FFCP PHASE1:Mm9::chrX:133527820..133527847,+: Difference between revisions
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{{FFCP|EntrezGene=66995|HGNC=|MCL_coexpression_id=1|UniProt=Q8VD24|association_with_transcript=0bp_to_ENSMUST00000033804_5end|description=CAGE_peak_3_at_Zcchc18_5end|id=chrX:133527820..133527847,+|ontology_enrichment_celltype=CL:0000221!8.20e-13!44;CL:0000133!8.20e-13!44;CL:0000540!1.06e-12!33;CL:0000047!1.06e-12!33;CL:0000031!1.06e-12!33;CL:0000404!1.06e-12!33;CL:0002319!1.62e-12!43;CL:0000117!2.56e-12!23;CL:0000337!2.56e-12!23;CL:0000393!6.05e-09!39;CL:0000211!6.05e-09!39;CL:0000055!9.04e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.19e-15,23;CL:0000337,5.19e-15,23;CL:0000221,2.69e-14,44;CL:0000133,2.69e-14,44;CL:0002319,6.23e-14,43;CL:0000540,8.01e-14,33;CL:0000047,8.01e-14,33;CL:0000031,8.01e-14,33;CL:0000404,8.01e-14,33;CL:0000393,5.19e-10,39;CL:0000211,5.19e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.78e-35!73;UBERON:0005743!5.78e-35!73;UBERON:0002346!1.04e-33!71;UBERON:0003075!1.04e-33!71;UBERON:0007284!1.04e-33!71;UBERON:0000073!1.63e-33!75;UBERON:0001016!1.63e-33!75;UBERON:0004121!3.90e-30!102;UBERON:0000924!3.90e-30!102;UBERON:0006601!3.90e-30!102;UBERON:0001049!5.16e-29!52;UBERON:0005068!5.16e-29!52;UBERON:0006241!5.16e-29!52;UBERON:0007135!5.16e-29!52;UBERON:0000033!3.17e-28!63;UBERON:0000955!9.23e-27!50;UBERON:0006238!9.23e-27!50;UBERON:0003056!2.70e-26!49;UBERON:0002616!4.41e-26!49;UBERON:0003080!7.75e-24!40;UBERON:0002780!3.63e-23!39;UBERON:0001890!3.63e-23!39;UBERON:0006240!3.63e-23!39;UBERON:0002020!7.19e-21!34;UBERON:0002791!1.78e-17!29;UBERON:0003528!1.78e-17!29;UBERON:0001893!1.78e-17!29;UBERON:0000153!7.37e-16!94;UBERON:0007811!1.87e-15!86;UBERON:0000956!1.29e-12!21;UBERON:0001869!1.29e-12!21;UBERON:0000203!1.29e-12!21;UBERON:0002619!2.53e-11!17;UBERON:0002021!3.41e-08!10;UBERON:0000411!3.41e-08!10;UBERON:0001950!3.41e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.21e-41,73;UBERON:0002346,4.98e-40,64;UBERON:0003075,4.98e-40,64;UBERON:0007284,4.98e-40,64;UBERON:0001016,9.56e-40,75;UBERON:0000073,3.19e-37,54;UBERON:0001049,2.65e-36,52;UBERON:0005068,2.65e-36,52;UBERON:0006241,2.65e-36,52;UBERON:0007135,2.65e-36,52;UBERON:0004121,5.55e-36,95;UBERON:0000924,5.55e-36,95;UBERON:0006601,5.55e-36,95;UBERON:0010371,1.51e-34,73;UBERON:0003056,5.14e-32,49;UBERON:0000955,8.10e-32,47;UBERON:0006238,8.10e-32,47;UBERON:0002616,5.64e-31,46;UBERON:0003080,1.95e-29,40;UBERON:0002780,1.35e-28,39;UBERON:0001890,1.35e-28,39;UBERON:0006240,1.35e-28,39;UBERON:0010314,1.87e-27,92;UBERON:0002020,1.02e-25,34;UBERON:0003528,1.81e-21,29;UBERON:0002791,1.81e-21,29;UBERON:0001893,1.81e-21,29;UBERON:0000956,2.19e-15,21;UBERON:0001869,2.19e-15,21;UBERON:0000203,2.19e-15,21;UBERON:0002619,9.12e-14,17;UBERON:0002021,7.39e-10,10;UBERON:0000411,7.39e-10,10;UBERON:0001950,7.39e-10,10;UBERON:0001894,7.18e-08,10;UBERON:0006222,7.18e-08,10;UBERON:0002420,3.09e-07,8;UBERON:0007245,3.09e-07,8;UBERON:0010009,3.09e-07,8;UBERON:0010011,3.09e-07,8;UBERON:0000454,3.09e-07,8;UBERON:0003076,3.31e-07,12;UBERON:0003057,3.31e-07,12|phase1_expression=5.76535849577258,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0,0,0,0,0