FFCP PHASE1:Mm9::chr7:52970550..52970582,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=56632|HGNC=|MCL_coexpression_id=24|UniProt=Q9JIA7,Q58E38|association_with_transcript=0bp_to_ENSMUST00000072836,NM_020011,uc009gwt.2_5end|description=CAGE_peak_2_at_Sphk2_5end|id=chr7:52970550..52970582,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.37e-16!43;UBERON:0005409!7.30e-13!59;UBERON:0000344!1.02e-09!15;UBERON:0001242!9.48e-09!13;UBERON:0000060!9.48e-09!13;UBERON:0001262!9.48e-09!13;UBERON:0004786!9.48e-09!13;UBERON:0001007!1.20e-08!128;UBERON:0001555!1.20e-08!128;UBERON:0007026!1.20e-08!128;UBERON:0004119!2.85e-08!130;UBERON:0000925!2.85e-08!130;UBERON:0006595!2.85e-08!130;UBERON:0007023!4.77e-08!51;UBERON:0004921!5.92e-08!126;UBERON:0004185!5.92e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.60e-15,31;UBERON:0005409,6.07e-11,47;UBERON:0000344,1.02e-09,15;UBERON:0001242,9.45e-09,13;UBERON:0001262,9.45e-09,13;UBERON:0004786,9.45e-09,13;UBERON:0007023,4.48e-08,51;UBERON:0001007,9.05e-07,116;UBERON:0001555,9.05e-07,116;UBERON:0007026,9.05e-07,116|phase1_expression=4.32401887182944,39.4342210632478,36.3999391511629,61.7026991065933,74.1325680320594,15.6127722878058,15.6520469199002,4.51931632045517,2.67498572088167,3.27690336850791,1.88339765048055,2.87179772383211,6.33442700745461,4.28359971853087,0.666219523631325,2.22722794128809,0.699561878128147,3.62781490161973,4.2505474417779,6.36584477697045,6.03807360072595,3.47518329203099,4.17919662622297,13.9193407830264,8.94696196161963,20.0981187440257,15.9381938578858,20.0388246397877,16.3420140732482,16.6339885641554,8.20402889424627,2.54012269383853,3.07532393792285,0,10.9763615505484,6.15068187826422,10.4126371693808,3.76678467663217,1.5626706890476,3.14114246384279,7.64700934440319,9.56263678941824,7.2826552954673,3.02152363141385,1.82478476195126,2.75320128242522,3.9119567217402,7.19483016055474,5.4921545683618,3.69416808241138,3.77963338388479,10.062679505548,5.03347818173209,2.90144856804538,5.71359458542189,2.82985379639542,3.72493471920384,5.15672092277442,3.84401275633236,2.11596391708813,3.80298842103708,2.71075625655306,5.33576877666684,4.94944844504769,1.97773272513395,2.8419204597844,5.99200221036809,5.37905627450176,2.48855069540346,3.51015439662396,3.99617426567626,3.42781181284564,4.19650227808066,2.32732518508413,3.64212789869298,1.83843757322004,3.30347642998166,2.29837208553338,2.4577045320999,3.69281605644543,4.57438218012048,2.08365348222704,3.07101298901519,3.93933827022176,6.26472815884921,1.47314292736834,3.98640706237488,2.42319279572891,2.49896437999507,5.06329452715463,2.89864488701678,5.16254326188832,2.03991400112325,24.8263468153396,9.09686984426737,15.6809410484067,7.72444310724635,2.89731548382698,0.519572009205738,0.35333957451034,5.21120653173718,1.28326477414318,0,7.11066703153331,0.432982082022428,1.01343946190039,1.01104889002957,11.418387971906,5.95557132388495,5.04703272820404,3.81667718885499,2.43572382649713,1.84492397804847,2.11011696773672,1.88141931417128,6.40899615781345,7.41584903203122,5.20557684911682,5.30766331169925,0.647067399789637,1.76673214768315,0.969750506270444,14.9113408974498,6.14839673724249,5.23616767033638,17.8819938646014,2.03685711660