UBERON:0000083: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=mesonephric tubule | |name=mesonephric tubule | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000080 | |part_of=UBERON:0000080 | ||
Latest revision as of 17:06, 12 September 2014
| Name: | mesonephric tubule | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A mesonephric tubule is an epithelial tube that is part of the mesonephros[GO]. Genital ridge that is next to the mesonephros[WP]." [Wikipedia:Mesonephric_tubules] | ||
| Xrefs: |
| ||
| Synonyms: | "tubuli mesonephrici" RELATED LATIN [Wikipedia:Mesonephric_tubules] | ||
| Comments: | TODO check |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003914(epithelial tube),UBERON:0005103(mesonephric epithelium),UBERON:0006555(excretory tube) |
|---|---|
| part_of: | UBERON:0000080(mesonephros) |
Children
| is a: | UBERON:0000084 (ureteric bud),UBERON:0003074 (mesonephric duct) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000083 (mesonephric tubule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_820dac00011a0f37d66f1bb1ee8d23e8 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_820dac00011a0f37d66f1bb1ee8d23e8 | p4@Spink12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35585507..35585517,-#_a864da2db5f3afbc8f42cb20d942e524 | p4@Gm17727 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:96140694..96140720,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr11:96140694..96140720, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:70761885..70761895,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr9:70761885..70761895, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:75559819..75559830,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr5:75559819..75559830, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:59845376..59845393,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr11:59845376..59845393, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:74784728..74784738,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr18:74784728..74784738, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:87922778..87922788,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:87922778..87922788, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26688157..26688159,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr9:26688157..26688159, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:116399500..116399516,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr10:116399500..116399516, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:52542661..52542668,-#_a864da2db5f3afbc8f42cb20d942e524 | p3@Rnase13 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:103746280..103746298,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr14:103746280..103746298, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141447..19141469,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr8:19141447..19141469, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:130496372..130496393,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:130496372..130496393, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:23683348..23683398,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:23683348..23683398, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:110131571..110131579,-#_a864da2db5f3afbc8f42cb20d942e524 | p15@Wars |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19141429..19141440,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr8:19141429..19141440, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:43230846..43230884,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr16:43230846..43230884, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:34813361..34813403,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr9:34813361..34813403, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:34107586..34107593,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr11:34107586..34107593, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:56515486..56515496,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr10:56515486..56515496, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90155966..90155989,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:90155966..90155989, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378774..21378782,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:21378774..21378782, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51627616..51627623,+#_a864da2db5f3afbc8f42cb20d942e524 | p2@Rnase10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:50280152..50280179,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:50280152..50280179, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379878..31379883,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr5:31379878..31379883, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:103276578..103276585,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:103276578..103276585, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379118..21379120,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:21379118..21379120, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:52712744..52712754,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:52712744..52712754, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:74440187..74440209,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr2:74440187..74440209, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26611214..26611227,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr9:26611214..26611227, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379322..21379338,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:21379322..21379338, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19062951..19062955,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr8:19062951..19062955, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379477..31379481,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr5:31379477..31379481, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:110773580..110773589,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr5:110773580..110773589, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:44264128..44264135,+#_a864da2db5f3afbc8f42cb20d942e524 | p5@Spink12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:118298429..118298448,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr6:118298429..118298448, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:116901540..116901549,-#_a864da2db5f3afbc8f42cb20d942e524 | p4@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:89597834..89597840,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:89597834..89597840, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:155738967..155738974,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:155738967..155738974, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:116901629..116901639,-#_a864da2db5f3afbc8f42cb20d942e524 | p3@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164479326..164479336,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr2:164479326..164479336, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:148625223..148625234,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr2:148625223..148625234, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21378871..21378901,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:21378871..21378901, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:14306714..14306740,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr17:14306714..14306740, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:72756032..72756041,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr15:72756032..72756041, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51677141..51677148,-#_a864da2db5f3afbc8f42cb20d942e524 | p7@Rnase12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:75798114..75798125,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:75798114..75798125, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:50280126..50280140,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:50280126..50280140, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr19:24582739..24582748,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr19:24582739..24582748, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:151928014..151928021,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr7:151928014..151928021, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26688157..26688159,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr9:26688157..26688159, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:100634942..100634968,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr5:100634942..100634968, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr16:23308182..23308185,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr16:23308182..23308185, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:106731469..106731481,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr4:106731469..106731481, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:25678985..25679033,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr2:25678985..25679033, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:16664775..16664784,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr12:16664775..16664784, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:69143309..69143319,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr14:69143309..69143319, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:156829476..156829504,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:156829476..156829504, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35651788..35651804,-#_a864da2db5f3afbc8f42cb20d942e524 | p1@9230110F15Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:75798132..75798152,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:75798132..75798152, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101958876..101958883,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr11:101958876..101958883, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:59845404..59845416,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr11:59845404..59845416, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:138824620..138824627,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr4:138824620..138824627, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr16:22504758..22504766,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr16:22504758..22504766, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:70761931..70761971,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr9:70761931..70761971, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379125..21379144,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:21379125..21379144, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152290340..152290344,-#_a864da2db5f3afbc8f42cb20d942e524 | p2@Defb23 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:70779586..70779596,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr9:70779586..70779596, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26610184..26610191,-#_a864da2db5f3afbc8f42cb20d942e524 | p4@Glb1l2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:63630486..63630493,+#_a864da2db5f3afbc8f42cb20d942e524 | p5@Defb43 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26727675..26727681,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr9:26727675..26727681, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:127470322..127470326,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr10:127470322..127470326, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:164434157..164434162,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr2:164434157..164434162, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:52608712..52608739,+#_a864da2db5f3afbc8f42cb20d942e524 | p11@Arhgef40 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:110132148..110132154,+#_a864da2db5f3afbc8f42cb20d942e524 | p3@Wdr25 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:110132148..110132154,+#_a864da2db5f3afbc8f42cb20d942e524 | p3@Wdr25 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:63630486..63630493,+#_a864da2db5f3afbc8f42cb20d942e524 | p5@Defb43 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:124447371..124447383,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr5:124447371..124447383, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:46301295..46301302,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr18:46301295..46301302, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:168436322..168436326,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:168436322..168436326, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:155697874..155697885,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:155697874..155697885, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:53938008..53938022,+#_a864da2db5f3afbc8f42cb20d942e524 | p11@P4ha2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:61976287..61976297,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr10:61976287..61976297, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:107073888..107073914,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr8:107073888..107073914, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378871..21378901,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:21378871..21378901, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:35249011..35249020,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr17:35249011..35249020, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:33600466..33600491,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr4:33600466..33600491, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:43367743..43367754,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:43367743..43367754, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21380670..21380678,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:21380670..21380678, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:116399500..116399516,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr10:116399500..116399516, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25349402..25349409,-#_a864da2db5f3afbc8f42cb20d942e524 | p3@Lcn12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:130496260..130496269,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:130496260..130496269, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:107073888..107073914,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr8:107073888..107073914, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:73221016..73221031,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr17:73221016..73221031, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:73221034..73221051,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr17:73221034..73221051, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:46041606..46041640,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:46041606..46041640, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379972..31379981,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr5:31379972..31379981, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:34813361..34813403,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr9:34813361..34813403, - |
