CL:0000226: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=single nucleate cell | |name=single nucleate cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:32, 12 September 2014
| Name: | single nucleate cell |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A cell with a single nucleus." [FB:ma, GOC:tfm] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002242(nucleate cell) |
|---|
Children
| is a: | CL:0000842 (mononuclear cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11231-116C7 (Peripheral Blood Mononuclear Cells, donor1)
- 11312-117C7 (Peripheral Blood Mononuclear Cells, donor2)
- 11388-118C2 (Peripheral Blood Mononuclear Cells, donor3)
Mouse (Mus musculus)
- 11231-116C7 (Peripheral Blood Mononuclear Cells, donor1)
- 11312-117C7 (Peripheral Blood Mononuclear Cells, donor2)
- 11388-118C2 (Peripheral Blood Mononuclear Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000226 (single nucleate cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.43e-65 | FFCP PHASE2:Hg19::chr3:16337109..16337111,+#_0fe8b1ffc4f476c6c2f57571f82ff9b3 | p@chr3:16337109..16337111, + |
| 1.43e-65 | FFCP PHASE1:Hg19::chr3:16337109..16337111,+#_0fe8b1ffc4f476c6c2f57571f82ff9b3 | p@chr3:16337109..16337111, + |
| 1.83e-59 | FFCP PHASE2:Hg19::chr1:25238094..25238098,+#_38578f74962c80133cf9db2811e94ae7 | p@chr1:25238094..25238098, + |
| 1.83e-59 | FFCP PHASE1:Hg19::chr9:132536282..132536289,+#_38578f74962c80133cf9db2811e94ae7 | p@chr9:132536282..132536289, + |
| 1.83e-59 | FFCP PHASE2:Hg19::chr9:132536282..132536289,+#_38578f74962c80133cf9db2811e94ae7 | p@chr9:132536282..132536289, + |
| 1.83e-59 | FFCP PHASE1:Hg19::chr1:25238094..25238098,+#_38578f74962c80133cf9db2811e94ae7 | p@chr1:25238094..25238098, + |
| 3.13e-54 | FFCP PHASE1:Hg19::chr22:30673870..30673880,+#_cf118b77c8d982b501c5030251b71584 | p@chr22:30673870..30673880, + |
| 3.13e-54 | FFCP PHASE2:Hg19::chr22:30673870..30673880,+#_cf118b77c8d982b501c5030251b71584 | p@chr22:30673870..30673880, + |
| 6.5e-54 | FFCP PHASE1:Hg19::chr8:27265868..27265877,-#_806f7f740f070b1f31d0d2a340b14253 | p@chr8:27265868..27265877, - |
| 6.5e-54 | FFCP PHASE2:Hg19::chr8:27265868..27265877,-#_806f7f740f070b1f31d0d2a340b14253 | p@chr8:27265868..27265877, - |
| 1.97e-49 | FFCP PHASE2:Hg19::chr17:74593998..74594009,-#_ebb0d5580a2cc808349d550a70e4d219 | p@chr17:74593998..74594009, - |
| 1.97e-49 | FFCP PHASE1:Hg19::chr17:74593998..74594009,-#_ebb0d5580a2cc808349d550a70e4d219 | p@chr17:74593998..74594009, - |
| 2.33e-49 | FFCP PHASE2:Hg19::chr13:31288341..31288344,-#_a9576a135be2ba36ca3cac5cbe300b64 | p@chr13:31288341..31288344, - |
| 2.33e-49 | FFCP PHASE1:Hg19::chr13:31288341..31288344,-#_a9576a135be2ba36ca3cac5cbe300b64 | p@chr13:31288341..31288344, - |
