FFCP PHASE1:Mm9::chr11:79967605..79967639,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:79967605..79967639,+
|short_description=p1@Adap2
|description=CAGE_peak_1_at_Adap2_5end
|association_with_transcript=0bp_to_ENSMUST00000021050,ENSMUST0000...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=216991 | |EntrezGene=216991 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2720 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R2V5,E9QAL8,Q3V340 | |UniProt=Q8R2V5,E9QAL8,Q3V340 | ||
|association_with_transcript=0bp_to_ENSMUST00000021050,ENSMUST00000134118,ENSMUST00000164168_5end | |||
|cluster_id=chr11:79967605..79967639,+ | |||
|description=CAGE_peak_1_at_Adap2_5end | |||
|id=chr11:79967605..79967639,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!1.04e-09!85;UBERON:0002365!3.96e-09!25;UBERON:0002330!3.96e-09!25;UBERON:0002107!7.19e-09!22;UBERON:0007499!7.19e-09!22;UBERON:0006925!7.19e-09!22;UBERON:0009497!7.19e-09!22;UBERON:0000015!7.19e-09!22;UBERON:0002423!7.19e-09!22;UBERON:0006235!7.19e-09!22;UBERON:0008835!7.19e-09!22;UBERON:0003894!7.19e-09!22;UBERON:0004161!7.19e-09!22;UBERON:0008836!7.19e-09!22;UBERON:0009854!8.61e-09!23;UBERON:0009856!8.61e-09!23;UBERON:0004119!3.05e-08!130;UBERON:0000925!3.05e-08!130;UBERON:0006595!3.05e-08!130;UBERON:0000062!5.04e-08!269;UBERON:0007023!5.10e-08!51;UBERON:0005172!8.36e-08!49;UBERON:0005173!8.36e-08!49;UBERON:0002417!8.36e-08!49;UBERON:0000916!8.36e-08!49;UBERON:0001007!9.03e-08!128;UBERON:0001555!9.03e-08!128;UBERON:0007026!9.03e-08!128;UBERON:0004921!1.07e-07!126;UBERON:0004185!1.07e-07!126;UBERON:0000468!1.87e-07!333;UBERON:0009569!2.96e-07!66;UBERON:0005409!3.00e-07!59;UBERON:0002100!9.19e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.11e-10,79;UBERON:0002365,3.54e-09,25;UBERON:0002330,3.54e-09,25;UBERON:0002107,6.45e-09,22;UBERON:0007499,6.45e-09,22;UBERON:0006925,6.45e-09,22;UBERON:0009497,6.45e-09,22;UBERON:0000015,6.45e-09,22;UBERON:0002423,6.45e-09,22;UBERON:0006235,6.45e-09,22;UBERON:0008835,6.45e-09,22;UBERON:0003894,6.45e-09,22;UBERON:0004161,6.45e-09,22;UBERON:0008836,6.45e-09,22;UBERON:0009854,7.73e-09,23;UBERON:0009856,7.73e-09,23;UBERON:0007023,4.63e-08,51;UBERON:0005172,9.13e-08,49;UBERON:0005173,9.13e-08,49;UBERON:0002417,9.13e-08,49;UBERON:0000916,9.13e-08,49;UBERON:0002100,1.32e-07,90;UBERON:0009569,2.57e-07,66 | |||
|phase1_expression=1.12104192973356,35.5954915792148,33.6699437148257,104.04768868955,136.744534275353,2.01455126294268,1.40167584357315,0,0,0,0,0,0,0.0874204024189974,14.3237197580735,6.47920855647443,10.4934281719222,3.78554598429885,5.89592064504677,6.36584477697045,12.9265801029626,0,0,5.43974237497583,4.5881856213434,16.0784949952206,15.5074318617267,8.61884930743556,12.5415456841207,21.4225610295941,4.8780712344167,0,0,0,1.1554064790051,0.831173226792462,2.04169356262369,0,0.7813353445238,0.523523743973798,0,1.36609096991689,0.485510353031154,0,0.101376931219515,0,1.56478268869608,0,0.219686182734472,0.388859798148567,0.419959264876088,0,0,0,0,4.88792928468299,20.057340795713,9.7977697532714,1.21389876515759,1.5869729378161,3.1691570175309,0,0.889294796111139,63.4429300683386,79.109309005358,62.5222501152568,31.4580116044325,22.6688800139717,1.76272340924412,2.29510095163874,1.68259969081106,5.14171771926846,4.63823935998388,2.08234358665422,2.20444583341944,2.75765635983006,3.30347642998166,6.38436690425939,4.91540906419979,2.50583946687368,1.64677758484337,2.6045668527838,6.14202597803038,3.93933827022176,3.20876320331301,4.41942878210502,4.55589378557129,2.23679334990361,0.530083353332288,0.377857800533928,8.69593466105033,68.8339101585109,20.3991400112325,46.9541776724901,64.3278653273192,50.6270382419989,17.9768857768642,0,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,32.8849573590893,26.9295398993059,15.7348667408714,2.60227990149204,4.56698217468212,2.99800146432876,3.76806601381556,7.2904998424137,10.053327306374,35.3488803860155