0.930760686808441,1.46342378298218,1.05227884575137,1.49384525230448,0.561142271657738,0.355905054372522,0.985044823755635,0.409231043169689,0.309873682371932,0.578719832943424,0,0.935726433781634,1.07435527024149,0.765153328275374,3.08827986767322,0.695603506861264 | |||
|short_description=p1@Tfec | |||
}} |
Latest revision as of 23:21, 26 September 2015
Short description: | p1@Tfec |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tfec_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENSMUST00000031533, NM_031198, uc009aze.2, uc009azf.2, uc009azg.1_5end |
EntrezGene: | Tfec |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.49e-12 | 22 |
epithelial sac | 1.49e-12 | 22 |
digestive gland | 1.49e-12 | 22 |
epithelium of foregut-midgut junction | 1.49e-12 | 22 |
anatomical boundary | 1.49e-12 | 22 |
hepatobiliary system | 1.49e-12 | 22 |
foregut-midgut junction | 1.49e-12 | 22 |
hepatic diverticulum | 1.49e-12 | 22 |
liver primordium | 1.49e-12 | 22 |
septum transversum | 1.49e-12 | 22 |
liver bud | 1.49e-12 | 22 |
digestive tract diverticulum | 9.39e-12 | 23 |
sac | 9.39e-12 | 23 |
trunk | 3.49e-11 | 90 |
subdivision of trunk | 5.96e-11 | 66 |
trunk mesenchyme | 1.42e-10 | 45 |
exocrine gland | 2.36e-10 | 25 |
exocrine system | 2.36e-10 | 25 |
abdomen element | 1.15e-09 | 49 |
abdominal segment element | 1.15e-09 | 49 |
abdominal segment of trunk | 1.15e-09 | 49 |
abdomen | 1.15e-09 | 49 |
trunk region element | 3.82e-09 | 79 |
mesenchyme | 3.86e-09 | 61 |
entire embryonic mesenchyme | 3.86e-09 | 61 |
musculoskeletal system | 5.80e-09 | 32 |
foregut | 3.44e-07 | 80 |
bone element | 7.23e-07 | 22 |
skeletal element | 7.23e-07 | 22 |
skeletal system | 7.23e-07 | 22 |