FFCP PHASE1:Mm9::chr7:16683923..16683934,+: Difference between revisions
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{{FFCP|EntrezGene=108124|HGNC=|MCL_coexpression_id=347|UniProt=|association_with_transcript=-22bp_to_ENSMUST00000127637_5end|description=CAGE_peak_2_at_Napa_5end|id=chr7:16683923..16683934,+|ontology_enrichment_celltype=CL:0000117!2.77e-14!23;CL:0000337!2.77e-14!23;CL:0002319!2.80e-13!43;CL:0000221!5.83e-13!44;CL:0000133!5.83e-13!44;CL:0000055!4.81e-12!50;CL:0000540!8.29e-11!33;CL:0000047!8.29e-11!33;CL:0000031!8.29e-11!33;CL:0000404!8.29e-11!33;CL:0000393!1.70e-10!39;CL:0000211!1.70e-10!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.73e-14,23;CL:0000337,2.73e-14,23;CL:0002319,2.76e-13,43;CL:0000221,5.74e-13,44;CL:0000133,5.74e-13,44;CL:0000540,8.18e-11,33;CL:0000047,8.18e-11,33;CL:0000031,8.18e-11,33;CL:0000404,8.18e-11,33;CL:0000393,1.68e-10,39;CL:0000211,1.68e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.40e-28!73;UBERON:0005743!1.40e-28!73;UBERON:0000073!2.69e-27!75;UBERON:0001016!2.69e-27!75;UBERON:0001049!3.23e-25!52;UBERON:0005068!3.23e-25!52;UBERON:0006241!3.23e-25!52;UBERON:0007135!3.23e-25!52;UBERON:0000955!2.01e-23!50;UBERON:0006238!2.01e-23!50;UBERON:0002616!4.70e-23!49;UBERON:0002346!1.31e-22!71;UBERON:0003075!1.31e-22!71;UBERON:0007284!1.31e-22!71;UBERON:0004121!3.08e-22!102;UBERON:0000924!3.08e-22!102;UBERON:0006601!3.08e-22!102;UBERON:0000033!1.91e-20!63;UBERON:0002020!9.95e-20!34;UBERON:0003080!3.29e-18!40;UBERON:0003056!5.09e-18!49;UBERON:0002780!9.85e-18!39;UBERON:0001890!9.85e-18!39;UBERON:0006240!9.85e-18!39;UBERON:0002791!2.12e-16!29;UBERON:0003528!2.12e-16!29;UBERON:0001893!2.12e-16!29;UBERON:0000956!7.22e-12!21;UBERON:0001869!7.22e-12!21;UBERON:0000203!7.22e-12!21;UBERON:0007811!1.40e-10!86;UBERON:0000153!6.19e-10!94;UBERON:0002619!9.82e-10!17;UBERON:0000025!5.96e-09!114;UBERON:0003076!1.36e-07!12;UBERON:0003057!1.36e-07!12;UBERON:0004111!2.50e-07!122;UBERON:0002021!3.86e-07!10;UBERON:0000411!3.86e-07!10;UBERON:0001950!3.86e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.35e-28,73;UBERON:0001016,2.60e-27,75;UBERON:0000073,1.33e-26,54;UBERON:0001049,3.12e-25,52;UBERON:0005068,3.12e-25,52;UBERON:0006241,3.12e-25,52;UBERON:0007135,3.12e-25,52;UBERON:0002346,1.62e-24,64;UBERON:0003075,1.62e-24,64;UBERON:0007284,1.62e-24,64;UBERON:0004121,1.85e-23,95;UBERON:0000924,1.85e-23,95;UBERON:0006601,1.85e-23,95;UBERON:0000955,1.69e-21,47;UBERON:0006238,1.69e-21,47;UBERON:0002616,3.89e-21,46;UBERON:0010371,8.05e-21,73;UBERON:0010314,3.84e-20,92;UBERON:0002020,9.71e-20,34;UBERON:0003080,3.22e-18,40;UBERON:0003056,4.97e-18,49;UBERON:0002780,9.63e-18,39;UBERON:0001890,9.63e-18,39;UBERON:0006240,9.63e-18,39;UBERON:0003528,2.08e-16,29;UBERON:0002791,2.08e-16,29;UBERON:0001893,2.08e-16,29;UBERON:0000956,7.12e-12,21;UBERON:0001869,7.12e-12,21;UBERON:0000203,7.12e-12,21;UBERON:0002619,9.71e-10,17;UBERON:0000025,5.53e-09,114;UBERON:0003076,1.35e-07,12;UBERON:0003057,1.35e-07,12;UBERON:0004111,2.30e-07,122;UBERON:0002021,3.83e-07,10;UBERON:0000411,3.83e-07,10;UBERON:0001950,3.83e-07,10|phase1_expression=2.40223270657191,1.74487703819681,0.909998478779072,1.51232105653415,1.00179145989269,0.671517087647559,1.86890112476421,2.06597317506522,1.12630977721333,0.70219357896598,1.88339765048055,1.11681022593471,2.73921167889929,1.66098764596095,0.999329285446988,1.61980213911861,1.39912375625629,2.05050407482854,2.60517423850904,2.54633791078818,4.16712121740242,0.893618560807968,2.08959831311148