,6.65157041831594,12.3845477272982,4.69123864847487,9.71702681225732,6.30337829075789,5.59175283654366,5.27005434620785,6.0739544975902,30.3993895698224,0.599075622529601,0,0.127070227073065,4.94309110035915,7.32000964509802,3.01570445070875,7.99591872884472,11.2514801225345,7.48036960414416,10.8701646255398,4.17541391786297,11.6942552373487,2.52722758433675,14.9413717679397,1.17108398666433,0.919608417733892,1.0803727788321,2.26057226753573,3.06164246180975,1.2811372028485,2.06143794031403,4.39795730256327,0.646703978798527,0.945530400839096,1.05570674498369,1.7535658594206,1.66828349535359,4.87553033131033,3.90986059175093,1.19420560091096,0,0.772043721344145,0.284163499395593,0.414251545071004,0.234526059981096,1.08037236876609,0.946978942340841,1.37734962223183,1.23413690309903,2.32533944750408,2.14618721119695,7.58974725386602,3.94943639792353,7.05920095540109,20.4293400055556,18.1287984407412,17.344459107993,28.1833479396781,6.72927835405207,3.08713837137853,59.1449621540998,32.2629691329524,0.213288250535234,0.464473343720877,2.31961430379768,5.04208811558356,5.55945109612176,5.1360919050391,25.6245693234036,12.1877226495768,8.54539709920916,13.5290400987983,12.8676297498619,26.0657628509724,22.0460810872188,31.2651799009356,0.569003702859245,1.37098215131675,3.38123207019241,1.4255592949172,2.52138233317913,4.55882829287071,8.78987866027176,30.8505209277369,31.2427468404336,48.0014967655804,51.5827571131639,2.66952169145751,3.53806191203765,5.62155280962134,8.52012509831712,8.92355491083942,10.1850340712568,16.1109836972454,16.5377931310536,19.2192989231657,35.9420516318386,37.2140947668503,44.6213872553822,37.3816739361725,40.3644180424302,59.3405531276942,20.6923572986597,0.568474235311454,1.14075483509418,1.18821560042632,1.87752198630802,6.365237782789,11.6641384034147,22.4403695036469,10.5615546551148,10.1873757238436,13.3942005672289,30.4785765371273,14.6782234586011,33.1246344151661,69.3639906120652,73.9711729993445,7.86822836830458,6.62248191131358,7.06422595946285,6.91548950893999,0,12.876017287423,0,0,0.215423397732799,0,0.222798674082394,0.566153061577665,0.809621403349789,0.292255857911312,0,6.10510501201433,8.51640511249612,2.67098405500883,3.58351310577867,16.6619824202261,37.1686387351896,1.21390318077491,3.02323556964751,8.29862350925952,8.85905678642318,12.604841065701,21.4495483329624,17.8131527443978,11.7644134866958,13.5895805912401,16.8669773719998,40.2228618667929,7.14923172082955,1.44048875225048,2.58717367565509,3.00071849044229,2.48276327099183,2.14042581122485,2.46823530903181,3.95804433848979,9.38686832254841,15.2519091021951,3.08739757276947,8.90385765883992,9.68786560175433,3.49814964583304,2.02932984805332,2.46211349617592,25.0673519501672,7.41701208042039,17.7705716029767,4.12773735926445,5.00025223898222,7.34636982318295,10.2520670790769,13.4979122191848,0,0,0.138199973804424,8.59203556213602,0.474503990371703,4.26970880966382,2.26811215725783,1.88179466413022,5.24070152990826,5.93403124093211,12.4806718145257,9.94672579539312,12.3134224627203,8.69875038321696,1.69107881605257,0.897099276263873,0.66183396182839,1.94451188344048,1.16243841129958,1.520605129417,3.40335992072686,2.3436789271911,2.41176492179135,3.38217769156408,2.30424005006292,4.4241556887945,1.82452693761148,1.54066435747241,1.68897069871134,2.32734704367726,2.78153896693771,5.04820887983869,3.83992770653901,2.52416124870369,2.209997392995,3.12561173924206,4.77543615624787,3.84847366561318,5.2594605981706,4.76133805591944,2.88581739386284,2.78112955489375,2.18250001273302,7.92077335531981,11.0732660516197,11.3554007045704,7.28852488868824,4.51414893631827,10.1655331671072,6.44455331110048,4.01026859407578,7.04598047609119,2.74033007908257,4.5323633843382,8.10027000278167,2.2516060161211,3.17199686288943,4.65984280576638,0.62272408550506,1.19707462020309,1.19513524027894,3.8897074730927,3.98265008993166,3.30918315210025,5.11167473943715,5.15087643097235,4.49286893428541,3.79045817645696,5.57654459758527,4.71565853465191,3.46473577638565,3.64943368707755,4.53740204749345,6.19181798667996,4.63537303779422,5.78727661391115,5.76920261124629,5.5935589651071,1.37147700954166,5.50174999093946,3.57654284920981,3.92435324907287,4.51725025993587,4.56918882615053,4.024415403201,4.47218509444333,4.07412341537585,4.48913817326191,5.69448086996036,4.62971067165148,4.91077251803627,4.02835787083512,7.13754460630223,3.74715866906919,4.91256377735358,10.5286816483666,17.0246615541271,4.85301122062934,7.65163857547391 | |phase1_expression=1.12104192973356,35.5954915792148,33.6699437148257,104.04768868955,136.744534275353,2.01455126294268,1.40167584357315,0,0,0,0,0,0,0.0874204024189974,14.3237197580735,6.47920855647443,10.4934281719222,3.78554598429885,5.89592064504677,6.36584477697045,12.9265801029626,0,0,5.43974237497583,4.5881856213434,16.0784949952206,15.5074318617267,8.61884930743556,12.5415456841207,21.4225610295941,4.8780712344167,0,0,0,1.1554064790051,0.831173226792462,2.04169356262369,0,0.7813353445238,0.523523743973798,0,1.36609096991689,0.485510353031154,0,0.101376931219515,0,1.56478268869608,0,0.219686182734472,0.388859798148567,0.419959264876088,0,0,0,0,4.88792928468299,20.057340795713,9.7977697532714,1.21389876515759,1.5869729378161,3.1691570175309,0,0.889294796111139,63.4429300683386,79.109309005358,62.5222501152568,31.4580116044325,22.6688800139717,1.76272340924412,2.29510095163874,1.68259969081106,5.14171771926846,4.63823935998388,2.08234358665422,2.20444583341944,2.75765635983006,3.30347642998166,6.38436690425939,4.91540906419979,2.50583946687368,1.64677758484337,2.6045668527838,6.14202597803038,3.93933827022176,3.20876320331301,4.41942878210502,4.55589378557129,2.23679334990361,0.530083353332288,0.377857800533928,8.69593466105033,68.8339101585109,20.3991400112325,46.9541776724901,64.3278653273192,50.6270382419989,17.9768857768642,0,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,32.8849573590893,26.9295398993059,15.7348667408714,2.60227990149204,4.56698217468212,2.99800146432876,3.76806601381556,7.2904998424137,10.053327306374,35.3488803860155,6.65157041831594,12.3845477272982,4.69123864847487,9.71702681225732,6.30337829075789,5.59175283654366,5.27005434620785,6.0739544975902,30.3993895698224,0.599075622529601,0,0.127070227073065,4.94309110035915,7.32000964509802,3.01570445070875,7.99591872884472,11.2514801225345,7.48036960414416,10.8701646255398,4.17541391786297,11.6942552373487,2.52722758433675,14.9413717679397,1.17108398666433,0.919608417733892,1.0803727788321,2.26057226753573,3.06164246180975,1.2811372028485,2.06143794031403,4.39795730256327,0.646703978798527,0.945530400839096,1.05570674498369,1.7535658594206,1.66828349535359,4.87553033131033,3.90986059175093,1.19420560091096,0,0.772043721344145,0.284163499395593,0.414251545071004,0.234526059981096,1.08037236876609,0.946978942340841,1.37734962223183,1.23413690309903,2.32533944750408,2.14618721119695,7.58974725386602,3.94943639792353,7.05920095540109,20.4293400055556,18.1287984407412,17.344459107993,28.1833479396781,6.72927835405207,3.08713837137853,59.1449621540998,32.2629691329524,0.213288250535234,0.464473343720877,2.31961430379768,5.04208811558356,5.55945109612176,5.1360919050391,25.6245693234036,12.1877226495768,8.54539709920916,13.5290400987983,12.8676297498619,26.0657628509724,22.0460810872188,31.2651799009356,0.569003702859245,1.37098215131675,3.38123207019241,1.4255592949172,2.52138233317913,4.55882829287071,8.78987866027176,30.8505209277369,31.2427468404336,48.0014967655804,51.5827571131639,2.66952169145751,3.53806191203765,5.62155280962134,8.52012509831712,8.92355491083942,10.1850340712568,16.1109836972454,16.5377931310536,19.2192989231657,35.9420516318386,37.2140947668503,44.6213872553822,37.3816739361725,40.3644180424302,59.3405531276942,20.6923572986597,0.568474235311454,1.14075483509418,1.18821560042632,1.87752198630802,6