.262261207256992,0,0,0,0.473193248037357,0.822686601634433,0.84877930359606,3.82694805679814,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,1.30815093828268,3.29529274101708,5.05517737593137,2.09979632438044,2.87505128729943,0.503347818173209,0.725362142011344,0.336093799142464,0,0,0,9.71119012126069,15.340738398889,12.0427966666174,0,0,0,0,0.7104801149461,1.19840044207362,6.91592949578798,1.76272340924412,3.64516033495565,3.15487442027073,23.9946826899195,26.283356373242,4.16468717330844,4.02550978276593,7.35375029288017,2.20231761998777,10.9811110753261,8.1411462625809,12.924856197559,18.2975287204819,11.4600941522487,7.2587579740359,14.6318278608237,13.2934475565825,19.1508580557884,17.0846016958924,13.6071595452469,0,0.226714680320357,0,0,0,0,0,0,1.26399978118577,0,0,0,2.81686839553361,0,0,0,0,0,0,0.45673551887624,0.258937883647172,1.03909497345377,2.77576522825817,2.13125834818499,1.84492397804847,3.61734337326294,3.76283862834255,0.502666365318702,0,0.144599356919912,0,0,0,0,0,6.14839673724249,7.54008144528438,0,0,0,0,18.1246673679835,42.5475560621323,21.7382029155255,28.3333641913411,21.9915293304084,23.6878370797899,26.2830846169767,0.916554274652847,0,0.252722758433675,0.210441855886474,4.81445638962004,4.13823787980251,3.06105620669094,3.31550599238573,4.62648194229029,3.33095672740609,3.93547243150861,2.32833033665114,2.37124792226126,2.08016688184601,0.703804496655795,0.657587197282725,1.39023624612799,0.696504333044333,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,27.7582732104648,20.8896363129947,0,0.264450566663544,0.639864751605702,1.85789337488351,1.03093969057675,0.403367049246685,0,1.33157938278791,0.474529061544512,1.4822905925161,0.251335208800269,1.39269530428806,0.779856348476481,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66995 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VD24 | |||
|association_with_transcript=0bp_to_ENSMUST00000033804_5end | |||
|cluster_id=chrX:133527820..133527847,+ | |||
|description=CAGE_peak_3_at_Zcchc18_5end | |||
|id=chrX:133527820..133527847,+ | |||
|ontology_enrichment_celltype=CL:0000221!8.20e-13!44;CL:0000133!8.20e-13!44;CL:0000540!1.06e-12!33;CL:0000047!1.06e-12!33;CL:0000031!1.06e-12!33;CL:0000404!1.06e-12!33;CL:0002319!1.62e-12!43;CL:0000117!2.56e-12!23;CL:0000337!2.56e-12!23;CL:0000393!6.05e-09!39;CL:0000211!6.05e-09!39;CL:0000055!9.04e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.19e-15,23;CL:0000337,5.19e-15,23;CL:0000221,2.69e-14,44;CL:0000133,2.69e-14,44;CL:0002319,6.23e-14,43;CL:0000540,8.01e-14,33;CL:0000047,8.01e-14,33;CL:0000031,8.01e-14,33;CL:0000404,8.01e-14,33;CL:0000393,5.19e-10,39;CL:0000211,5.19e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.78e-35!73;UBERON:0005743!5.78e-35!73;UBERON:0002346!1.04e-33!71;UBERON:0003075!1.04e-33!71;UBERON:0007284!1.04e-33!71;UBERON:0000073!1.63e-33!75;UBERON:0001016!1.63e-33!75;UBERON:0004121!3.90e-30!102;UBERON:0000924!3.90e-30!102;UBERON:0006601!3.90e-30!102;UBERON:0001049!5.16e-29!52;UBERON:0005068!5.16e-29!52;UBERON:0006241!5.16e-29!52;UBERON:0007135!5.16e-29!52;UBERON:0000033!3.17e-28!63;UBERON:0000955!9.23e-27!50;UBERON:0006238!9.23e-27!50;UBERON:0003056!2.70e-26!49;UBERON:0002616!4.41e-26!49