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FFCP PHASE1:Mm9::chr13:96902523..96902583,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr13:96902523..96902583,-
|DHSsupport=NA
|short_description=p1@Sv2c
|DPIdataset=NA
|description=CAGE_peak_1_at_Sv2c_5end
|association_with_transcript=0bp_to_ENSMUST00000161263,NM_029210,uc007rmt.2_5end
|EntrezGene=75209
|EntrezGene=75209
|HGNC=
|HGNC=
|MCL_coexpression_id=464
|TSSclassifier=NA
|UniProt=Q69ZS6
|UniProt=Q69ZS6
|association_with_transcript=0bp_to_ENSMUST00000161263,NM_029210,uc007rmt.2_5end
|cluster_id=chr13:96902523..96902583,-
|description=CAGE_peak_1_at_Sv2c_5end
|id=chr13:96902523..96902583,-
|ontology_enrichment_celltype=CL:0000540!2.16e-09!33;CL:0000047!2.16e-09!33;CL:0000031!2.16e-09!33;CL:0000404!2.16e-09!33;CL:0000117!4.25e-08!23;CL:0000337!4.25e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000540,1.38e-10,33;CL:0000047,1.38e-10,33;CL:0000031,1.38e-10,33;CL:0000404,1.38e-10,33;CL:0000117,9.64e-10,23;CL:0000337,9.64e-10,23;CL:0000221,5.11e-08,44;CL:0000133,5.11e-08,44;CL:0002319,7.91e-08,43;CL:0000393,1.55e-07,39;CL:0000211,1.55e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!8.45e-18!102;UBERON:0000924!8.45e-18!102;UBERON:0006601!8.45e-18!102;UBERON:0000073!3.56e-17!75;UBERON:0001016!3.56e-17!75;UBERON:0002346!2.73e-16!71;UBERON:0003075!2.73e-16!71;UBERON:0007284!2.73e-16!71;UBERON:0001017!5.09e-16!73;UBERON:0005743!5.09e-16!73;UBERON:0001049!4.62e-13!52;UBERON:0005068!4.62e-13!52;UBERON:0006241!4.62e-13!52;UBERON:0007135!4.62e-13!52;UBERON:0000033!1.20e-12!63;UBERON:0000955!1.15e-11!50;UBERON:0006238!1.15e-11!50;UBERON:0002616!4.07e-11!49;UBERON:0002020!2.43e-10!34;UBERON:0003056!4.02e-10!49;UBERON:0003080!1.44e-08!40;UBERON:0002780!4.57e-08!39;UBERON:0001890!4.57e-08!39;UBERON:0006240!4.57e-08!39;UBERON:0002791!2.42e-07!29;UBERON:0003528!2.42e-07!29;UBERON:0001893!2.42e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.51e-21,75;UBERON:0001017,1.63e-19,73;UBERON:0004121,7.94e-18,95;UBERON:0000924,7.94e-18,95;UBERON:0006601,7.94e-18,95;UBERON:0000073,9.38e-17,54;UBERON:0002346,2.60e-16,64;UBERON:0003075,2.60e-16,64;UBERON:0007284,2.60e-16,64;UBERON:0001049,2.62e-15,52;UBERON:0005068,2.62e-15,52;UBERON:0006241,2.62e-15,52;UBERON:0007135,2.62e-15,52;UBERON:0002020,8.67e-13,34;UBERON:0010371,9.05e-13,73;UBERON:0000955,1.81e-11,47;UBERON:0006238,1.81e-11,47;UBERON:0002616,8.13e-11,46;UBERON:0010314,1.84e-10,92;UBERON:0003056,2.46e-10,49;UBERON:0003080,3.76e-09,40;UBERON:0003528,6.05e-09,29;UBERON:0002791,6.05e-09,29;UBERON:0001893,6.05e-09,29;UBERON:0002780,1.52e-08,39;UBERON:0001890,1.52e-08,39;UBERON:0006240,1.52e-08,39;UBERON:0003076,8.02e-08,12;UBERON:0003057,8.02e-08,12;UBERON:0002021,9.01e-08,10;UBERON:0000411,9.01e-08,10;UBERON:0001950,9.01e-08,10;UBERON:0002240,6.36e-07,6;UBERON:0005174,6.36e-07,6;UBERON:0001137,6.36e-07,6;UBERON:0002420,7.35e-07,8;UBERON:0007245,7.35e-07,8;UBERON:0010009,7.35e-07,8;UBERON:0010011,7.35e-07,8;UBERON:0000454,7.35e-07,8
|phase1_expression=0.640595388419176,0,0,0,0,1.17515490338323,1.16806320297763,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,4.76242424845991,0,0.261199789138935,0,0,0,0,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,8.9019242778223,16.398720357433,11.4089652631112,0.338844532069132,0.889294796111139,0,0,0,0,0,0.311068836925433,0,0,78.554020711046,77.9665949559196,0.244981598429908,0.383381884072945,1.83843757322004,33.0347642998166,24.0052195600153,35.329502648936,4.48413378282659,6.22115976496386,7.8137005583514,46.3443778342292,15.757353080887,29.9484565642548,81.0228610052586,73.7485306539353,37.0934897192348,24.2323818666189,10.6555899750568,0,0,0,0,0,0,2.10666630197628,0,0,0,1.83096445709685,0,0,0,0,0,0,1.48439043634778,0,0.29688427812965,3.29622120855658,5.78484408793068,2.99800146432876,5.42601505989441,8.34879820663504,0.251333182659351,0,0.578397427679647,0,0.485300549842228,0.220841518460394,0.484875253135222,0,17.5668478206928,16.127396424636,