| 3.06e-46 | FFCP PHASE2:Hg19::chr20:23136099..23136105,+#_3c24ccfc6e153ba7de5fbb43fe77a12c | p@chr20:23136099..23136105, + |
| 3.06e-46 | FFCP PHASE1:Hg19::chr20:23136099..23136105,+#_3c24ccfc6e153ba7de5fbb43fe77a12c | p@chr20:23136099..23136105, + |
| 1.23e-45 | FFCP PHASE2:Hg19::chr5:53967032..53967048,-#_2172d9979254e67847c04a5116dbee75 | p@chr5:53967032..53967048, - |
| 1.23e-45 | FFCP PHASE1:Hg19::chr5:53967032..53967048,-#_2172d9979254e67847c04a5116dbee75 | p@chr5:53967032..53967048, - |
| 1.67e-45 | FFCP PHASE2:Hg19::chr17:80085705..80085716,-#_37e2e9f10834a67d71d35d009d5d054d | p@chr17:80085705..80085716, - |
| 1.67e-45 | FFCP PHASE1:Hg19::chr17:80085705..80085716,-#_37e2e9f10834a67d71d35d009d5d054d | p@chr17:80085705..80085716, - |
| 2.38e-44 | FFCP PHASE1:Hg19::chr6:14598755..14598797,-#_997f7d8ce4d5004f6d880d5899a1cfae | p@chr6:14598755..14598797, - |
| 2.38e-44 | FFCP PHASE2:Hg19::chr6:14598755..14598797,-#_997f7d8ce4d5004f6d880d5899a1cfae | p@chr6:14598755..14598797, - |
| 1.43e-42 | FFCP PHASE1:Hg19::chr4:26220615..26220664,-#_8cdc475f8119de133654e2a7637af0bb | p@chr4:26220615..26220664, - |
| 1.43e-42 | FFCP PHASE2:Hg19::chr4:26220615..26220664,-#_8cdc475f8119de133654e2a7637af0bb | p@chr4:26220615..26220664, - |
| 2.54e-42 | FFCP PHASE1:Hg19::chr13:31289054..31289070,+#_ac408f7cbdb495eb67cc083793b56e7d | p@chr13:31289054..31289070, + |
| 2.54e-42 | FFCP PHASE1:Hg19::chr2:242051009..242051013,+#_ac408f7cbdb495eb67cc083793b56e7d | p@chr2:242051009..242051013, + |
| 2.54e-42 | FFCP PHASE2:Hg19::chr13:31289054..31289070,+#_ac408f7cbdb495eb67cc083793b56e7d | p@chr13:31289054..31289070, + |
| 2.54e-42 | FFCP PHASE2:Hg19::chr2:242051009..242051013,+#_ac408f7cbdb495eb67cc083793b56e7d | p@chr2:242051009..242051013, + |
| 2.56e-40 | FFCP PHASE1:Hg19::chr9:132543512..132543535,-#_ad531a6085e2307743d65d2a09416722 | p@chr9:132543512..132543535, - |
| 2.56e-40 | FFCP PHASE2:Hg19::chr9:132543512..132543535,-#_ad531a6085e2307743d65d2a09416722 | p@chr9:132543512..132543535, - |
| 3.35e-40 | FFCP PHASE2:Hg19::chr21:16251857..16251872,-#_8306fda3f5074697eba2b3ecaf27bab1 | p@chr21:16251857..16251872, - |
| 3.35e-40 | FFCP PHASE1:Hg19::chr21:16251857..16251872,-#_8306fda3f5074697eba2b3ecaf27bab1 | p@chr21:16251857..16251872, - |
| 5.01e-40 | FFCP PHASE2:Hg19::chr7:106039339..106039343,-#_8a3ef0f6f1963fa377ab31ebc69d5b9a | p@chr7:106039339..106039343, - |
| 5.01e-40 | FFCP PHASE1:Hg19::chr7:106039339..106039343,-#_8a3ef0f6f1963fa377ab31ebc69d5b9a | p@chr7:106039339..106039343, - |
| 1.12e-39 | FFCP PHASE2:Hg19::chr16:81476783..81476798,+#_39219bdbada25ae4ec0f5603f1af6005 | p@chr16:81476783..81476798, + |
