FFCP PHASE1:Mm9::chr13:19433797..19433810,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:19433797..19433810,+
|short_description=p4@uc007poy.1,p4@uc007poz.1
|description=CAGE_peak_4_at_uc007poy.1_5end,CAGE_peak_4_at_uc007poz.1_5end
|associatio...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=50 | |||
|TSSclassifier=NA | |||
|UniProt=A2J011 | |UniProt=A2J011 | ||
|association_with_transcript=-206bp_to_uc007poy.1,uc007poz.1_5end | |||
|cluster_id=chr13:19433797..19433810,+ | |||
|description=CAGE_peak_4_at_uc007poy.1_5end,CAGE_peak_4_at_uc007poz.1_5end | |||
|id=chr13:19433797..19433810,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.04e-21!23;UBERON:0000974!3.04e-21!23;UBERON:0004807!3.04e-21!23;UBERON:0005058!3.04e-21!23;UBERON:0003351!3.04e-21!23;UBERON:0009113!3.04e-21!23;UBERON:0003295!3.04e-21!23;UBERON:0009722!3.04e-21!23;UBERON:0005562!3.04e-21!23;UBERON:0007690!3.04e-21!23;UBERON:0006562!3.35e-20!24;UBERON:0003408!3.35e-20!24;UBERON:0001557!3.35e-20!24;UBERON:0001042!3.35e-20!24;UBERON:0008814!3.35e-20!24;UBERON:0009145!3.35e-20!24;UBERON:0000072!1.54e-17!27;UBERON:0004177!4.51e-16!29;UBERON:0000063!1.73e-14!35;UBERON:0000065!8.68e-12!41;UBERON:0001004!2.05e-11!42;UBERON:0002193!6.78e-11!48;UBERON:0002390!2.40e-10!45;UBERON:0003061!2.40e-10!45;UBERON:0005057!9.25e-09!51;UBERON:0003929!7.48e-08!55;UBERON:0002405!3.85e-07!70;UBERON:0002530!4.65e-07!65;UBERON:0002368!6.81e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.40e-10,23;UBERON:0000974,1.40e-10,23;UBERON:0004807,1.40e-10,23;UBERON:0005058,1.40e-10,23;UBERON:0003351,1.40e-10,23;UBERON:0009113,1.40e-10,23;UBERON:0003295,1.40e-10,23;UBERON:0009722,1.40e-10,23;UBERON:0005562,1.40e-10,23;UBERON:0007690,1.40e-10,23;UBERON:0006562,3.65e-10,24;UBERON:0003408,3.65e-10,24;UBERON:0001557,3.65e-10,24;UBERON:0001042,3.65e-10,24;UBERON:0008814,3.65e-10,24;UBERON:0009145,3.65e-10,24;UBERON:0000072,4.30e-09,27;UBERON:0004177,1.68e-08,29;UBERON:0005057,1.68e-08,29;UBERON:0000077,4.00e-07,35;UBERON:0007811,6.13e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0,50.5390941612506,78.0987369525417,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31399745568275,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0.608175645870493,0.924398614483445,1.55904987573354,1.61124026100733,1.98681354781265,0.721172697119813,0.443068581523732,0.403865799792591,0.457240839929999,0.705783295957884,0.682205165178267,0.673482891482306,0.818138315270983,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0,50.5390941612506,78.0987369525417,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31399745568275,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0.608175645870493,0.924398614483445,1.55904987573354,1.61124026100733,1.98681354781265,0.721172697119813,0.443068581523732,0.403865799792591,0.457240839929999,0.705783295957884,0.682205165178267,0.673482891482306,0.818138315270983,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p4@uc007poy.1,p4@uc007poz.1 | |||
}} | }} |
Latest revision as of 05:37, 27 September 2015
Short description: | p4@uc007poy.1, p4@uc007poz.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_uc007poy.1_5end, CAGE_peak_4_at_uc007poz.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | -206bp_to_uc007poy.1, uc007poz.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.40e-10 | 23 |
neck | 1.40e-10 | 23 |
respiratory system epithelium | 1.40e-10 | 23 |
hemolymphoid system gland | 1.40e-10 | 23 |
pharyngeal epithelium | 1.40e-10 | 23 |
thymic region | 1.40e-10 | 23 |
pharyngeal gland | 1.40e-10 | 23 |
entire pharyngeal arch endoderm | 1.40e-10 | 23 |
thymus primordium | 1.40e-10 | 23 |
early pharyngeal endoderm | 1.40e-10 | 23 |
pharynx | 3.65e-10 | 24 |
gland of gut | 3.65e-10 | 24 |
upper respiratory tract | 3.65e-10 | 24 |
chordate pharynx | 3.65e-10 | 24 |
pharyngeal arch system | 3.65e-10 | 24 |
pharyngeal region of foregut | 3.65e-10 | 24 |
segment of respiratory tract | 4.30e-09 | 27 |
hemopoietic organ | 1.68e-08 | 29 |
immune organ | 1.68e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 4.00e-07 | 35 |
craniocervical region | 6.13e-07 | 36 |