,0.799962113967033,0.91763712426868,0.57423196411502,2.58457197695445,2.15471232685889,0.950117097281869,1.26015064879965,1.10865255327652,1.27006134691926,3.69038872550742,0,0.866554859253824,1.66234645358492,1.02084678131185,1.25559489221072,1.5626706890476,0,2.94115744015507,4.09827290975067,0,3.27331726736501,3.64956952390252,3.30384153891027,16.4302182313088,6.32272953503295,7.0299578475031,6.9994763666742,7.97922603264566,7.18762821824858,3.52343472721246,2.17608642603403,3.02484419228218,2.57259436035947,4.58453503902011,4.64104883049698,9.3065571995415,11.6378015439847,11.4089652631112,12.5372476865579,10.6715375533337,5.39939830368839,4.94433181283487,7.8152812644071,6.2916023208865,8.06858441175265,10.7837196800817,11.6105106965254,9.25429829946081,15.996455126613,15.0190607847097,8.45186514583183,8.81778333367775,4.5960939330501,8.8092704799511,11.7472351038373,11.981309593987,10.0233578674947,9.5147149346506,8.85552729946492,14.5175159480718,11.8180148106653,13.9046405476897,13.5529149317887,9.96601765593721,9.87917062874093,2.42323818666189,2.04043212288321,2.31891590961342,0,1.3599426674155,3.2382191498269,0,1.79210754838934,1.96622188184453,2.55645483867087,3.37721805983729,3.18005617059306,2.81686839553361,2.56652954828636,2.54805239706646,7.11066703153331,1.94841936910093,2.78695852022608,1.51657333504435,1.48439043634778,1.8125651855302,2.82040064223167,2.4287945747259,3.34912026143355,4.38169444786511,2.86373017049983,3.41007250693544,2.13633205260448,3.70792451601561,2.16899035379867,3.5384422077995,4.20593809863264,1.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108124 | |||
|HGNC= | |||
|MCL_coexpression_id=347 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-22bp_to_ENSMUST00000127637_5end | |||
|cluster_id=chr7:16683923..16683934,+ | |||
|description=CAGE_peak_2_at_Napa_5end | |||
|id=chr7:16683923..16683934,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.77e-14!23;CL:0000337!2.77e-14!23;CL:0002319!2.80e-13!43;CL:0000221!5.83e-13!44;CL:0000133!5.83e-13!44;CL:0000055!4.81e-12!50;CL:0000540!8.29e-11!33;CL:0000047!8.29e-11!33;CL:0000031!8.29e-11!33;CL:0000404!8.29e-11!33;CL:0000393!1.70e-10!39;CL:0000211!1.70e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.73e-14,23;CL:0000337,2.73e-14,23;CL:0002319,2.76e-13,43;CL:0000221,5.74e-13,44;CL:0000133,5.74e-13,44;CL:0000540,8.18e-11,33;CL:0000047,8.18e-11,33;CL:0000031,8.18e-11,33;CL:0000404,8.18e-11,33;CL:0000393,1.68e-10,39;CL:0000211,1.68e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.40e-28!73;UBERON:0005743!1.40e-28!73;UBERON:0000073!2.69e-27!75;UBERON:0001016!2.69e-27!75;UBERON:0001049!3.23e-25!52;UBERON:0005068!3.23e-25!52;UBERON:0006241!3.23e-25!52;UBERON:0007135!3.23e-25!52;UBERON:0000955!2.01e-23!50;UBERON:0006238!2.01e-23!50;UBERON:0002616!4.70e-23!49;UBERON:0002346!1.31e-22!71;UBERON:0003075!1.31e-22!71;UBERON:0007284!1.31e-22!71;UBERON:0004121!3.08e-22!102;UBERON:0000924!3.08e-22!102;UBERON:0006601!3.08e-22!102;UBERON:0000033!1.91e-20!63;UBERON:0002020!9.95e-20!34;UBERON:0003080!3.29e-18!40;UBERON:0003056!5.09e-18!49;UBERON:0002780!9.85e-18!39;UBERON:0001890!9.85e-18!39;UBERON:0006240!9.85e-18!39;UBERON:0002791!2.12e-16!29;UBERON:0003528!2.12e-16!29;UBERON:0001893!2.12e-16!29;UBERON:0000956!7.22e-12!21;UBERON:0001869!7.22e-12!21;UBERON:0000203!7.22e-12!21;UBERON:0007811!1.40e-10!86;UBERON:0000153!6.19e-10!94;UBERON:0002619!9.82e-10!17;UBERON:0000025!5.96e-09!114;UBERON:0003076!1.36e-07!12;UBERON:0003057!1.36e-07!12;UBERON:0004111!2.50e-07!122;UBERON:0002021!3.86e-07!10;UBERON:0000411!3.86e-07!10;UBERON:0001950!3.86e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.35e-28,73;UBERON:0001016,2.60e-27,75;UBERON:0000073,1.33e-26,54;UBERON:0001049,3.12e-25,52;UBERON:0005068,3.12e-25,52;UBERON:0006241,3.12e-25,52;UBERON:0007135,3.12e-25,52;UBERON:0002346,1.62e-24,64;UBERON:0003075,1.62e-24,64;UBERON:0007284,1.62e-24,64;UBERON:0004121,1.85e-23,95;UBERON:0000924,1.85e-23,95;UBERON:0006601,1.85e-23,95;UBERON:0000955,1.69e-21,47;UBERON:0006238,1.69e-21,47;UBERON:0002616,3.89e-21,46;UBERON:0010371,8.05e-21,73;UBERON:0010314,3.84e-20,92;UBERON:0002020,9.71e-20,34;UBERON:0003080,3.22e-18,40;UBERON:0003056,4.97e-18,49;UBERON:0002780,9.63e-18,39;UBERON:0001890,9.63e-18,39;UBERON:0006240,9.63e-18,39;UBERON:0003528,2.08e-16,29;UBERON:0002791,2.08e-16,29;UBERON:0001893,2.08e-16,29;UBERON:0000956,7.12e-12,21;UBERON:0001869,7.12e-12,21;UBERON:0000203,7.12e-12,21;UBERON:0002619,9.71e-10,17;UBERON:0000025,5.53e-09,114;UBERON:0003076,1.35e-07,12;UBERON:0003057,1.35e-07,12;UBERON:0004111,2.30e-07,122;UBERON:0002021,3.83e-07,10;UBERON:0000411,3.83e-07,10;UBERON:0001950,3.83e-07,10 | |||
|phase1_expression=2.40223270657191,1.74487703819681,0.909998478779072,1.51232105653415,1.00179145989269,0.671517087647559,1.86890112476421,2.06597317506522,1.12630977721333,0.70219357896598,1.88339765048055,1.11681022593471,2.73921167889929,1.66098764596095,0.999329285446988,1.61980213911861,1.39912375625629,2.05050407482854,2.60517423850904,2.54633791078818,4.16712121740242,0.893618560807968,2.08959831311148,0.799962113967033,0.91763712426868,0.57423196411502,2.58457197695445,2.15471232685889,0.950117097281869,1.26015064879965,1.10865255327652,1.27006134691926,3.69038872550742,0,0.866554859253824,1.66234645358492,1.02084678131185,1.25559489221072,1.5626706890476,0,2.94115744015507,4.09827290975067,0,3.27331726736501,3.64956952390252,3.30384153891027,16.4302182313088,6.32272953503295,7.0299578475031,6.9994763666742,7.97922603264566,7.18762821824858,3.52343472721246,2.17608642603403,3.02484419228218,2.57259436035947,4.58453503902011,4.64104883049698,9.3065571995415,11.6378015439847,11.4089652631112,12.5372476865579,10.6715375533337,5.39939830368839,4.94433181283487,7.8152812644071,6.2916023208865,8.06858441175265,10.7837196800817,11.6105106965254,9.25429829946081,15.996455126613,15.0190607847097,8.45186514583183,8.81778333367775,4.5960939330501,8.8092704799511,11.7472351038373,11.981309593987,10.0233578674947,9.5147149346506,8.85552729946492,14.5175159480718,11.8180148106653,13.9046405476897,13.5529149317887,9.96601765593721,9.87917062874093,2.42323818666189,2.04043212288321,2.31891590961342,0,1.3599426674155,3.2382191498269,0,1.79210754838934,1.96622188184453,2.55645483867087,3.37721805983729,3.18005617059306,2.81686839553361,2.56652954828636,2.54805239706646,7.11066703153331,1.94841936910093,2.78695852022608,1.51657333504435,1.48439043634778,1.8125651855302,2.82040064223167,2.4287945747259,3.34912026143355,4.38169444786511,2.86373017049983,3.41007250693544,2.13633205260448,3.70792451601561,2.16899035379867,3.5384422077995,4.20593809863264,1.32504911076236,0.969750506270444,3.72783522436244,5.27005434620785,6.70229461803056,1.27728527604296,0.958520996047362,2.39961092397363,1.14363204365758,7.33974133083631,5.94750783664214,9.42407640846483,7.64827008846016,7.16003280524926,4.98691306942944,5.51620294430376,4.58277137326423,3.4833951770826,6.06534620240819,2.31486041475121,2.99277018814