| 1.12e-39 | FFCP PHASE1:Hg19::chr16:81476783..81476798,+#_39219bdbada25ae4ec0f5603f1af6005 | p@chr16:81476783..81476798, + |
| 3.48e-38 | FFCP PHASE2:Hg19::chr16:11655016..11655021,+#_91357e7cee21d6547f9d87fc47cd01cb | p@chr16:11655016..11655021, + |
| 3.48e-38 | FFCP PHASE1:Hg19::chr16:11655016..11655021,+#_91357e7cee21d6547f9d87fc47cd01cb | p@chr16:11655016..11655021, + |
| 4.67e-38 | FFCP PHASE2:Hg19::chr10:29922542..29922549,+#_aaecaccb69f0209b9e7d85ffdce9ccbb | p@chr10:29922542..29922549, + |
| 4.67e-38 | FFCP PHASE1:Hg19::chr10:125795831..125795840,+#_aaecaccb69f0209b9e7d85ffdce9ccbb | p@chr10:125795831..125795840, + |
| 4.67e-38 | FFCP PHASE1:Hg19::chr5:53972410..53972425,-#_aaecaccb69f0209b9e7d85ffdce9ccbb | p@chr5:53972410..53972425, - |
| 4.67e-38 | FFCP PHASE1:Hg19::chr10:29922542..29922549,+#_aaecaccb69f0209b9e7d85ffdce9ccbb | p@chr10:29922542..29922549, + |
| 4.67e-38 | FFCP PHASE2:Hg19::chr10:125795831..125795840,+#_aaecaccb69f0209b9e7d85ffdce9ccbb | p@chr10:125795831..125795840, + |
| 4.67e-38 | FFCP PHASE2:Hg19::chr5:53972410..53972425,-#_aaecaccb69f0209b9e7d85ffdce9ccbb | p@chr5:53972410..53972425, - |
| 7.42e-38 | FFCP PHASE1:Hg19::chr9:110250603..110250614,-#_4250677b0978ef323d73366b66d80ed8 | p24@KLF4 |
| 7.42e-38 | FFCP PHASE2:Hg19::chr9:110250603..110250614,-#_4250677b0978ef323d73366b66d80ed8 | p24@KLF4 |
| 1.23e-37 | FFCP PHASE1:Hg19::chr9:93847742..93847748,-#_d1903863237931fc216108a582f1c69a | p@chr9:93847742..93847748, - |
| 1.23e-37 | FFCP PHASE2:Hg19::chr9:93847742..93847748,-#_d1903863237931fc216108a582f1c69a | p@chr9:93847742..93847748, - |
| 2.03e-37 | FFCP PHASE2:Hg19::chr13:114908634..114908638,-#_4b6670a9b757a4ea68cf0937ef2707fe | p@chr13:114908634..114908638, - |
| 2.03e-37 | FFCP PHASE1:Hg19::chr13:114908634..114908638,-#_4b6670a9b757a4ea68cf0937ef2707fe | p@chr13:114908634..114908638, - |
| 3.79e-37 | FFCP PHASE1:Hg19::chr5:171535614..171535618,-#_f3618515bab1a08e60c25f379079ab15 | p9@STK10 |
| 3.79e-37 | FFCP PHASE2:Hg19::chr5:171535614..171535618,-#_f3618515bab1a08e60c25f379079ab15 | p9@STK10 |
| 6.23e-37 | FFCP PHASE1:Hg19::chr22:50740830..50740842,+#_b5a5c2d7c3f0885f9a43f90021b88893 | p@chr22:50740830..50740842, + |
| 6.23e-37 | FFCP PHASE2:Hg19::chr22:50740830..50740842,+#_b5a5c2d7c3f0885f9a43f90021b88893 | p@chr22:50740830..50740842, + |
| 1.4e-35 | FFCP PHASE2:Hg19::chr11:693022..693033,-#_8d3002717ec0ab4d0ba4fc0c3b69dc39 | p@chr11:693022..693033, - |
| 1.4e-35 | FFCP PHASE1:Hg19::chr11:693022..693033,-#_8d3002717ec0ab4d0ba4fc0c3b69dc39 | p@chr11:693022..693033, - |
| 1.77e-35 | FFCP PHASE1:Hg19::chr8:29953118..29953123,+#_5213f097ec67ff69900ff895d019b4c3 | p7@LEPROTL1 |