.365237782789,11.6641384034147,22.4403695036469,10.5615546551148,10.1873757238436,13.3942005672289,30.4785765371273,14.6782234586011,33.1246344151661,69.3639906120652,73.9711729993445,7.86822836830458,6.62248191131358,7.06422595946285,6.91548950893999,0,12.876017287423,0,0,0.215423397732799,0,0.222798674082394,0.566153061577665,0.809621403349789,0.292255857911312,0,6.10510501201433,8.51640511249612,2.67098405500883,3.58351310577867,16.6619824202261,37.1686387351896,1.21390318077491,3.02323556964751,8.29862350925952,8.85905678642318,12.604841065701,21.4495483329624,17.8131527443978,11.7644134866958,13.5895805912401,16.8669773719998,40.2228618667929,7.14923172082955,1.44048875225048,2.58717367565509,3.00071849044229,2.48276327099183,2.14042581122485,2.46823530903181,3.95804433848979,9.38686832254841,15.2519091021951,3.08739757276947,8.90385765883992,9.68786560175433,3.49814964583304,2.02932984805332,2.46211349617592,25.0673519501672,7.41701208042039,17.7705716029767,4.12773735926445,5.00025223898222,7.34636982318295,10.2520670790769,13.4979122191848,0,0,0.138199973804424,8.59203556213602,0.474503990371703,4.26970880966382,2.26811215725783,1.88179466413022,5.24070152990826,5.93403124093211,12.4806718145257,9.94672579539312,12.3134224627203,8.69875038321696,1.69107881605257,0.897099276263873,0.66183396182839,1.94451188344048,1.16243841129958,1.520605129417,3.40335992072686,2.3436789271911,2.41176492179135,3.38217769156408,2.30424005006292,4.4241556887945,1.82452693761148,1.54066435747241,1.68897069871134,2.32734704367726,2.78153896693771,5.04820887983869,3.83992770653901,2.52416124870369,2.209997392995,3.12561173924206,4.77543615624787,3.84847366561318,5.2594605981706,4.76133805591944,2.88581739386284,2.78112955489375,2.18250001273302,7.92077335531981,11.0732660516197,11.3554007045704,7.28852488868824,4.51414893631827,10.1655331671072,6.44455331110048,4.01026859407578,7.04598047609119,2.74033007908257,4.5323633843382,8.10027000278167,2.2516060161211,3.17199686288943,4.65984280576638,0.62272408550506,1.19707462020309,1.19513524027894,3.8897074730927,3.98265008993166,3.30918315210025,5.11167473943715,5.15087643097235,4.49286893428541,3.79045817645696,5.57654459758527,4.71565853465191,3.46473577638565,3.64943368707755,4.53740204749345,6.19181798667996,4.63537303779422,5.78727661391115,5.76920261124629,5.5935589651071,1.37147700954166,5.50174999093946,3.57654284920981,3.92435324907287,4.51725025993587,4.56918882615053,4.024415403201,4.47218509444333,4.07412341537585,4.48913817326191,5.69448086996036,4.62971067165148,4.91077251803627,4.02835787083512,7.13754460630223,3.74715866906919,4.91256377735358,10.5286816483666,17.0246615541271,4.85301122062934,7.65163857547391 | ||
|short_description=p1@Adap2 | |||
}} | }} |
Latest revision as of 19:08, 25 September 2015
Short description: | p1@Adap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Adap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2720 |
Association with transcript: | 0bp_to_ENSMUST00000021050, ENSMUST00000134118, ENSMUST00000164168_5end |
EntrezGene: | Adap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 5.11e-10 | 79 |
exocrine gland | 3.54e-09 | 25 |
exocrine system | 3.54e-09 | 25 |
liver | 6.45e-09 | 22 |
epithelial sac | 6.45e-09 | 22 |
digestive gland | 6.45e-09 | 22 |
epithelium of foregut-midgut junction | 6.45e-09 | 22 |
anatomical boundary | 6.45e-09 | 22 |
hepatobiliary system | 6.45e-09 | 22 |
foregut-midgut junction | 6.45e-09 | 22 |
hepatic diverticulum | 6.45e-09 | 22 |
liver primordium | 6.45e-09 | 22 |
septum transversum | 6.45e-09 | 22 |
liver bud | 6.45e-09 | 22 |
digestive tract diverticulum | 7.73e-09 | 23 |
sac | 7.73e-09 | 23 |
adult organism | 4.63e-08 | 51 |
abdomen element | 9.13e-08 | 49 |
abdominal segment element | 9.13e-08 | 49 |
abdominal segment of trunk | 9.13e-08 | 49 |
abdomen | 9.13e-08 | 49 |
trunk | 1.32e-07 | 90 |
subdivision of trunk | 2.57e-07 | 66 |