064,0.599902730993408,2.28726408731516,5.69204429738326,6.40500843946077,3.26701315493447,5.56237824615285,6.39288643325826,3.53239675751252,4.2182728397617,2.13862664085664,3.4833951770826,10.6143558542143,7.15502310014011,3.6433724029557,2.06911893990126,2.70093194708024,2.71268672104287,1.76894897793452,1.7935920839879,2.34254311399322,5.95017752699736,6.03590380211958,3.9712276835242,4.92663147659057,1.97276159184817,2.78047249225598,1.39300866608867,2.05782136407943,3.98068533636986,2.80885274925294,2.57347907114715,2.55747149456033,1.65700618028402,1.17263029990548,1.80062061461015,1.65721314909647,0.983821158737019,1.23413690309903,1.39520366850245,3.75582761959467,2.56883753207773,2.30383789878873,2.13417703302824,3.64809642956351,4.23979963533464,3.07370161407471,4.42881181909227,5.88811855979556,4.01327988279209,39.9806727410396,16.3959351331397,2.98603550749328,3.25131340604614,4.51036114627327,9.07575860805041,7.33847544688072,8.17970192284004,16.6085171540579,7.08205505313247,7.03738584640755,8.75408476981064,10.5280607044325,16.178749355776,13.400559092231,19.1175622324193,1.89667900953082,2.85621281524322,5.63538678365402,3.46207257337034,4.26695471768777,3.64706263429657,4.17361145020098,10.1851002105925,7.53593893638599,10.3653617694312,11.5616524563988,0.83422552858047,0.786235980452812,1.34917267430912,2.23146133527353,3.37648023653384,2.80088436959562,3.16465751195892,9.07957269940198,4.11842119782122,2.87536413054709,13.0249331683976,7.17686648163489,17.9331003342449,12.19902411949,31.3588288886189,7.57488079683079,2.08440552947533,3.09633455239849,1.18821560042632,1.40814148973101,5.02518772325447,5.47500374037832,6.24427673144956,2.67979744980525,2.6575762757853,3.02964060449226,6.06294264448231,5.87128938344045,5.20736610893442,1.50791283939272,0.54390568381871,1.96705709207614,2.75936746304733,5.13761887960934,5.97779601620236,2.29508923527346,3.53459298086122,1.57754109708128,2.34263246577983,3.23135096599198,1.43381278771531,2.45078541490634,0.849229592366497,2.42886421004937,1.46127928955656,1.18586333383957,6.10510501201433,6.81312408999689,3.91744328067962,2.93196526836437,6.92874516484649,6.63725691699814,4.61283208694465,4.23252979750651,3.77210159511796,5.90603785761546,6.45613810682248,6.71913562237375,4.72593848320757,4.9909632973861,6.0046984007805,7.37930260024991,6.18813259489121,6.80879211507576,3.06103859853227,4.01011919726539,3.21505552547388,6.20690817747958,4.45922044005176,7.56925494769756,9.43841342255258,0.23467170806371,4.87213762986786,7.49796553386871,9.8931751764888,3.06782410722221,4.76472106932431,5.13301079213487,7.38634048852776,15.1570035047522,5.00648315428376,3.07567585436135,2.27025554759545,1.29636169158798,1.50694765603753,1.23024804948923,2.28778173206523,1.18984900995699,0.979660166265606,2.3493995546752,8.59203556213602,4.74503990371703,4.26970880966382,5.72428306355547,3.3454127362315,5.8957892211468,4.85511646985355,5.70308844504818,6.02038666563268,15.8130267415987,9.94142900939081,3.38215763210514,5.98066184175915,6.6183396182839,4.86127970860119,2.45403664607689,3.8859908862879,3.16864544343536,5.4685841634459,10.8005124758482,8.69702834973622,8.92893019399383,3.47612232690996,1.41907650