FFCP PHASE1:Mm9::chr12:28025049..28025062,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:28025049..28025062,-
|short_description=p@chr12:28025049..28025062,-
|description=CAGE_peak_at_chr12:28025049..28025062,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2776 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:28025049..28025062,- | |||
|description=CAGE_peak_at_chr12:28025049..28025062,- | |||
|id=chr12:28025049..28025062,- | |||
|ontology_enrichment_celltype=CL:0000540!1.91e-12!33;CL:0000047!1.91e-12!33;CL:0000031!1.91e-12!33;CL:0000404!1.91e-12!33;CL:0000221!3.84e-11!44;CL:0000133!3.84e-11!44;CL:0002319!5.66e-11!43;CL:0000117!6.11e-10!23;CL:0000337!6.11e-10!23;CL:0000393!4.82e-09!39;CL:0000211!4.82e-09!39;CL:0000055!5.69e-08!50;CL:0002609!3.94e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.16e-18,23;CL:0000337,2.16e-18,23;CL:0002609,9.12e-18,6;CL:0000540,7.78e-14,33;CL:0000047,7.78e-14,33;CL:0000031,7.78e-14,33;CL:0000404,7.78e-14,33;CL:0002319,1.96e-11,43;CL:0000393,3.16e-11,39;CL:0000211,3.16e-11,39;CL:0000221,4.25e-11,44;CL:0000133,4.25e-11,44;CL:0002608,9.06e-10,3;CL:0002613,6.85e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.31e-10!71;UBERON:0003075!1.31e-10!71;UBERON:0007284!1.31e-10!71;UBERON:0000073!3.45e-10!75;UBERON:0001016!3.45e-10!75;UBERON:0004121!4.80e-10!102;UBERON:0000924!4.80e-10!102;UBERON:0006601!4.80e-10!102;UBERON:0001017!6.97e-10!73;UBERON:0005743!6.97e-10!73;UBERON:0003056!2.81e-09!49;UBERON:0000033!1.68e-07!63;UBERON:0001049!2.53e-07!52;UBERON:0005068!2.53e-07!52;UBERON:0006241!2.53e-07!52;UBERON:0007135!2.53e-07!52;UBERON:0003080!5.28e-07!40;UBERON:0002020!5.50e-07!34;UBERON:0002780!7.83e-07!39;UBERON:0001890!7.83e-07!39;UBERON:0006240!7.83e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,4.72e-15,39;UBERON:0001890,4.72e-15,39;UBERON:0006240,4.72e-15,39;UBERON:0003056,1.36e-14,49;UBERON:0003080,1.39e-14,40;UBERON:0002346,2.11e-14,64;UBERON:0003075,2.11e-14,64;UBERON:0007284,2.11e-14,64;UBERON:0003528,6.99e-14,29;UBERON:0002791,6.99e-14,29;UBERON:0001893,6.99e-14,29;UBERON:0002616,7.00e-14,46;UBERON:0000955,1.67e-13,47;UBERON:0006238,1.67e-13,47;UBERON:0001049,2.20e-13,52;UBERON:0005068,2.20e-13,52;UBERON:0006241,2.20e-13,52;UBERON:0007135,2.20e-13,52;UBERON:0002020,2.91e-13,34;UBERON:0000073,9.75e-13,54;UBERON:0001017,3.51e-12,73;UBERON:0010371,4.80e-12,73;UBERON:0001016,9.91e-12,75;UBERON:0004121,1.95e-10,95;UBERON:0000924,1.95e-10,95;UBERON:0006601,1.95e-10,95;UBERON:0000369,3.88e-09,5;UBERON:0002435,3.88e-09,5;UBERON:0000204,3.88e-09,5;UBERON:0010082,3.88e-09,5;UBERON:0010314,1.35e-08,92;UBERON:0002420,2.00e-08,8;UBERON:0007245,2.00e-08,8;UBERON:0010009,2.00e-08,8;UBERON:0010011,2.00e-08,8;UBERON:0000454,2.00e-08,8;UBERON:0000956,1.33e-07,21;UBERON:0001869,1.33e-07,21;UBERON:0000203,1.33e-07,21;UBERON:0001954,5.73e-07,7;UBERON:0003022,5.73e-07,7;UBERON:0002421,5.73e-07,7;UBERON:0000349,5.73e-07,7;UBERON:0002600,5.73e-07,7 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,2.22548106945558,0.528990979272033,8.87363964908651,0,0,0,0,0.7104801149461,0,0,3.62913643079672,10.2604513132085,6.09942387919008,0.856952953211411,0,3.42974237801871,38.0506519942398,17.4651569455904,0,0.127687338085188,0,3.29715719325485,17.7486028588675,1.04182674111352,0,1.68828783009504,0,0.589257170947335,0.427115042397309,1.3047961207771,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0.693941307064543,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0,2.89005009859588,0,0,0,0.162241263067758,0.101839363850316,0,0,0,1.95180664444056,0.689706313300419,0.900310649026746,1.65775299619287,0.408218994907967,0.512454881139399,0.0937017245597288,0,0.862271971731369,0.756424320671277,0.879755620819744,0.657587197282725,1.94633074457919,0,0.205782136407943,1.59227413454795,0,0,0,0,0.938104239924385,0.540186184383045,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0.134206418760372,0.420579897128254,2.46971069710283,0,0,2.13288250535234,1.16118335930219,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0.189667900953082,1.37098215131675,0,1.83286195060783,0.581857461502877,0.210407459670956,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.678980343100753