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FFCP PHASE1:Mm9::chr12:72149359..72149406,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:72149359..72149406,+
|DHSsupport=NA
|short_description=p4@Arid4a
|DPIdataset=NA
|description=CAGE_peak_4_at_Arid4a_5end
|association_with_transcript=9bp_to_uc007nuf.1_5end
|EntrezGene=238247
|EntrezGene=238247
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=9bp_to_uc007nuf.1_5end
|cluster_id=chr12:72149359..72149406,+
|description=CAGE_peak_4_at_Arid4a_5end
|id=chr12:72149359..72149406,+
|ontology_enrichment_celltype=CL:0000540!1.17e-09!33;CL:0000047!1.17e-09!33;CL:0000031!1.17e-09!33;CL:0000404!1.17e-09!33;CL:0000393!5.50e-09!39;CL:0000211!5.50e-09!39;CL:0000117!1.25e-07!23;CL:0000337!1.25e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000540,2.06e-11,33;CL:0000047,2.06e-11,33;CL:0000031,2.06e-11,33;CL:0000404,2.06e-11,33;CL:0000117,3.95e-10,23;CL:0000337,3.95e-10,23;CL:0000393,1.55e-09,39;CL:0000211,1.55e-09,39;CL:0002319,2.86e-07,43;CL:0002609,3.06e-07,6;CL:0000221,5.72e-07,44;CL:0000133,5.72e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.23e-23!73;UBERON:0005743!7.23e-23!73;UBERON:0000955!1.44e-22!50;UBERON:0006238!1.44e-22!50;UBERON:0002616!6.87e-22!49;UBERON:0000073!1.30e-21!75;UBERON:0001016!1.30e-21!75;UBERON:0002346!3.99e-21!71;UBERON:0003075!3.99e-21!71;UBERON:0007284!3.99e-21!71;UBERON:0001049!6.16e-21!52;UBERON:0005068!6.16e-21!52;UBERON:0006241!6.16e-21!52;UBERON:0007135!6.16e-21!52;UBERON:0000033!2.20e-20!63;UBERON:0003056!7.75e-20!49;UBERON:0003080!8.04e-20!40;UBERON:0002780!3.27e-19!39;UBERON:0001890!3.27e-19!39;UBERON:0006240!3.27e-19!39;UBERON:0004121!7.60e-18!102;UBERON:0000924!7.60e-18!102;UBERON:0006601!7.60e-18!102;UBERON:0002791!3.22e-17!29;UBERON:0003528!3.22e-17!29;UBERON:0001893!3.22e-17!29;UBERON:0002020!4.77e-17!34;UBERON:0000956!8.40e-14!21;UBERON:0001869!8.40e-14!21;UBERON:0000203!8.40e-14!21;UBERON:0007811!2.18e-13!86;UBERON:0000153!1.43e-12!94;UBERON:0002619!2.72e-11!17;UBERON:0000025!4.37e-09!114;UBERON:0002021!2.57e-08!10;UBERON:0000411!2.57e-08!10;UBERON:0001950!2.57e-08!10;UBERON:0004111!1.48e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.96e-32,54;UBERON:0001017,9.80e-32,73;UBERON:0001016,1.95e-30,75;UBERON:0001049,5.92e-30,52;UBERON:0005068,5.92e-30,52;UBERON:0006241,5.92e-30,52;UBERON:0007135,5.92e-30,52;UBERON:0000955,2.22e-29,47;UBERON:0006238,2.22e-29,47;UBERON:0002616,2.93e-28,46;UBERON:0002346,1.23e-26,64;UBERON:0003075,1.23e-26,64;UBERON:0007284,1.23e-26,64;UBERON:0003080,6.47e-26,40;UBERON:0002780,6.72e-25,39;UBERON:0001890,6.72e-25,39;UBERON:0006240,6.72e-25,39;UBERON:0002020,1.64e-23,34;UBERON:0004121,1.67e-23,95;UBERON:0000924,1.67e-23,95;UBERON:0006601,1.67e-23,95;UBERON:0003528,2.71e-23,29;UBERON:0002791,2.71e-23,29;UBERON:0001893,2.71e-23,29;UBERON:0003056,8.34e-23,49;UBERON:0010371,1.57e-21,73;UBERON:0000956,3.75e-20,21;UBERON:0001869,3.75e-20,21;UBERON:0000203,3.75e-20,21;UBERON:0002619,8.45e-16,17;UBERON:0010314,5.70e-15,92;UBERON:0002021,2.00e-13,10;UBERON:0000411,2.00e-13,10;UBERON:0001950,2.00e-13,10;UBERON:0000025,1.23e-11,114;UBERON:0004111,5.94e-10,122