703115,2.05421914329655,2.98817892848929,3.04345382634718,4.17230845040656,3.12508168751919,2.65841148914239,2.1202954489111,3.81034033274999,3.12561173924206,4.38560463328886,6.25376970662141,5.37633750035217,7.25537227568676,0.665957860122194,0.358855426437903,1.17519231454855,5.02292944483695,2.62755465631655,4.02933573387983,5.35920947697665,8.02515366456581,5.64751842617067,1.38097570952153,1.71868654031819,3.43706364687375,4.11049511862385,0.755393897389701,2.02506750069542,2.2516060161211,2.26571204492102,3.10656187051092,2.90604573235695,2.39414924040619,2.90247129782028,4.37592090722929,1.46729213839588,2.75765262675021,2.22246727801615,2.88449080134452,3.20919209591815,3.28506375292937,3.29523089857312,3.39527414494937,3.55837728385553,3.58540853467268,3.27382173046996,3.81034953026459,3.36064545240081,3.47236596834669,5.76920261124629,2.94397840268795,2.74295401908332,2.8396128985494,3.09967046931517,2.90692833264657,3.76437521661322,2.45382362885862,2.19513567447327,3.41990624869196,3.53090695999241,3.92799590160417,3.32178050747688,3.25064791839359,1.22769312950907,2.63392630016142,3.2794123866794,6.74488560432454,4.67863216890817,3.86767897286937,4.01705497344571,2.8676884485537,0.927471342481686|short_description=p2@Sphk2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56632 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JIA7,Q58E38 | |||
|association_with_transcript=0bp_to_ENSMUST00000072836,NM_020011,uc009gwt.2_5end | |||
|cluster_id=chr7:52970550..52970582,- | |||
|description=CAGE_peak_2_at_Sphk2_5end | |||
|id=chr7:52970550..52970582,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.37e-16!43;UBERON:0005409!7.30e-13!59;UBERON:0000344!1.02e-09!15;UBERON:0001242!9.48e-09!13;UBERON:0000060!9.48e-09!13;UBERON:0001262!9.48e-09!13;UBERON:0004786!9.48e-09!13;UBERON:0001007!1.20e-08!128;UBERON:0001555!1.20e-08!128;UBERON:0007026!1.20e-08!128;UBERON:0004119!2.85e-08!130;UBERON:0000925!2.85e-08!130;UBERON:0006595!2.85e-08!130;UBERON:0007023!4.77e-08!51;UBERON:0004921!5.92e-08!126;UBERON:0004185!5.92e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.60e-15,31;UBERON:0005409,6.07e-11,47;UBERON:0000344,1.02e-09,15;UBERON:0001242,9.45e-09,13;UBERON:0001262,9.45e-09,13;UBERON:0004786,9.45e-09,13;UBERON:0007023,4.48e-08,51;UBERON:0001007,9.05e-07,116;UBERON:0001555,9.05e-07,116;UBERON:0007026,9.05e-07,116 | |||
|phase1_expression=4.32401887182944,39.4342210632478,36.3999391511629,61.7026991065933,74.1325680320594,15.6127722878058,15.6520469199002,4.51931632045517,2.67498572088167,3.27690336850791,1.88339765048055,2.87179772383211,6.33442700745461,4.28359971853087,0.666219523631325,2.22722794128809,0.699561878128147,3.62781490161973,4.2505474417779,6.36584477697045,6.03807360072595,3.47518329203099,4.17919662622297,13.9193407830264,8.94696196161963,20.0981187440257,15.9381938578858,20.0388246397877,16.3420140732482,16.6339885641554,8.20402889424627,2.54012269383853,3.07532393792285,0,10.9763615505484,6.15068187826422,10.4126371693808,3.76678467663217,1.5626706890476,3.14114246384279,7.64700934440319,9.56263678941824,7.2826552954673,3.02152363141385,1.82478476195126,2.75320128242522,3.9119567217402,7.19483016055474,5.4921545683618,3.69