,0.234690248288502,0,0,0,0.315270288212382,0.221464689648775,0,0.491589944147214,0,0,0,0,0,0,0,0.117211686592203,0,0,0.631016438832513,1.17131623288992,0.430846795465598,0.238968797952552,0,0,0.809621403349789,0.876767573733936,0.395287777946524,0,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,2.70091641046965,1.94038025674132,1.92903331528433,0,0.891844088010353,0.493647061806363,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.216010681643603,1.04544148007234,0.218362563746178,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.515559547031063,0,0,0,0.45032120322422,0,0,4.25528125095124,0.399024873401031,0.682934423016537,0.486213434136588,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0,0.468207537349412,0.448176066834085,0.17230640686684,0,0.695305955669133,0.38581844092741,0,0.147198920134397,1.37147700954166,1.24233064311536,0.715308569841963,0,0.658765662907314,1.01537529470012,0.365855945745545,0,0.271608227691724,0.561142271657738,0.474540072496697,0.0985044823755635,0,0.464810523557898,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,2.22548106945558,0.528990979272033,8.87363964908651,0,0,0,0,0.7104801149461,0,0,3.62913643079672,10.2604513132085,6.09942387919008,0.856952953211411,0,3.42974237801871,38.0506519942398,17.4651569455904,0,0.127687338085188,0,3.29715719325485,17.7486028588675,1.04182674111352,0,1.68828783009504,0,0.589257170947335,0.427115042397309,1.3047961207771,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0.693941307064543,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0,2.89005009859588,0,0,0,0.162241263067758,0.101839363850316,0,0,0,1.95180664444056,0.689706313300419,0.900310649026746,1.65775299619287,0.408218994907967,0.512454881139399,0.0937017245597288,0,0.862271971731369,0.756424320671277,0.879755620819744,0.657587197282725,1.94633074457919,0,0.205782136407943,1.59227413454795,0,0,0,0,0.938104239924385,0.540186184383045,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0.134206418760372,0.420579897128254,2.46971069710283,0,0,2.13288250535234,1.16118335930219,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0.189667900953082,1.37098215131675,0,1.83286195060783,0.581857461502877,0.210407459670956,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.678980343100753,0.234690248288502,0,0,0,0.315270288212382,0.221464689648775,0,0.491589944147214,0,0,0,0,0,0,0,0.117211686592203,0,0,0.631016438832513,1.17131623288992,0.430846795465598,0.238968797952552,0,0,0.809621403349789,0.876767573733936,0.395287777946524,0,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,2.70091641046965,1.94038025674132,1.92903331528433,0,0.891844088010353,0.493647061806363,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.216010681643603,1.04544148007234,0.218362563746178,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.515559547031063,0,0,0,0.45032120322422,0,0,4.25528125095124,0.399024873401031,0.682934423016537,0.486213434136588,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0,0.468207537349412,0.448176066834085,0.17230640686684,0,0.695305955669133,0.38581844092741,0,0.147198920134397,1.37147700954166,1.24233064311536,0.715308569841963,0,0.658765662907314,1.01537529470012,0.365855945745545,0,0.271608227691724,0.561142271657738,0.474540072496697,0.0985044823755635,0,0.464810523557898,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr12:28025049..28025062,- | |||
}} | }} |
Latest revision as of 22:52, 4 August 2015
Short description: | p@chr12:28025049..28025062, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:28025049..28025062, - |
Coexpression cluster: | MCL_coexpression_mm9:2776 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.16e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.16e-18 | 23 |
neuron of cerebral cortex | 9.12e-18 | 6 |
neuron | 7.78e-14 | 33 |
neuronal stem cell | 7.78e-14 | 33 |
neuroblast | 7.78e-14 | 33 |
electrically signaling cell | 7.78e-14 | 33 |
neural cell | 1.96e-11 | 43 |
electrically responsive cell | 3.16e-11 | 39 |
electrically active cell | 3.16e-11 | 39 |
ectodermal cell | 4.25e-11 | 44 |
neurectodermal cell | 4.25e-11 | 44 |
hippocampal neuron | 9.06e-10 | 3 |
striatum neuron | 6.85e-09 | 3 |