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.42035655785734,0,0,0,0,0.171200729931206,0.611942816932982,0,0,0,0.315462165358238,0.137114433605739,0,2.46625541438102,1.48936426801328,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0,0,0.659058548203415,0.972149495371417,0.979904951377538,0,0,0.725362142011344,0.672187598284928,1.28629718017973,0.85960031981627,0.515672092277442,1.21389876515759,0.528990979272033,0,0,0,0,0.988866362566974,0,0,0,5.91030790158323,4.05017814995072,5.25812403378455,0,0.441737081903227,4.40966877173835,2.20444583341944,3.67687514644008,2.20231761998777,3.83062014255563,4.45458946443106,0.923204014111357,0.914876436024097,2.08365348222704,1.11673199600552,2.8138130501584,4.5839474333043,1.17851434189467,2.70506193518296,2.42319279572891,0,0.151143120213571,1.73918693221007,0,0,0,0,0,0.280888840263504,0.852151612890289,0.519572009205738,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.890652834388949,0.693941307064543,0,0.461230994512117,0.301445281105245,0.352766121407114,0.879666139307728,0,0.433798070759735,0,0,0,0,0,5.27005434620785,6.28340120440365,0.255457055208591,0.239630249011841,0,0,4.19413790333504,6.40500843946077,7.66491547888473,13.5582969749976,9.46147192122223,4.57133698031032,4.05603157669394,0.407357455401265,0.124406970610093,0,1.26265113531884,0.130120442962704,0.229902104433473,0.720248519221397,0.60281927134286,0.612328492361951,1.0249097622788,0.655912071918102,1.55222022443409,0,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0.324275238183423,0.438599962275997,0,0.536825675041487,13.8791366052324,18.0083071663748,0,0.264450566663544,0.426576501070468,0.464473343720877,0.257734922644187,0,0,0.570676878337677,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0.456994050438915,0,0,0,0,0.569128834118316,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0,2.87536413054709,0,1.87222603868736,1.51547326768267,0.538192240565737,0,1.10851914099963,0.568474235311454,0.977789858652155,0.848725428875941,0.469380496577004,0.167506257441816,0,0,1.26108115284953,0.664394068946325,0.637819074629948,0.81931657357869,1.38147985492716,0.723245292907558,0,0.54390568381871,0.491764273019036,0.275936746304732,5.29816946959713,2.10981035865966,0,0.757412781613119,0.94652465824877,0.390438744296638,1.50796378412959,2.15071918157297,1.78238939265915,1.13230612315533,2.42886421004937,0.876767573733936,1.18586333383957,5.46246237917072,0.567760340833074,0,0,0.164970122972535,0,0.971122544619926,0,0.565815239267694,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,2.06271086496374,5.10659408630682,0.36012218806262,0,0.857348140126369,2.12808280370728,2.67553226403106,1.81003922662333,0.913394847343798,0,0,0.220528398054962,0.49465875882444,0,0.120625849856312,0,0,0.291480836629851,2.96680483216816,0.512612642393558,0.206386867963223,0,0.188368457004691,0.136694227721025,0.228778173206523,0.509935289981566,0.839708713941948,0.690999869022119,0,0.632671987162271,0.406638934253697,0.648032044930808,0,0.655087691238533,0,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.352071715937262,0.39061315453185,0,0.241584120826006,0.576060012515731,0.948033361884535,0,0.102710957164827,0,0.179026695667481,0,0.240390899039938,0.886137163047463,0.403865799792591,0.457240839929999,0.705783295957884,0.487289403698762,0.481059208201647,1.28564592399726,0.453460767230423,0,0,0,0.386379188064381,0,0,0,0,17.5073071211291,11.0478056761722,19.4784474569395,14.7793736815571,10.2762377965596,6.7985450765073,6.75022500231806,7.65546045481175,9.9691329976525,10.8729665467882