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,17.2259235315546,41.1750542536764,4.90051973240171,14.6012428961512,10.2286182932132,27.4280218818619,28.7167035629931,0.712875546952214,0,0.252722758433675,0.631325567659422,0.520481771850815,1.83921683546778,1.80062129805349,4.21973489940002,3.12967896096108,2.3060469651273,3.18585863503078,4.39795730256327,0.431135985865684,0.378212160335639,0.703804496655795,0.219195732427575,1.11218899690239,1.39300866608867,0.205782136407943,0.995171334092466,0,0,0,0.207125772535502,0,0.180062061461015,1.42046841351126,0.393528463494808,0.771335564436891,0.465067889500816,0.536546802799238,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,9.04246778825747,1.02904612379284,0,0,0.639864751605702,0.928946687441754,0.515469845288373,1.81515172161008,1.33426826306922,0.570676878337677,0,0.823494773620054,2.01068167040216,2.18852119245266,1.16978452271472,1.79763881730844,0.648414149624083,0.597423819763102,0,1.37098215131675,0,0.610953983535943,0.387904974335251,0.49095073923223,0,0,0,0,0,0,0,0.224862112384854,0.405720242777006,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0.814824882210129,0.678980343100753,0.938760993154008,0.670025029767263,0.476087281772027,0,0.315270288212382,0.221464689648775,0.478364305972461,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.551873492609465,77.8670361440791,83.5719325402409,0.163934945376675,0,0.315508219416257,1.56175497718655,1.29254038639679,1.91175038362042,5.12436950389506,7.92614286208731,1.21443210502468,2.04579100537918,3.55759000151871,20.5645642509957,0.567760340833074,0.890328018336276,1.14020871547503,0.494910368917606,0,0.485561272309963,0,0,0.590603785761546,0.614870295887855,0.775284879504663,0.727067458955011,1.06949213515416,0.632073515871632,1.05418608574999,0,0.680879211507576,0.18006109403131,0.129358683782755,0.428674070063185,0.532020700926821,2.14042581122485,2.30368628842969,3.95804433848979,1.64270195644597,0,4.85162475720916,0,0.322928853391811,0.180938774784468,0.119372344003136,0.328281799490123,0.291480836629851,100.685938991707,0,0.206386867963223,0,0,0,0,2.54967644990783,1.95932033253121,2.3493995546752,0,0.632671987162271,1.42323626988794,1.83609079397062,2.09088296014469,1.74690050996942,0.809186078308924,2.81021749466142,1.57053565190418,0.648074866458964,0,0.56369293868419,0,0.330916980914195,0,0.645799117388655,0.675824501963113,0.938857909166032,1.0416350787516,1.04859344425711,0.724752362478018,0.576060012515731,0,0.608175645870493,0.410843828659309,0,0.179026695667481,0,0.240390899039938,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,1.9318959403219,0.187682475451182,0.549454872801795,0.214368379079066,0,11.2950368523413,9.20650473014354,10.3121192419091,5.15559547031063,13.0165678756422,14.3524840504043,6.07520250208625,8.10578165803597,4.53142408984205,7.7664046762773,0.31136204275253,2.39414924040619,1.70733605754134,2.43106717068294,4.61148957781561,5.33146174505041,3.11145418922261,4.53277125925567,4.1719497246936,6.06473308233114,3.04175159868288,3.2066478035633,2.62196220915671,3.77748399188729,2.98664438569189,2.38146845641537,5.09891034157364,3.27945674788299,4.94503080963968,6.47675248591348,3.77156177623957,3.01708870470874,4.5302876089991,4.94177816549917,4.79957840118186,3.29996970777538,4.75612729469209,5.26139422875686,2.98769050460896,7.2948495315506,3.79632057997357,3.84167481264697,4.91077251803627,3.71848418846318,2.70069255373598,4.24677982494508,3.50897412668113,4.72716318906256,5.54736162999646,3.52946270591225,1.85494268496337
