FFCP PHASE1:Mm9::chr7:134072423..134072440,+: Difference between revisions
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{{FFCP|EntrezGene=233877|HGNC=|MCL_coexpression_id=0|UniProt=Q8BGV7|association_with_transcript=30bp_to_ENSMUST00000032924,NM_172747,uc009jtm.1_5end|description=CAGE_peak_4_at_Kctd13_5end|id=chr7:134072423..134072440,+|ontology_enrichment_celltype=CL:0000117!9.14e-14!23;CL:0000337!9.14e-14!23;CL:0000540!4.66e-12!33;CL:0000047!4.66e-12!33;CL:0000031!4.66e-12!33;CL:0000404!4.66e-12!33;CL:0002319!2.87e-11!43;CL:0000221!8.38e-11!44;CL:0000133!8.38e-11!44;CL:0000393!1.54e-09!39;CL:0000211!1.54e-09!39;CL:0000055!1.13e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.70e-24,23;CL:0000337,8.70e-24,23;CL:0000540,6.18e-16,33;CL:0000047,6.18e-16,33;CL:0000031,6.18e-16,33;CL:0000404,6.18e-16,33;CL:0002319,1.93e-14,43;CL:0000221,6.09e-14,44;CL:0000133,6.09e-14,44;CL:0000393,1.86e-12,39;CL:0000211,1.86e-12,39;CL:0002321,7.20e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.46e-21!73;UBERON:0005743!3.46e-21!73;UBERON:0000073!7.97e-21!75;UBERON:0001016!7.97e-21!75;UBERON:0001049!3.84e-18!52;UBERON:0005068!3.84e-18!52;UBERON:0006241!3.84e-18!52;UBERON:0007135!3.84e-18!52;UBERON:0002020!1.88e-17!34;UBERON:0000955!9.50e-17!50;UBERON:0006238!9.50e-17!50;UBERON:0002616!2.04e-16!49;UBERON:0002346!2.82e-15!71;UBERON:0003075!2.82e-15!71;UBERON:0007284!2.82e-15!71;UBERON:0002791!2.05e-14!29;UBERON:0003528!2.05e-14!29;UBERON:0001893!2.05e-14!29;UBERON:0004121!5.00e-14!102;UBERON:0000924!5.00e-14!102;UBERON:0006601!5.00e-14!102;UBERON:0003080!3.82e-13!40;UBERON:0000033!3.94e-13!63;UBERON:0002780!1.65e-12!39;UBERON:0001890!1.65e-12!39;UBERON:0006240!1.65e-12!39;UBERON:0003056!1.19e-11!49;UBERON:0000956!9.41e-10!21;UBERON:0001869!9.41e-10!21;UBERON:0000203!9.41e-10!21;UBERON:0007811!4.03e-08!86;UBERON:0002619!4.80e-08!17;UBERON:0000153!3.85e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.09e-33,54;UBERON:0001017,4.94e-31,73;UBERON:0001049,1.39e-30,52;UBERON:0005068,1.39e-30,52;UBERON:0006241,1.39e-30,52;UBERON:0007135,1.39e-30,52;UBERON:0002020,5.91e-30,34;UBERON:0001016,7.71e-30,75;UBERON:0003528,1.11e-23,29;UBERON:0002791,1.11e-23,29;UBERON:0001893,1.11e-23,29;UBERON:0002616,2.68e-23,46;UBERON:0002346,1.15e-22,64;UBERON:0003075,1.15e-22,64;UBERON:0007284,1.15e-22,64;UBERON:0000955,1.36e-22,47;UBERON:0006238,1.36e-22,47;UBERON:0004121,1.05e-20,95;UBERON:0000924,1.05e-20,95;UBERON:0006601,1.05e-20,95;UBERON:0003080,2.07e-20,40;UBERON:0002780,3.61e-19,39;UBERON:0001890,3.61e-19,39;UBERON:0006240,3.61e-19,39;UBERON:0010371,1.83e-18,73;UBERON:0003056,4.16e-15,49;UBERON:0000956,3.10e-14,21;UBERON:0001869,3.10e-14,21;UBERON:0000203,3.10e-14,21;UBERON:0010314,2.24e-12,92;UBERON:0002420,4.34e-11,8;UBERON:0007245,4.34e-11,8;UBERON:0010009,4.34e-11,8;UBERON:0010011,4.34e-11,8;UBERON:0000454,4.34e-11,8;UBERON:0002619,9.09e-11,17;UBERON:0003076,9.39e-11,12;UBERON:0003057,9.39e-11,12;UBERON:0002021,6.47e-10,10;UBERON:0000411,6.47e-10,10;UBERON:0001950,6.47e-10,10;UBERON:0000025,2.38e-09,114;UBERON:0002240,5.94e-09,6;UBERON:0005174,5.94e-09,6;UBERON:0001137,5.94e-09,6;UBERON:0004111,4.79e-08,122;UBERON:0000473,7.94e-08,14;UBERON:0001948,1.53e-07,5;UBERON:0002315,1.53e-07,5;UBERON:0000369,1.73e-07,5;UBERON:0002435,1.73e-07,5;UBERON:0000204,1.73e-07,5;UBERON:0010082,1.73e-07,5;UBERON:0003135,3.76e-07,15|phase1_expression=0.320297694209588,0.348975407639361,1.36499771816861,0.90739263392049,0.500895729946347,0.503637815735669,0.700837921786