FFCP PHASE1:Mm9::chr15:36538549..36538557,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:36538549..36538557,-
|short_description=p11@Pabpc1
|description=CAGE_peak_11_at_Pabpc1_5end
|association_with_transcript=170bp_to_ENSMUST00000001809,ENSMU...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18458 | |EntrezGene=18458 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P29341,Q3V2M1 | |UniProt=P29341,Q3V2M1 | ||
|association_with_transcript=170bp_to_ENSMUST00000001809,ENSMUST00000146327,NM_008774,uc007vmx.2,uc007vmy.2_5end | |||
|cluster_id=chr15:36538549..36538557,- | |||
|description=CAGE_peak_11_at_Pabpc1_5end | |||
|id=chr15:36538549..36538557,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.07e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.92e-12,6;UBERON:0004457,8.92e-12,6;UBERON:0000042,8.92e-12,6;UBERON:0004854,8.92e-12,6;UBERON:0009034,8.92e-12,6;UBERON:0002095,8.92e-12,6;UBERON:0004782,8.92e-12,6;UBERON:0003281,8.92e-12,6;UBERON:0009664,8.92e-12,6;UBERON:0002296,8.92e-12,6;UBERON:0005602,8.92e-12,6;UBERON:0001179,8.92e-12,6;UBERON:0006293,8.92e-12,6;UBERON:0004923,6.18e-08,24;UBERON:0003887,4.13e-07,10 | |||
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| ||
|short_description=p11@Pabpc1 | |||
}} | }} |
Latest revision as of 18:10, 26 September 2015
Short description: | p11@Pabpc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Pabpc1_5end |
Coexpression cluster: | NA |
Association with transcript: | 170bp_to_ENSMUST00000001809, ENSMUST00000146327, NM_008774, uc007vmx.2, uc007vmy.2_5end |
EntrezGene: | Pabpc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.07e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.92e-12 | 6 |
cavity lining | 8.92e-12 | 6 |
serous membrane | 8.92e-12 | 6 |
gastrointestinal system mesentery | 8.92e-12 | 6 |
stomach region | 8.92e-12 | 6 |
mesentery | 8.92e-12 | 6 |
gastrointestinal system serosa | 8.92e-12 | 6 |
mesentery of stomach | 8.92e-12 | 6 |
gut mesentery | 8.92e-12 | 6 |
dorsal mesentery | 8.92e-12 | 6 |
dorsal mesogastrium | 8.92e-12 | 6 |
peritoneal cavity | 8.92e-12 | 6 |
spleen primordium | 8.92e-12 | 6 |
organ component layer | 6.18e-08 | 24 |
intraembryonic coelom | 4.13e-07 | 10 |