|phase1_expression=0.640595388419176,0,0,0,0,1.17515490338323,1.16806320297763,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,4.76242424845991,0,0.261199789138935,0,0,0,0,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,8.9019242778223,16.398720357433,11.4089652631112,0.338844532069132,0.889294796111139,0,0,0,0,0,0.311068836925433,0,0,78.554020711046,77.9665949559196,0.244981598429908,0.383381884072945,1.83843757322004,33.0347642998166,24.0052195600153,35.329502648936,4.48413378282659,6.22115976496386,7.8137005583514,46.3443778342292,15.757353080887,29.9484565642548,81.0228610052586,73.7485306539353,37.0934897192348,24.2323818666189,10.6555899750568,0,0,0,0,0,0,2.10666630197628,0,0,0,1.83096445709685,0,0,0,0,0,0,1.48439043634778,0,0.29688427812965,3.29622120855658,5.78484408793068,2.99800146432876,5.42601505989441,8.34879820663504,0.251333182659351,0,0.578397427679647,0,0.485300549842228,0.220841518460394,0.484875253135222,0,17.5668478206928,16.127396424636,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,17.2259235315546,41.1750542536764,4.90051973240171,14.6012428961512,10.2286182932132,27.4280218818619,28.7167035629931,0.712875546952214,0,0.252722758433675,0.631325567659422,0.520481771850815,1.83921683546778,1.80062129805349,4.21973489940002,3.12967896096108,2.3060469651273,3.18585863503078,4.39795730256327,0.431135985865684,0.378212160335639,0.703804496655795,0.219195732427575,1.11218899690239,1.39300866608867,0.205782136407943,0.995171334092466,0,0,0,0.207125772535502,0,0.180062061461015,1.42046841351126,0.393528463494808,0.771335564436891,0.465067889500816,0.536546802799238,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,9.04246778825747,1.02904612379284,0,0,0.639864751605702,0.928946687441754,0.515469845288373,1.81515172161008,1.33426826306922,0.570676878337677,0,0.823494773620054,2.01068167040216,2.18852119245266,1.16978452271472,1.79763881730844,0.648414149624083,0.597423819763102,0,1.37098215131675,0,0.610953983535943,0.387904974335251,0.49095073923223,0,0,0,0,0,0,0,0.224862112384854,0.405720242777006,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0.814824882210129,0.678980343100753,0.938760993154008,0.670025029767263,0.476087281772027,0,0.315270288212382,0.221464689648775,0.478364305972461,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.551873492609465,77.8670361440791,83.5719325402409,0.163934945376675,0,0.315508219416257,1.56175497718655,1.29254038639679,1.91175038362042,5.12436950389506,7.92614286208731,1.21443210502468,2.04579100537918,3.55759000151871,20.5645642509957,0.567760340833074,0.890328018336276,1.14020871547503,0.494910368917606,0,0.485561272309963,0,0,0.590603785761546,0.614870295887855,0.775284879504663,0.727067458955011,1.06949213515416,0.632073515871632,1.05418608574999,0,0.680879211507576,0.18006109403131,0.129358683782755,0.428674070063185,0.532020700926821,2.14042581122485,2.30368628842969,3.95804433848979,1.64270195644597,0,4.85162475720916,0,0.322928853391811,0.180938774784468,0.119372344003136,0.328281799490123,0.291480836629851,100.685938991707,0,0.206386867963223,0,0,0,0,2.54967644990783,1.95932033253121,2.3493995546752,0,0.632671987162271,1.42323626988794,1.83609079397062,2.09088296014469,1.74690050996942,0.809186078308924,2.81021749466142,1.57053565190418,0.648074866458964,0,0.56369293868419,0,0.330916980914195,0,0.645799117388655,0.675824501963113,0.938857909166032,1.0416350787516,1.04859344425711,0.724752362478018,0.576060012515731,0,0.608175645870493,0.410843828659309,0,0.179026695667481,0,0.240390899039938,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,1.9318959403219,0.187682475451182,0.549454872801795,0.214368379079066,0,11.2950368523413,9.20650473014354,10.3121192419091,5.15559547031063,13.0165678756422,14.3524840504043,6.07520250208625,8.10578165803597,4.53142408984205,7.7664046762773,0.31136204275253,2.39414924040619,1.70733605754134,2.43106717068294,4.61148957781561,5.33146174505041,3.11145418922261,4.53277125925567,4.1719497246936,6.06473308233114,3.04175159868288,3.2066478035633,2.62196220915671,3.77748399188729,2.98664438569189,2.38146845641537,5.09891034157364,3.27945674788299,4.94503080963968,6.47675248591348,3.77156177623957,3.01708870470874,4.5302876089991,4.94177816549917,4.79957840118186,3.29996970777538,4.75612729469209,5.26139422875686,2.98769050460896,7.2948495315506,3.79632057997357,3.84167481264697,4.91077251803627,3.71848418846318,2.70069255373598,4.24677982494508,3.50897412668113,4.72716318906256,5.54736162999646,3.52946270591225,1.85494268496337