| 1.77e-35 | FFCP PHASE2:Hg19::chr8:29953118..29953123,+#_5213f097ec67ff69900ff895d019b4c3 | p7@LEPROTL1 |
| 2.85e-35 | FFCP PHASE2:Hg19::chr17:80084484..80084497,-#_d65723b9ecf46ddae5ac2ac293525b66 | p@chr17:80084484..80084497, - |
| 2.85e-35 | FFCP PHASE1:Hg19::chr17:80084484..80084497,-#_d65723b9ecf46ddae5ac2ac293525b66 | p@chr17:80084484..80084497, - |
| 3.2e-35 | FFCP PHASE2:Hg19::chr3:101568018..101568039,-#_3d6b3901e5c7a998b9a51622db490eec | p@chr3:101568018..101568039, - |
| 3.2e-35 | FFCP PHASE1:Hg19::chr3:101568018..101568039,-#_3d6b3901e5c7a998b9a51622db490eec | p@chr3:101568018..101568039, - |
| 4.05e-35 | FFCP PHASE1:Hg19::chr17:80085735..80085746,-#_4ba8dd60c54c4d26982c2395eb537935 | p@chr17:80085735..80085746, - |
| 4.05e-35 | FFCP PHASE2:Hg19::chr17:80085735..80085746,-#_4ba8dd60c54c4d26982c2395eb537935 | p@chr17:80085735..80085746, - |
| 4.56e-35 | FFCP PHASE2:Hg19::chr19:58838845..58838863,-#_506e25a66082fb49bf91ca21589cc10a | p@chr19:58838845..58838863, - |
| 4.56e-35 | FFCP PHASE1:Hg19::chr19:58838845..58838863,-#_506e25a66082fb49bf91ca21589cc10a | p@chr19:58838845..58838863, - |
| 5.76e-35 | FFCP PHASE2:Hg19::chr19:52239330..52239340,-#_160a5c2d8559c87e340de097c22f0718 | p@chr19:52239330..52239340, - |
| 5.76e-35 | FFCP PHASE1:Hg19::chr19:52239330..52239340,-#_160a5c2d8559c87e340de097c22f0718 | p@chr19:52239330..52239340, - |
| 3.33e-34 | FFCP PHASE2:Hg19::chr12:98831630..98831637,-#_8cce2a1c37b6e2dfa843fda12a028793 | p@chr12:98831630..98831637, - |
| 3.33e-34 | FFCP PHASE1:Hg19::chr12:98831630..98831637,-#_8cce2a1c37b6e2dfa843fda12a028793 | p@chr12:98831630..98831637, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr10:73538946..73538954,+#_f07c4554ffbd2c0e0eebd6cd548356dd | p@chr10:73538946..73538954, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr10:73538946..73538954,+#_f07c4554ffbd2c0e0eebd6cd548356dd | p@chr10:73538946..73538954, + |
| 7.7e-34 | FFCP PHASE2:Hg19::chr10:32040654..32040692,+#_df97864530db182fc1fe63078e7c854a | p@chr10:32040654..32040692, + |
| 7.7e-34 | FFCP PHASE2:Hg19::chr2:85923157..85923172,-#_df97864530db182fc1fe63078e7c854a | p@chr2:85923157..85923172, - |
| 7.7e-34 | FFCP PHASE1:Hg19::chr10:32040654..32040692,+#_df97864530db182fc1fe63078e7c854a | p@chr10:32040654..32040692, + |
| 7.7e-34 | FFCP PHASE1:Hg19::chr2:85923157..85923172,-#_df97864530db182fc1fe63078e7c854a | p@chr2:85923157..85923172, - |
| 1.08e-33 | FFCP PHASE1:Hg19::chr1:12662045..12662059,-#_420985089497d1e71c87d85c2b165125 | p@chr1:12662045..12662059, - |
| 1.08e-33 | FFCP PHASE2:Hg19::chr17:80085902..80085908,+#_420985089497d1e71c87d85c2b165125 | p@chr17:80085902..80085908, + |