577,0,0.140788722151667,0.70219357896598,0.68487187290202,1.67521533890206,0,0.262261207256992,0,0,0.699561878128147,0,0,0.84877930359606,4.93251082876205,0.496454756004426,0.522399578277871,0,0.68822784320151,0.57423196411502,0.430761996159075,0.646413698057667,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,1.84519436275371,0,0.288851619751275,0,0,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0,0.251793635951155,0.405507724878058,0.183546752161682,0,2.61630187656536,1.31811709640683,0.972149495371417,0.419959264876088,0,0,0.725362142011344,0.672187598284928,0,0,0.515672092277442,3.64169629547276,2.64495489636016,3.1691570175309,0.338844532069132,0,0,0.988866362566974,0,0.299600110518405,1.53687322128622,1.03689612308478,1.4850653216486,1.47227472945967,2.57085885963423,2.20868540951614,1.71487118900936,0.766763768145891,0.919218786610021,8.8092704799511,2.93680877595932,3.37934373163736,3.16527090552465,3.47653045689157,3.12548022334056,2.51264699101243,2.8138130501584,3.0559649555362,2.35702868378934,2.56269025438385,5.03278503728312,0.302904773332736,0.302286240427142,0.289864488701678,0,0,0,0,0.896053774194671,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,1.02765491747154,0.517875767294343,0.148442139064825,0.867426633830679,0.304465478312141,0.461230994512117,0.753613202763113,0.470354828542819,0.376999773989026,0,0,0,0.161766849947409,0.441683036920787,0,0,0.585561594023094,1.25668024088073,0,0.359445373517761,0,0,4.19413790333504,1.8300024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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=233877 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGV7 | |||
|association_with_transcript=30bp_to_ENSMUST00000032924,NM_172747,uc009jtm.1_5end | |||
|cluster_id=chr7:134072423..134072440,+ | |||
|description=CAGE_peak_4_at_Kctd13_5end | |||
|id=chr7:134072423..134072440,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.14e-14!23;CL:0000337!9.14e-14!23;CL:0000540!4.66e-12!33;CL:0000047!4.66e-12!33;CL:0000031!4.66e-12!33;CL:0000404!4.66e-12!33;CL:0002319!2.87e-11!43;CL:0000221!8.38e-11!44;CL:0000133!8.38e-11!44;CL:0000393!1.54e-09!39;CL:0000211!1.54e-09!39;CL:0000055!1.13e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.70e-24,23;CL:0000337,8.70e-24,23;CL:0000540,6.18e-16,33;CL:0000047,6.18e-16,33;CL:0000031,6.18e-16,33;CL:0000404,6.18e-16,33;CL:0002319,1.93e-14,43;CL:0000221,6.09e-14,44;CL:0000133,6.09e-14,44;CL:0000393,1.86e-12,39;CL:0000211,1.86e-12,39;CL:0002321,7.20e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.46e-21!73;UBERON:0005743!3.46e-21!73;UBERON:0000073!7.97e-21!75;UBERON:0001016!7.97e-21!75;UBERON:0001049!3.84e-18!52;UBERON:0005068!3.84e-18!52;UBERON:0006241!3.84e-18!52;UBERON:0007135!3.84e-18!52;UBERON:0002020!1.88e-17!34;UBERON:0000955!9.50e-17!50;UBERON:0006238!9.50e-17!50;UBERON:0002616!2.04e-16!49;UBERON:0002346!2.82e-15!71;UBERON:0003075!2.82e-15!71;UBERON:0007284!2.82e-15!71;UBERON:0002791!2.05e-14!29;UBERON:0003528!2.05e-14!29;UBERON:0001893!2.05e-14!29;UBERON:0004121!5.00e-14!102;UBERON:0000924!5.00e-14!102;UBERON:0006601!5.00e-14!102;UBERON:0003080!3.82e-13!40;UBERON:0000033!3.94e-13!63;UBERON:0002780!1.65e-12!39;UBERON:0001890!1.65e-12!39;UBERON:0006240!1.65e-12!39;UBERON:0003056!1.19e-11!49;UBERON:0000956!9.41e-10!21;UBERON:0001869!9.41e-10!21;UBERON:0000203!9.41e-10!21;UBERON:0007811!4.03e-08!86;UBERON:0002619!4.80e-08!17;UBERON:0000153!3.85e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.09e-33,54;UBERON:0001