416808241138,3.77963338388479,10.062679505548,5.03347818173209,2.90144856804538,5.71359458542189,2.82985379639542,3.72493471920384,5.15672092277442,3.84401275633236,2.11596391708813,3.80298842103708,2.71075625655306,5.33576877666684,4.94944844504769,1.97773272513395,2.8419204597844,5.99200221036809,5.37905627450176,2.48855069540346,3.51015439662396,3.99617426567626,3.42781181284564,4.19650227808066,2.32732518508413,3.64212789869298,1.83843757322004,3.30347642998166,2.29837208553338,2.4577045320999,3.69281605644543,4.57438218012048,2.08365348222704,3.07101298901519,3.93933827022176,6.26472815884921,1.47314292736834,3.98640706237488,2.42319279572891,2.49896437999507,5.06329452715463,2.89864488701678,5.16254326188832,2.03991400112325,24.8263468153396,9.09686984426737,15.6809410484067,7.72444310724635,2.89731548382698,0.519572009205738,0.35333957451034,5.21120653173718,1.28326477414318,0,7.11066703153331,0.432982082022428,1.01343946190039,1.01104889002957,11.418387971906,5.95557132388495,5.04703272820404,3.81667718885499,2.43572382649713,1.84492397804847,2.11011696773672,1.88141931417128,6.40899615781345,7.41584903203122,5.20557684911682,5.30766331169925,0.647067399789637,1.76673214768315,0.969750506270444,14.9113408974498,6.14839673724249,5.23616767033638,17.8819938646014,2.03685711660064,0.599902730993408,2.28726408731516,5.69204429738326,6.40500843946077,3.26701315493447,5.56237824615285,6.39288643325826,3.53239675751252,4.2182728397617,2.13862664085664,3.4833951770826,10.6143558542143,7.15502310014011,3.6433724029557,2.06911893990126,2.70093194708024,2.71268672104287,1.76894897793452,1.7935920839879,2.34254311399322,5.95017752699736,6.03590380211958,3.9712276835242,4.92663147659057,1.97276159184817,2.78047249225598,1.39300866608867,2.05782136407943,3.98068533636986,2.80885274925294,2.57347907114715,2.55747149456033,1.65700618028402,1.17263029990548,1.80062061461015,1.65721314909647,0.983821158737019,1.23413690309903,1.39520366850245,3.75582761959467,2.56883753207773,2.30383789878873,2.13417703302824,3.64809642956351,4.23979963533464,3.07370161407471,4.42881181909227,5.88811855979556,4.01327988279209,39.9806727410396,16.3959351331397,2.98603550749328,3.25131340604614,4.51036114627327,9.07575860805041,7.33847544688072,8.17970192284004,16.6085171540579,7.08205505313247,7.03738584640755,8.75408476981064,10.5280607044325,16.178749355776,13.400559092231,19.1175622324193,1.89667900953082,2.85621281524322,5.63538678365402,3.46207257337034,4.26695471768777,3.64706263429657,4.17361145020098,10.1851002105925,7.53593893638599,10.3653617694312,11.5616524563988,0.83422552858047,0.786235980452812,1.34917267430912,2.23146133527353,3.37648023653384,2.80088436959562,3.16465751195892,9.07957269940198,4.11842119782122,2.87536413054709,13.0249331683976,7.17686648163489,17.9331003342449,12.19902411949,31.3588288886189,7.57488079683079,2.08440552947533,3.09633455239849,1.18821560042632,1.40814148973101,5.02518772325447,5.47500374037832,6.24427673144956,2.67979744980525,2.6575762757853,3.02964060449226,6.06294264448231,5.87128938344045,5.20736610893442,1.50791283939272,0.54390568381871,1.96705709207614,2.75936746304733,5.13761887960934,5.97779601620236,2.29508923527346,3.53459298