;UBERON:0003080!7.75e-24!40;UBERON:0002780!3.63e-23!39;UBERON:0001890!3.63e-23!39;UBERON:0006240!3.63e-23!39;UBERON:0002020!7.19e-21!34;UBERON:0002791!1.78e-17!29;UBERON:0003528!1.78e-17!29;UBERON:0001893!1.78e-17!29;UBERON:0000153!7.37e-16!94;UBERON:0007811!1.87e-15!86;UBERON:0000956!1.29e-12!21;UBERON:0001869!1.29e-12!21;UBERON:0000203!1.29e-12!21;UBERON:0002619!2.53e-11!17;UBERON:0002021!3.41e-08!10;UBERON:0000411!3.41e-08!10;UBERON:0001950!3.41e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.21e-41,73;UBERON:0002346,4.98e-40,64;UBERON:0003075,4.98e-40,64;UBERON:0007284,4.98e-40,64;UBERON:0001016,9.56e-40,75;UBERON:0000073,3.19e-37,54;UBERON:0001049,2.65e-36,52;UBERON:0005068,2.65e-36,52;UBERON:0006241,2.65e-36,52;UBERON:0007135,2.65e-36,52;UBERON:0004121,5.55e-36,95;UBERON:0000924,5.55e-36,95;UBERON:0006601,5.55e-36,95;UBERON:0010371,1.51e-34,73;UBERON:0003056,5.14e-32,49;UBERON:0000955,8.10e-32,47;UBERON:0006238,8.10e-32,47;UBERON:0002616,5.64e-31,46;UBERON:0003080,1.95e-29,40;UBERON:0002780,1.35e-28,39;UBERON:0001890,1.35e-28,39;UBERON:0006240,1.35e-28,39;UBERON:0010314,1.87e-27,92;UBERON:0002020,1.02e-25,34;UBERON:0003528,1.81e-21,29;UBERON:0002791,1.81e-21,29;UBERON:0001893,1.81e-21,29;UBERON:0000956,2.19e-15,21;UBERON:0001869,2.19e-15,21;UBERON:0000203,2.19e-15,21;UBERON:0002619,9.12e-14,17;UBERON:0002021,7.39e-10,10;UBERON:0000411,7.39e-10,10;UBERON:0001950,7.39e-10,10;UBERON:0001894,7.18e-08,10;UBERON:0006222,7.18e-08,10;UBERON:0002420,3.09e-07,8;UBERON:0007245,3.09e-07,8;UBERON:0010009,3.09e-07,8;UBERON:0010011,3.09e-07,8;UBERON:0000454,3.09e-07,8;UBERON:0003076,3.31e-07,12;UBERON:0003057,3.31e-07,12 | |||
|phase1_expression=5.76535849577258,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0,0,0,0,0.262261207256992,0,0,0,0.473193248037357,0.822686601634433,0.84877930359606,3.82694805679814,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,1.30815093828268,3.29529274101708,5.05517737593137,2.09979632438044,2.87505128729943,0.503347818173209,0.725362142011344,0.336093799142464,0,0,0,9.71119012126069,15.340738398889,12.0427966666174,0,0,0,0,0.7104801149461,1.19840044207362,6.91592949578798,1.76272340924412,3.64516033495565,3.15487442027073,23.9946826899195,26.283356373242,4.16468717330844,4.02550978276593,7.35375029288017,2.20231761998777,10.9811110753261,8.1411462625809,12.924856197559,18.2975287204819,11.4600941522487,7.2587579740359,14.6318278608237,13.2934475565825,19.1508580557884,17.0846016958924,13.6071595452469,0,0.226714680320357,0,0,0,0,0,0,1.26399978118577,0,0,0,2.81686839553361,0,0,0,0,0,0,0.45673551887624,0.258937883647172,1.03909497345377,2.77576522825817,2.13125834818499,1.84492397804847,3.61734337326294,3.76283862834255,0.502666365318702,0,0.144599356919912,0,0,0,0,0,6.14839673724249,7.54008144528438,0,0,0,0,18.1246673679835,42.5475560621323,21.7382029155255,28.3333641913411,21.9915293304084,23.6878370797899,26.2830846169767,0.916554274652847,0,0.252722758433675,0.210441855886474,4.81445638962004,4.13823787980251,3.06105620669094,3.31550599238573,4.62648194229029,3.33095672740609,3.93547243150861,2.32833033665114,2.37124792226126,2.08016688184601,0.703804496655795,0.657587197282725,1.39023624612799,0.696504333