017,4.94e-31,73;UBERON:0001049,1.39e-30,52;UBERON:0005068,1.39e-30,52;UBERON:0006241,1.39e-30,52;UBERON:0007135,1.39e-30,52;UBERON:0002020,5.91e-30,34;UBERON:0001016,7.71e-30,75;UBERON:0003528,1.11e-23,29;UBERON:0002791,1.11e-23,29;UBERON:0001893,1.11e-23,29;UBERON:0002616,2.68e-23,46;UBERON:0002346,1.15e-22,64;UBERON:0003075,1.15e-22,64;UBERON:0007284,1.15e-22,64;UBERON:0000955,1.36e-22,47;UBERON:0006238,1.36e-22,47;UBERON:0004121,1.05e-20,95;UBERON:0000924,1.05e-20,95;UBERON:0006601,1.05e-20,95;UBERON:0003080,2.07e-20,40;UBERON:0002780,3.61e-19,39;UBERON:0001890,3.61e-19,39;UBERON:0006240,3.61e-19,39;UBERON:0010371,1.83e-18,73;UBERON:0003056,4.16e-15,49;UBERON:0000956,3.10e-14,21;UBERON:0001869,3.10e-14,21;UBERON:0000203,3.10e-14,21;UBERON:0010314,2.24e-12,92;UBERON:0002420,4.34e-11,8;UBERON:0007245,4.34e-11,8;UBERON:0010009,4.34e-11,8;UBERON:0010011,4.34e-11,8;UBERON:0000454,4.34e-11,8;UBERON:0002619,9.09e-11,17;UBERON:0003076,9.39e-11,12;UBERON:0003057,9.39e-11,12;UBERON:0002021,6.47e-10,10;UBERON:0000411,6.47e-10,10;UBERON:0001950,6.47e-10,10;UBERON:0000025,2.38e-09,114;UBERON:0002240,5.94e-09,6;UBERON:0005174,5.94e-09,6;UBERON:0001137,5.94e-09,6;UBERON:0004111,4.79e-08,122;UBERON:0000473,7.94e-08,14;UBERON:0001948,1.53e-07,5;UBERON:0002315,1.53e-07,5;UBERON:0000369,1.73e-07,5;UBERON:0002435,1.73e-07,5;UBERON:0000204,1.73e-07,5;UBERON:0010082,1.73e-07,5;UBERON:0003135,3.76e-07,15 | |||
|phase1_expression=0.320297694209588,0.348975407639361,1.36499771816861,0.90739263392049,0.500895729946347,0.503637815735669,0.700837921786577,0,0.140788722151667,0.70219357896598,0.68487187290202,1.67521533890206,0,0.262261207256992,0,0,0.699561878128147,0,0,0.84877930359606,4.93251082876205,0.496454756004426,0.522399578277871,0,0.68822784320151,0.57423196411502,0.430761996159075,0.646413698057667,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,1.84519436275371,0,0.288851619751275,0,0,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0,0.251793635951155,0.405507724878058,0.183546752161682,0,2.61630187656536,1.31811709640683,0.972149495371417,0.419959264876088,0,0,0.725362142011344,0.672187598284928,0,0,0.515672092277442,3.64169629547276,2.64495489636016,3.1691570175309,0.338844532069132,0,0,0.988866362566974,0,0.299600110518405,1.53687322128622,1.03689612308478,1.4850653216486,1.47227472945967,2.57085885963423,2.20868540951614,1.71487118900936,0.766763768145891,0.919218786610021,8.8092704799511,2.93680877595932,3.37934373163736,3.16527090552465,3.47653045689157,3.12548022334056,2.51264699101243,2.8138130501584,3.0559649555362,2.35702868378934,2.56269025438385,5.03278503728312,0.302904773332736,0.302286240427142,0.289864488701678,0,0,0,0,0.896053774194671,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,1.02765491747154,0.517875767294343,0.148442139064825,0.867426633830679,0.304465478312141,0.461230994512117,0.753613202763113,0.470354828542819,0.376999773989026,0,0,0,0.161766849947409,0.441683036920787,0,0,0.585561594023094,1.25668024088073,0,0.359445373517761,0,0,4.19413790333504,1.83000241127451,1.7591609295801,2.08589184230732,1.79000820131231,3.1168206683934,3.0825839982874,0.611036183101898,0.124406970610093,0,0,0.260240885925407,0.459804208866946,0.180062129805349,0.452114453507145,0.544291993210623,0.640568601424249,0.655912071918102,0.258703370739016,0,0.567318240503458,0.527853372491847,0.219195732427575,0,0.348252166522167,0,0.995171334092466,0,0.257347907114715,0,0.414251545071004,0.703578179943289,0.180062061461015,0.23