,0,0.399024873401031,1.19513524027894,1.45864030240976,0.628839487883947,0.919217542250071,0.666740183404846,0,0.962757628775446,2.02157769411038,1.2673964994512,1.88626341386076,1.591905626988,1.85672941974121,1.7230640686684,0.476293691283074,1.73826488917283,1.35036454324594,1.23625770240992,1.32479028120958,0.685738504770831,1.06485483695602,0.715308569841963,1.45346416632329,1.69396884747595,1.52306294205018,0.914639864363863,2.36762740294059,0.814824683075171,0.561142271657738,0.830445126869219,0.788035859004508,0.818462086339379,0.929621047115796,0.385813221962283,1.24905288968973,0.467863216890817,1.07435527024149,0.57386499620653,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.42035655785734,0,0,0,0,0.171200729931206,0.611942816932982,0,0,0,0.315462165358238,0.137114433605739,0,2.46625541438102,1.48936426801328,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0,0,0.659058548203415,0.972149495371417,0.979904951377538,0,0,0.725362142011344,0.672187598284928,1.28629718017973,0.85960031981627,0.515672092277442,1.21389876515759,0.528990979272033,0,0,0,0,0.988866362566974,0,0,0,5.91030790158323,4.05017814995072,5.25812403378455,0,0.441737081903227,4.40966877173835,2.20444583341944,3.67687514644008,2.20231761998777,3.83062014255563,4.45458946443106,0.923204014111357,0.914876436024097,2.08365348222704,1.11673199600552,2.8138130501584,4.5839474333043,1.17851434189467,2.70506193518296,2.42319279572891,0,0.151143120213571,1.73918693221007,0,0,0,0,0,0.280888840263504,0.852151612890289,0.519572009205738,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.890652834388949,0.693941307064543,0,0.461230994512117,0.301445281105245,0.352766121407114,0.879666139307728,0,0.433798070759735,0,0,0,0,0,5.27005434620785,6.28340120440365,0.255457055208591,0.239630249011841,0,0,4.19413790333504,6.40500843946077,7.66491547888473,13.5582969749976,9.46147192122223,4.57133698031032,4.05603157669394,0.407357455401265,0.124406970610093,0,1.26265113531884,0.130120442962704,0.229902104433473,0.720248519221397,0.60281927134286,0.612328492361951,1.0249097622788,0.655912071918102,1.55222022443409,0,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0.324275238183423,0.438599962275997,0,0.536825675041487,13.8791366052324,18.0083071663748,0,0.264450566663544,0.426576501070468,0.464473343720877,0.257734922644187,0,0,0.570676878337677,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0.456994050438915,0,0,0,0,0.569128834118316,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0,2.87536413054709,0,1.87222603868736,1.51547326768267,0.538192240565737,0,1.10851914099963,0.568474235311454,0.977789858652155,0.848725428875941,0.469380496577004,0.167506257441816,0,0,1.26108115284953,0.664394068946325,0.637819074629948,0.81931657357869,1.38147985492716,0.723245292907558,0,0.54390568381871,0.491764273019036,0.275936746304732,5.29816946959713,2.10981035865966,0,0.757412781613119,0.94652465824877,0.390438744296638,1.50796378412959,2.15071918157297,1.78238939265915,1.13230612315533,2.42886421004937,0.876767573733936,1.18586333383957,5.46246237917072,0.567760340833074,0,0,0.164970122972535,0,0.971122544619926,0,0.565815239267694,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,2.06271086496374,5.10659408630682,0.36012218806262,0,0.857348140126369,2.12808280370728,2.67553226403106,1.81003922662333,0.913394847343798,0,0