219,4.36813998423599,4.50155324513373,4.52114453507145,4.01415344992834,4.74020765053944,4.2165776051878,3.88055056108524,1.72454394346274,2.26927296201383,4.75068035242662,3.72632745126877,3.89266148915837,2.089512999133,5.14455341019859,2.38841120182192,1.40442637462647,3.60287069960601,1.42081749697796,3.93538967817454,4.92504725960302,4.14142741360334,4.97163944728941,4.13204886669548,3.08534225774756,2.55787339225449,2.95100741539581,3.03589890154641,2.79751744852917,3.94001913789829,2.59420190546738,3.07019973593198,2.63460138349261,2.01309628140558,9.04246778825747,5.45394445610208,0.330418782983798,1.85115396664481,4.90562976231038,3.0190767341857,2.44848176511977,2.8235693447268,2.00140239460383,1.14135375667535,0.949058123089023,1.64698954724011,2.5133520880027,1.79060824837036,3.70431765526328,0.898819408654221,0.864552199498777,0.597423819763102,2.84501851429623,2.51346727741403,1.1270773567308,3.05476991767971,3.87904974335251,1.47285221769669,2.97211724484009,1.47610147979602,1.56998727841375,1.35736880313981,0.889357881261447,2.50267658574141,2.16214894624523,2.24862112384854,1.01430060694251,2.65294875727659,1.52775511068852,0.863088412352432,1.45921704097532,1.64736847912849,1.43768206527355,1.86070473834252,3.12037673114561,2.02063102357689,2.69096120282868,0.964887042726734,2.58654466233247,5.11626811780309,2.93336957595647,3.05541154395339,4.22442446919304,1.84256883185997,1.90434912708811,2.34160377429359,2.20689201748667,3.5434350343804,3.50800491046472,2.13022309130459,2.41758974612254,1.73578870297814,3.01582567878545,2.71952841909355,0,0.275936746304732,10.9174401191699,5.97779601620236,3.11476396215683,4.29200576247434,2.83957397474631,4.68526493155966,2.80050417052639,2.15071918157297,3.7875774594007,3.39691836946599,1.61924280669958,4.09158201075837,3.95287777946523,5.46246237917072,2.83880170416537,5.34196811001766,3.09485222771795,2.14461159864296,1.32745138339963,3.39892890616974,3.32555912661226,0.943025398779491,2.36241514304618,4.61152721915891,2.32585463851399,3.27180356529755,3.56497378384721,1.8962205476149,1.05418608574999,4.12542172992747,6.80879211507576,4.14140516272013,4.01011919726539,4.92975180572662,8.51233121482913,3.38900753443934,2.79733335023606,6.39376393140658,1.64270195644597,4.66030555900404,3.08739757276947,5.11147384118588,2.74489525383039,3.07595917133595,3.34242563208782,3.11867709515616,0.582961673259701,9.82754100655701,0.512612642393558,4.12773735926445,2.40752885580625,1.88368457004691,1.0935538217682,2.97411625168479,2.20971958992012,2.23922323717853,0.967399816630967,0.954670618015114,3.16335993581135,1.82987520414164,3.34816556547584,4.18176592028937,3.05707589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| |||
|short_description=p2@Napa | |||
}} |
Latest revision as of 06:50, 26 September 2015
Short description: | p2@Napa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Napa_5end |
Coexpression cluster: | MCL_coexpression_mm9:347 |
Association with transcript: | -22bp_to_ENSMUST00000127637_5end |
EntrezGene: | Napa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.73e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.73e-14 | 23 |
neural cell | 2.76e-13 | 43 |
ectodermal cell | 5.74e-13 | 44 |
neurectodermal cell | 5.74e-13 | 44 |
neuron | 8.18e-11 | 33 |
neuronal stem cell | 8.18e-11 | 33 |
neuroblast | 8.18e-11 | 33 |
electrically signaling cell | 8.18e-11 | 33 |
electrically responsive cell | 1.68e-10 | 39 |
electrically active cell | 1.68e-10 | 39 |