674473558521,0.196764231747404,0.617068451549513,0.465067889500816,0.268273401399619,0.233530684734339,0.16455984991348,0,0.162137619091711,0,0,0,1.89260953707715,2.05809224758569,0,0.264450566663544,0.426576501070468,0,0.515469845288373,0.403367049246685,0.667134131534611,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.685491075658373,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0.246794327843601,0,0.166845105716094,1.17935397067922,0.674586337154561,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0.757736633841335,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0,0.167506257441816,0.714130922658041,0.195133647857799,0.472905432318573,0.44292937929755,0.478364305972461,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,2.56880943980467,3.8679856575427,0,0,0,0.390438744296638,0.215423397732799,0.955875191810208,0.445597348164788,1.13230612315533,0.809621403349789,0.292255857911312,0.790575555893047,0.963963949265421,0.141940085208269,0.712262414669021,0.162886959353576,1.97964147567043,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0,1.09060118843252,0.356497378384721,0,0,0,0,0.540183282093931,0.388076051348264,0,0.177340233642274,0.178368817602071,0.822745103010605,0.608929898229199,0.23467170806371,0.21183207086382,0.441056796109924,0.32977250588296,0,0.0603129249281559,0.119372344003136,0,0,4.63563255026274,0,0.619160603889667,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0.790839983952838,0,0.432021363287205,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,25.9298751794728,0.897099276263873,1.65458490457098,1.55560950675238,1.16243841129958,1.35164900392623,1.05621514781179,1.17183946359555,3.14578033277133,10.6297013163443,15.2655903316669,0.316011120628178,0.405450430580328,0.102710957164827,0.129920822977795,0.537080087002444,0.198681354781265,0.120195449519969,0.147689527174577,0.504832249740738,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0,0.443971906748129,0.269141569828427,0.167884616364078,0.19318959403219,0.563047426353546,0.183151624267265,0,0.501572104035363,1.6942555278512,1.84130094602871,1.14579102687879,1.03111909406213,1.37016503954128,2.2661816921691,1.35004500046361,1.35096360967266,1.35942722695261,1.03552062350364,0.62272408550506,0.798049746802062,0.853668028770671,0.972426868273176,0.628839487883947,0.367687016900028,0,0.206035057238894,0,0.505394423527595,0.760437899670719,1.50901073108861,0.37456602987953,0.704276676453562,0.402048282689293,0,0.463537303779422,0.192909220463705,0,0.735994600671987,0.342869252385415,0.887379030796687,0,1.16277133305863,0.282328141245992,0.507687647350059,0.548783918618318,0,0.271608227691724,0,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| |||
|short_description=p4@Kctd13 | |||
}} |
Latest revision as of 21:49, 25 September 2015
Short description: | p4@Kctd13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Kctd13_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 30bp_to_ENSMUST00000032924, NM_172747, uc009jtm.1_5end |
EntrezGene: | Kctd13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.70e-24 | 23 |
neuroblast (sensu Vertebrata) | 8.70e-24 | 23 |
neuron | 6.18e-16 | 33 |
neuronal stem cell | 6.18e-16 | 33 |
neuroblast | 6.18e-16 | 33 |
electrically signaling cell | 6.18e-16 | 33 |
neural cell | 1.93e-14 | 43 |
ectodermal cell | 6.09e-14 | 44 |
neurectodermal cell | 6.09e-14 | 44 |
electrically responsive cell | 1.86e-12 | 39 |
electrically active cell | 1.86e-12 | 39 |
embryonic cell | 7.20e-07 | 70 |