FFCP PHASE1:Mm9::chr14:121434760..121434797,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:121434760..121434797,+
|short_description=p1@Farp1
|description=CAGE_peak_1_at_Farp1_5end
|association_with_transcript=0bp_to_ENSMUST00000026635,NM_134082...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=223254 | |EntrezGene=223254 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F8VPU2,Q8BM51,C4IXU2 | |UniProt=F8VPU2,Q8BM51,C4IXU2 | ||
|association_with_transcript=0bp_to_ENSMUST00000026635,NM_134082,uc007vaa.1_5end | |||
|cluster_id=chr14:121434760..121434797,+ | |||
|description=CAGE_peak_1_at_Farp1_5end | |||
|id=chr14:121434760..121434797,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.71e-09!50;CL:0002319!3.03e-08!43;CL:0002321!3.50e-08!70;CL:0000220!3.50e-08!70;CL:0000221!4.88e-08!44;CL:0000133!4.88e-08!44;CL:0000393!3.16e-07!39;CL:0000211!3.16e-07!39;CL:0000117!3.77e-07!23;CL:0000337!3.77e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.01e-08,43;CL:0002321,3.48e-08,70;CL:0000221,4.84e-08,44;CL:0000133,4.84e-08,44;CL:0000393,3.14e-07,39;CL:0000211,3.14e-07,39;CL:0000117,3.74e-07,23;CL:0000337,3.74e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.67e-13!73;UBERON:0005743!1.67e-13!73;UBERON:0000073!2.12e-12!75;UBERON:0001016!2.12e-12!75;UBERON:0001049!1.33e-10!52;UBERON:0005068!1.33e-10!52;UBERON:0006241!1.33e-10!52;UBERON:0007135!1.33e-10!52;UBERON:0000955!1.70e-10!50;UBERON:0006238!1.70e-10!50;UBERON:0004121!2.68e-10!102;UBERON:0000924!2.68e-10!102;UBERON:0006601!2.68e-10!102;UBERON:0002616!5.17e-10!49;UBERON:0002780!8.64e-10!39;UBERON:0001890!8.64e-10!39;UBERON:0006240!8.64e-10!39;UBERON:0003080!1.42e-09!40;UBERON:0000033!1.83e-08!63;UBERON:0002020!2.98e-08!34;UBERON:0003056!3.13e-08!49;UBERON:0000468!1.47e-07!333;UBERON:0002791!1.51e-07!29;UBERON:0003528!1.51e-07!29;UBERON:0001893!1.51e-07!29;UBERON:0002346!3.55e-07!71;UBERON:0003075!3.55e-07!71;UBERON:0007284!3.55e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.64e-13,73;UBERON:0004121,1.97e-12,95;UBERON:0000924,1.97e-12,95;UBERON:0006601,1.97e-12,95;UBERON:0001016,2.10e-12,75;UBERON:0000073,8.00e-11,54;UBERON:0001049,1.32e-10,52;UBERON:0005068,1.32e-10,52;UBERON:0006241,1.32e-10,52;UBERON:0007135,1.32e-10,52;UBERON:0000955,2.21e-10,47;UBERON:0006238,2.21e-10,47;UBERON:0010371,2.41e-10,73;UBERON:0002616,6.79e-10,46;UBERON:0002780,8.56e-10,39;UBERON:0001890,8.56e-10,39;UBERON:0006240,8.56e-10,39;UBERON:0003080,1.40e-09,40;UBERON:0002346,2.59e-09,64;UBERON:0003075,2.59e-09,64;UBERON:0007284,2.59e-09,64;UBERON:0002020,2.96e-08,34;UBERON:0003056,3.11e-08,49;UBERON:0003528,1.50e-07,29;UBERON:0002791,1.50e-07,29;UBERON:0001893,1.50e-07,29 | |||
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| ||
|short_description=p1@Farp1 | |||
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Latest revision as of 16:46, 25 September 2015
Short description: | p1@Farp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Farp1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000026635, NM_134082, uc007vaa.1_5end |
EntrezGene: | Farp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.01e-08 | 43 |
embryonic cell | 3.48e-08 | 70 |
ectodermal cell | 4.84e-08 | 44 |
neurectodermal cell | 4.84e-08 | 44 |
electrically responsive cell | 3.14e-07 | 39 |
electrically active cell | 3.14e-07 | 39 |
CNS neuron (sensu Vertebrata) | 3.74e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.74e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.64e-13 | 73 |
ectoderm-derived structure | 1.97e-12 | 95 |
ectoderm | 1.97e-12 | 95 |
presumptive ectoderm | 1.97e-12 | 95 |
nervous system | 2.10e-12 | 75 |
regional part of nervous system | 8.00e-11 | 54 |
neural tube | 1.32e-10 | 52 |
neural rod | 1.32e-10 | 52 |
future spinal cord | 1.32e-10 | 52 |
neural keel | 1.32e-10 | 52 |
brain | 2.21e-10 | 47 |
future brain | 2.21e-10 | 47 |
ecto-epithelium | 2.41e-10 | 73 |
regional part of brain | 6.79e-10 | 46 |
regional part of forebrain | 8.56e-10 | 39 |
forebrain | 8.56e-10 | 39 |
future forebrain | 8.56e-10 | 39 |
anterior neural tube | 1.40e-09 | 40 |
neurectoderm | 2.59e-09 | 64 |
neural plate | 2.59e-09 | 64 |
presumptive neural plate | 2.59e-09 | 64 |
gray matter | 2.96e-08 | 34 |
pre-chordal neural plate | 3.11e-08 | 49 |
brain grey matter | 1.50e-07 | 29 |
regional part of telencephalon | 1.50e-07 | 29 |
telencephalon | 1.50e-07 | 29 |