044333,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,27.7582732104648,20.8896363129947,0,0.264450566663544,0.639864751605702,1.85789337488351,1.03093969057675,0.403367049246685,0,1.33157938278791,0.474529061544512,1.4822905925161,0.251335208800269,1.39269530428806,0.779856348476481,0,0.648414149624083,0.199141273254367,1.51734320762465,1.82797620175566,1.1270773567308,0.814605311381257,0.581857461502877,0.911765658574141,0.0632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.947457058852424,0.488894929326078,0.339490171550376,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,8.83028244932856,11.9555920324047,0,0,1.57754109708128,2.73307121007647,2.36965737506079,0.238968797952552,0.668396022247182,0.566153061577665,1.61924280669958,1.75353514746787,2.37172666767914,16.708708453934,0.141940085208269,0.534196811001766,0.162886959353576,0.329940245945071,0,1.45668381692989,2.41858845571801,0.565815239267694,0.590603785761546,0.614870295887855,1.55056975900933,1.45413491791002,0.712994756769443,0.316036757935816,0,0,8.85142974959849,7.74262704334634,7.76152102696527,8.78781843629528,8.51233121482913,4.63758925765383,7.24015690649332,14.6143175575008,0,0,0,0,0,0,0,0,0.582961673259701,9.82754100655701,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0.414599921413271,0,1.26534397432454,0.813277868507395,0.648032044930808,0,0.87345025498471,1.07891477107857,0.991841468704031,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0.117357238645754,0,0,0.483168241652012,0.288030006257865,0,0,0.308132871494482,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.386379188064381,0,0,0,0,35.0146142422581,33.1434170285167,32.0821487526062,22.3409137046794,21.2375581128899,19.6402413321322,24.300810008345,19.8141329418657,20.8445508132734,19.1571315348173,3.1136204275253,4.38927360741134,2.90247129782028,0.972426868273176,2.51535795153579,2.20612210140017,2.889207461421,2.67845574410562,4.49286893428541,2.77966932940177,4.81610669791456,3.01802146217722,2.62196220915671,2.43295579138503,1.95280594449085,1.42888107384922,1.85414921511769,1.73618298417335,3.70877310722976,4.85756436443511,2.40008476669791,3.19456451086807,2.38436189947321,1.74415699958794,2.1645157495526,2.45382362885862,1.82927972872773,3.41990624869196,2.8518863907631,2.24456908663095,2.37270036248348,2.56111654176465,2.04615521584845,2.32405261778949,2.3148793317737,4.24677982494508,2.57324769289949,2.57845264857958,0.765153328275374,2.42650561031467,0.463735671240843 | |||
|short_description=p3@Zcchc18 | |||
}} |
Latest revision as of 15:03, 1 October 2015
Short description: | p3@Zcchc18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Zcchc18_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000033804_5end |
EntrezGene: | Zcchc18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.19e-15 | 23 |
neuroblast (sensu Vertebrata) | 5.19e-15 | 23 |
ectodermal cell | 2.69e-14 | 44 |
neurectodermal cell | 2.69e-14 | 44 |
neural cell | 6.23e-14 | 43 |
neuron | 8.01e-14 | 33 |
neuronal stem cell | 8.01e-14 | 33 |
neuroblast | 8.01e-14 | 33 |
electrically signaling cell | 8.01e-14 | 33 |
electrically responsive cell | 5.19e-10 | 39 |
electrically active cell | 5.19e-10 | 39 |