,0.220528398054962,0.49465875882444,0,0.120625849856312,0,0,0.291480836629851,2.96680483216816,0.512612642393558,0.206386867963223,0,0.188368457004691,0.136694227721025,0.228778173206523,0.509935289981566,0.839708713941948,0.690999869022119,0,0.632671987162271,0.406638934253697,0.648032044930808,0,0.655087691238533,0,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.352071715937262,0.39061315453185,0,0.241584120826006,0.576060012515731,0.948033361884535,0,0.102710957164827,0,0.179026695667481,0,0.240390899039938,0.886137163047463,0.403865799792591,0.457240839929999,0.705783295957884,0.487289403698762,0.481059208201647,1.28564592399726,0.453460767230423,0,0,0,0.386379188064381,0,0,0,0,17.5073071211291,11.0478056761722,19.4784474569395,14.7793736815571,10.2762377965596,6.7985450765073,6.75022500231806,7.65546045481175,9.9691329976525,10.8729665467882,0,0.399024873401031,1.19513524027894,1.45864030240976,0.628839487883947,0.919217542250071,0.666740183404846,0,0.962757628775446,2.02157769411038,1.2673964994512,1.88626341386076,1.591905626988,1.85672941974121,1.7230640686684,0.476293691283074,1.73826488917283,1.35036454324594,1.23625770240992,1.32479028120958,0.685738504770831,1.06485483695602,0.715308569841963,1.45346416632329,1.69396884747595,1.52306294205018,0.914639864363863,2.36762740294059,0.814824683075171,0.561142271657738,0.830445126869219,0.788035859004508,0.818462086339379,0.929621047115796,0.385813221962283,1.24905288968973,0.467863216890817,1.07435527024149,0.57386499620653,0.220591419119515,0.231867835620421
|short_description=p4@Arid4a
}}
}}

Latest revision as of 18:01, 26 September 2015

Short description:p4@Arid4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Arid4a_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 9bp_to_uc007nuf.1_5end
EntrezGene:Arid4a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Arid4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I26.28
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F17.66
cortex, adult.CNhs10473.12-14D513.56
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E813.88
hippocampus, neonate N00.CNhs11228.627-43G118.01
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A117.51
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A319.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.96e-3254
central nervous system9.80e-3273
nervous system1.95e-3075
neural tube5.92e-3052
neural rod5.92e-3052
future spinal cord5.92e-3052
neural keel5.92e-3052
brain2.22e-2947
future brain2.22e-2947
regional part of brain2.93e-2846
neurectoderm1.23e-2664
neural plate1.23e-2664
presumptive neural plate1.23e-2664
anterior neural tube6.47e-2640
regional part of forebrain6.72e-2539
forebrain6.72e-2539
future forebrain6.72e-2539
gray matter1.64e-2334
ectoderm-derived structure1.67e-2395
ectoderm1.67e-2395
presumptive ectoderm1.67e-2395
brain grey matter2.71e-2329
regional part of telencephalon2.71e-2329
telencephalon2.71e-2329
pre-chordal neural plate8.34e-2349
ecto-epithelium1.57e-2173
cerebral cortex3.75e-2021
cerebral hemisphere3.75e-2021
pallium3.75e-2021
regional part of cerebral cortex8.45e-1617
structure with developmental contribution from neural crest5.70e-1592
occipital lobe2.00e-1310
visual cortex2.00e-1310
neocortex2.00e-1310
tube1.23e-11114
anatomical conduit5.94e-10122
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