086122,1.57754109708128,2.34263246577983,3.23135096599198,1.43381278771531,2.45078541490634,0.849229592366497,2.42886421004937,1.46127928955656,1.18586333383957,6.10510501201433,6.81312408999689,3.91744328067962,2.93196526836437,6.92874516484649,6.63725691699814,4.61283208694465,4.23252979750651,3.77210159511796,5.90603785761546,6.45613810682248,6.71913562237375,4.72593848320757,4.9909632973861,6.0046984007805,7.37930260024991,6.18813259489121,6.80879211507576,3.06103859853227,4.01011919726539,3.21505552547388,6.20690817747958,4.45922044005176,7.56925494769756,9.43841342255258,0.23467170806371,4.87213762986786,7.49796553386871,9.8931751764888,3.06782410722221,4.76472106932431,5.13301079213487,7.38634048852776,15.1570035047522,5.00648315428376,3.07567585436135,2.27025554759545,1.29636169158798,1.50694765603753,1.23024804948923,2.28778173206523,1.18984900995699,0.979660166265606,2.3493995546752,8.59203556213602,4.74503990371703,4.26970880966382,5.72428306355547,3.3454127362315,5.8957892211468,4.85511646985355,5.70308844504818,6.02038666563268,15.8130267415987,9.94142900939081,3.38215763210514,5.98066184175915,6.6183396182839,4.86127970860119,2.45403664607689,3.8859908862879,3.16864544343536,5.4685841634459,10.8005124758482,8.69702834973622,8.92893019399383,3.47612232690996,1.41907650703115,2.05421914329655,2.98817892848929,3.04345382634718,4.17230845040656,3.12508168751919,2.65841148914239,2.1202954489111,3.81034033274999,3.12561173924206,4.38560463328886,6.25376970662141,5.37633750035217,7.25537227568676,0.665957860122194,0.358855426437903,1.17519231454855,5.02292944483695,2.62755465631655,4.02933573387983,5.35920947697665,8.02515366456581,5.64751842617067,1.38097570952153,1.71868654031819,3.43706364687375,4.11049511862385,0.755393897389701,2.02506750069542,2.2516060161211,2.26571204492102,3.10656187051092,2.90604573235695,2.39414924040619,2.90247129782028,4.37592090722929,1.46729213839588,2.75765262675021,2.22246727801615,2.88449080134452,3.20919209591815,3.28506375292937,3.29523089857312,3.39527414494937,3.55837728385553,3.58540853467268,3.27382173046996,3.81034953026459,3.36064545240081,3.47236596834669,5.76920261124629,2.94397840268795,2.74295401908332,2.8396128985494,3.09967046931517,2.90692833264657,3.76437521661322,2.45382362885862,2.19513567447327,3.41990624869196,3.53090695999241,3.92799590160417,3.32178050747688,3.25064791839359,1.22769312950907,2.63392630016142,3.2794123866794,6.74488560432454,4.67863216890817,3.86767897286937,4.01705497344571,2.8676884485537,0.927471342481686 | |||
|short_description=p2@Sphk2 | |||
}} |
Latest revision as of 21:47, 26 September 2015
Short description: | p2@Sphk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sphk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000072836, NM_020011, uc009gwt.2_5end |
EntrezGene: | Sphk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 9.60e-15 | 31 |
gastrointestinal system | 6.07e-11 | 47 |
mucosa | 1.02e-09 | 15 |
intestinal mucosa | 9.45e-09 | 13 |
wall of intestine | 9.45e-09 | 13 |
gastrointestinal system mucosa | 9.45e-09 | 13 |
adult organism | 4.48e-08 | 51 |
digestive system | 9.05e-07 | 116 |
digestive tract | 9.05e-07 | 116 |
primitive gut | 9.05e-07 | 116 |