|short_description=p1@Sv2c
}}
}}

Latest revision as of 14:01, 25 September 2015

Short description:p1@Sv2c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sv2c_5end
Coexpression cluster:MCL_coexpression_mm9:464
Association with transcript: 0bp_to_ENSMUST00000161263, NM_029210, uc007rmt.2_5end
EntrezGene:Sv2c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sv2c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C38.90
Mouse Granule cells, donor2.CNhs12357.11731-123E316.40
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F178.55
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D577.97
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D333.03
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.01
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.33
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.22
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E446.34
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I629.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D681.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F673.75
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E137.09
Mouse Schwann, donor1.CNhs12507.11728-123D924.23
Mouse Schwann, donor2.CNhs12573.11746-123F910.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F55.43
adrenal gland, neonate N00.CNhs11191.1311-23C18.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B217.57
cerebellum, neonate N30.CNhs11135.1395-42I216.13
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A417.23
corpus striatum, adult.CNhs10487.19-21D841.18
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D514.60
cortex, neonate N30.CNhs11107.1392-42F210.23
diencephalon, adult.CNhs10482.20-12F227.43
diencephalon, neonate N30.CNhs11201.1388-42B228.72
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E89.04
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C277.87
medulla oblongata, neonate N30.CNhs11200.1396-42A383.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I920.56
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F84.85
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C9100.69
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A92.81
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F25.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.38e-1033
neuronal stem cell1.38e-1033
neuroblast1.38e-1033
electrically signaling cell1.38e-1033
CNS neuron (sensu Vertebrata)9.64e-1023
neuroblast (sensu Vertebrata)9.64e-1023
ectodermal cell5.11e-0844
neurectodermal cell5.11e-0844
neural cell7.91e-0843
electrically responsive cell1.55e-0739
electrically active cell1.55e-0739

Uber anatomy
Ontology termp-valuen
nervous system5.51e-2175
central nervous system1.63e-1973
ectoderm-derived structure7.94e-1895
ectoderm7.94e-1895
presumptive ectoderm7.94e-1895
regional part of nervous system9.38e-1754
neurectoderm2.60e-1664
neural plate2.60e-1664
presumptive neural plate2.60e-1664
neural tube2.62e-1552
neural rod2.62e-1552
future spinal cord2.62e-1552
neural keel2.62e-1552
gray matter8.67e-1334
ecto-epithelium9.05e-1373
brain1.81e-1147
future brain1.81e-1147
regional part of brain8.13e-1146
structure with developmental contribution from neural crest1.84e-1092
pre-chordal neural plate2.46e-1049
anterior neural tube3.76e-0940
brain grey matter6.05e-0929
regional part of telencephalon6.05e-0929
telencephalon6.05e-0929
regional part of forebrain1.52e-0839
forebrain1.52e-0839
future forebrain1.52e-0839
posterior neural tube8.02e-0812
chordal neural plate8.02e-0812
occipital lobe9.01e-0810
visual cortex9.01e-0810
neocortex9.01e-0810
spinal cord6.36e-076
dorsal region element6.36e-076
dorsum6.36e-076
basal ganglion7.35e-078
nuclear complex of neuraxis7.35e-078
aggregate regional part of brain7.35e-078
collection of basal ganglia7.35e-078
cerebral subcortex7.35e-078
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