FFCP PHASE1:Mm9::chr13:36188729..36188734,+: Difference between revisions
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|id=chr13:36188729..36188734,+
|short_description=p@chr13:36188729..36188734,+
|description=CAGE_peak_at_chr13:36188729..36188734,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=131 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:36188729..36188734,+ | |||
|description=CAGE_peak_at_chr13:36188729..36188734,+ | |||
|id=chr13:36188729..36188734,+ | |||
|ontology_enrichment_celltype=CL:0000239!4.66e-28!6;CL:0000677!4.66e-28!6;CL:0000212!4.66e-28!6;CL:0000584!4.66e-28!6;CL:0000075!5.28e-24!7;CL:0002563!1.37e-18!9;CL:0002251!1.37e-18!9;CL:0000066!3.22e-11!25;CL:0002076!5.50e-11!15;CL:0000223!4.03e-08!20;CL:0000473!2.53e-07!3;CL:0000627!2.53e-07!3;CL:0000682!2.53e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.96e-09,6;CL:0000677,1.96e-09,6;CL:0000584,1.96e-09,6;CL:0000075,3.21e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.43e-37!15;UBERON:0001242!9.73e-29!13;UBERON:0000060!9.73e-29!13;UBERON:0001262!9.73e-29!13;UBERON:0004786!9.73e-29!13;UBERON:0004923!1.18e-22!24;UBERON:0003350!1.37e-18!9;UBERON:0004808!1.37e-18!9;UBERON:0001277!1.37e-18!9;UBERON:0000160!1.77e-16!43;UBERON:0000331!1.92e-15!3;UBERON:0002116!1.92e-15!3;UBERON:0001204!1.92e-15!3;UBERON:0001168!1.92e-15!3;UBERON:0000485!3.88e-15!11;UBERON:0005409!1.85e-11!59;UBERON:0001962!1.04e-10!2;UBERON:0001961!1.04e-10!2;UBERON:0001744!1.04e-10!2;UBERON:0002465!2.04e-07!3;UBERON:0001007!5.42e-07!128;UBERON:0001555!5.42e-07!128;UBERON:0007026!5.42e-07!128;UBERON:0004119!7.62e-07!130;UBERON:0000925!7.62e-07!130;UBERON:0006595!7.62e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.13e-30,15;UBERON:0001962,3.19e-25,2;UBERON:0001961,3.19e-25,2;UBERON:0001744,3.19e-25,2;UBERON:0004923,5.78e-19,24;UBERON:0000331,7.36e-18,3;UBERON:0002116,7.36e-18,3;UBERON:0001204,7.36e-18,3;UBERON:0001168,7.36e-18,3;UBERON:0002465,3.41e-17,3;UBERON:0001242,4.44e-16,13;UBERON:0001262,4.44e-16,13;UBERON:0004786,4.44e-16,13;UBERON:0002108,1.17e-13,4;UBERON:0003199,1.55e-13,1;UBERON:0000160,5.27e-07,31 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,2.72217790176147,4.50806156951712,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,1.27993938234725,1.37645568640302,1.72269589234506,0,0.430942465371778,7.60093677825496,2.01624103807945,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,0.909998478779072,2.72217790176147,4.50806156951712,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,1.27993938234725,1.37645568640302,1.72269589234506,0,0.430942465371778,7.60093677825496,2.01624103807945,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:36188729..36188734,+ | |||
}} | }} |
Latest revision as of 22:30, 5 August 2015
Short description: | p@chr13:36188729..36188734, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:36188729..36188734, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.96e-09 | 6 |
gut absorptive cell | 1.96e-09 | 6 |
enterocyte | 1.96e-09 | 6 |
columnar/cuboidal epithelial cell | 3.21e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.13e-30 | 15 |
gut-associated lymphoid tissue | 3.19e-25 | 2 |
mucosa-associated lymphoid tissue | 3.19e-25 | 2 |
lymphoid tissue | 3.19e-25 | 2 |
organ component layer | 5.78e-19 | 24 |
ileal mucosa | 7.36e-18 | 3 |
ileum | 7.36e-18 | 3 |
mucosa of small intestine | 7.36e-18 | 3 |
wall of small intestine | 7.36e-18 | 3 |
lymphoid system | 3.41e-17 | 3 |
intestinal mucosa | 4.44e-16 | 13 |
wall of intestine | 4.44e-16 | 13 |
gastrointestinal system mucosa | 4.44e-16 | 13 |
small intestine | 1.17e-13 | 4 |
egg chamber | 1.55e-13 | 1 |
intestine | 5.27e-07 | 31 |