| 1.08e-33 | FFCP PHASE1:Hg19::chr17:80085902..80085908,+#_420985089497d1e71c87d85c2b165125 | p@chr17:80085902..80085908, + |
| 1.08e-33 | FFCP PHASE2:Hg19::chr1:12662045..12662059,-#_420985089497d1e71c87d85c2b165125 | p@chr1:12662045..12662059, - |
| 1.18e-33 | FFCP PHASE2:Hg19::chr1:235116230..235116241,-#_c44274fa4e6db7f45cdfe38678e24522 | p@chr1:235116230..235116241, - |
| 1.18e-33 | FFCP PHASE1:Hg19::chr1:235116230..235116241,-#_c44274fa4e6db7f45cdfe38678e24522 | p@chr1:235116230..235116241, - |
| 1.27e-33 | FFCP PHASE1:Hg19::chr14:62036506..62036511,-#_11a64abe7396d6c3075a06ab7546d654 | p@chr14:62036506..62036511, - |
| 1.27e-33 | FFCP PHASE2:Hg19::chr14:62036506..62036511,-#_11a64abe7396d6c3075a06ab7546d654 | p@chr14:62036506..62036511, - |
| 1.48e-33 | FFCP PHASE1:Hg19::chr4:15964231..15964260,+#_2c3e149c56b6f1285d4c1331ddaad5d6 | p1@CU693033 |
| 1.48e-33 | FFCP PHASE2:Hg19::chr4:15964231..15964260,+#_2c3e149c56b6f1285d4c1331ddaad5d6 | p1@CU693033 |
| 1.65e-33 | FFCP PHASE1:Hg19::chr12:10564247..10564267,-#_1b7a889a915ddbe603a9c82ef179c7ec | p@chr12:10564247..10564267, - |
| 1.65e-33 | FFCP PHASE2:Hg19::chr12:10564247..10564267,-#_1b7a889a915ddbe603a9c82ef179c7ec | p@chr12:10564247..10564267, - |
| 2.07e-33 | FFCP PHASE1:Hg19::chr10:126339660..126339674,+#_68bdc28992b5c569cbe58585403399f3 | p@chr10:126339660..126339674, + |
| 2.07e-33 | FFCP PHASE2:Hg19::chr10:126339660..126339674,+#_68bdc28992b5c569cbe58585403399f3 | p@chr10:126339660..126339674, + |
| 2.31e-33 | FFCP PHASE1:Hg19::chr7:3157659..3157673,-#_9c9fdfcb5128745d469cd3ea5e6082c0 | p@chr7:3157659..3157673, - |
| 2.31e-33 | FFCP PHASE2:Hg19::chr7:3157659..3157673,-#_9c9fdfcb5128745d469cd3ea5e6082c0 | p@chr7:3157659..3157673, - |
| 2.31e-33 | FFCP PHASE1:Hg19::chr9:136709727..136709738,+#_9c9fdfcb5128745d469cd3ea5e6082c0 | p@chr9:136709727..136709738, + |
| 2.31e-33 | FFCP PHASE2:Hg19::chr9:136709727..136709738,+#_9c9fdfcb5128745d469cd3ea5e6082c0 | p@chr9:136709727..136709738, + |
| 2.58e-33 | FFCP PHASE2:Hg19::chr11:118741219..118741230,+#_0a01630181ad61d90479646886351a83 | p@chr11:118741219..118741230, + |
| 2.58e-33 | FFCP PHASE2:Hg19::chr17:80840881..80840895,+#_0a01630181ad61d90479646886351a83 | p@chr17:80840881..80840895, + |
| 2.58e-33 | FFCP PHASE1:Hg19::chr17:80840881..80840895,+#_0a01630181ad61d90479646886351a83 | p@chr17:80840881..80840895, + |
| 2.58e-33 | FFCP PHASE1:Hg19::chr11:118741219..118741230,+#_0a01630181ad61d90479646886351a83 | p@chr11:118741219..118741230, + |
| 3.61e-33 | FFCP PHASE2:Hg19::chr16:81557949..81557960,-#_71446ab992f836f2774a4f62373a3522 | p@chr16:81557949..81557960, - |
| 3.61e-33 | FFCP PHASE1:Hg19::chr16:81557949..81557960,-#_71446ab992f836f2774a4f62373a3522 | p@chr16:81557949..81557960, - |
