UBERON:0007811: Difference between revisions
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|located_in= | |located_in= | ||
|name=craniocervical region | |name=craniocervical region | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000153;;UBERON:0013702 | |part_of=UBERON:0000153;;UBERON:0013702 | ||
Latest revision as of 18:03, 12 September 2014
| Name: | craniocervical region | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The anteriormost subdivision of the body that includes the head and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae." [UBERON:cjm] | ||
| Xrefs: |
| ||
| Synonyms: |
"head and neck" EXACT [FMA:280881] "head or neck" RELATED [] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000475(organism subdivision) |
|---|---|
| part_of: | UBERON:0000153(anterior region of body),UBERON:0013702(body proper) |
Children
| derives from: | FF:0102709 (head and neck squamous cell carcinoma cell line sample) |
|---|---|
| part of: | UBERON:0000033 (head),UBERON:0000974 (neck),UBERON:0007914 (head or neck bone),UBERON:0008229 (craniocervical region musculature),UBERON:0010959 (craniocervical muscle) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10030-101E3 (retina, adult, pool1)
- 10047-101G2 (tonsil, adult, pool1)
- 10059-101H5 (tongue, fetal, donor1)
- 10061-101H7 (throat, fetal, donor1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10195-103E6 (olfactory region, adult)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 10203-103F5 (tongue, adult)
- 10209-103G2 (throat, adult)
... further results Mouse (Mus musculus)
- 10030-101E3 (retina, adult, pool1)
- 10047-101G2 (tonsil, adult, pool1)
- 10059-101H5 (tongue, fetal, donor1)
- 10061-101H7 (throat, fetal, donor1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10195-103E6 (olfactory region, adult)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 10203-103F5 (tongue, adult)
- 10209-103G2 (throat, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007811 (craniocervical region), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.07e-42 | FFCP PHASE1:Mm9::chr6:41483113..41483131,+#_7cf1992a8c5e5382e9378911cd28e762 | p4@uc009bpa.1 |
| 1.07e-42 | FFCP PHASE2:Mm9::chr6:41483113..41483131,+#_7cf1992a8c5e5382e9378911cd28e762 | p4@uc009bpa.1 |
| 2.66e-42 | FFCP PHASE2:Mm9::chr6:41483037..41483046,+#_f5590c80be7258bffbcdbe8c6ceb7386 | p8@uc009bpa.1 |
| 2.66e-42 | FFCP PHASE1:Mm9::chr6:41483037..41483046,+#_f5590c80be7258bffbcdbe8c6ceb7386 | p8@uc009bpa.1 |
| 7.88e-41 | FFCP PHASE2:Mm9::chr6:41485075..41485096,+#_0df6bba63a0ecf2739302eaea7b7ccd1 | p1@ENSMUST00000103288, p1@uc009bpl.1 |
| 7.88e-41 | FFCP PHASE1:Mm9::chr6:41485075..41485096,+#_0df6bba63a0ecf2739302eaea7b7ccd1 | p1@ENSMUST00000103288, p1@uc009bpl.1 |
| 3.59e-40 | FFCP PHASE1:Mm9::chr6:41491752..41491776,-#_91d9de81a68e5264cd095e04b6e4a2bd | p@chr6:41491752..41491776, - |
| 3.59e-40 | FFCP PHASE1:Mm9::chr12:108361918..108361930,-#_91d9de81a68e5264cd095e04b6e4a2bd | p@chr12:108361918..108361930, - |
| 3.59e-40 | FFCP PHASE2:Mm9::chr6:41491752..41491776,-#_91d9de81a68e5264cd095e04b6e4a2bd | p@chr6:41491752..41491776, - |
| 3.59e-40 | FFCP PHASE2:Mm9::chr12:108361918..108361930,-#_91d9de81a68e5264cd095e04b6e4a2bd | p@chr12:108361918..108361930, - |
| 9.63e-40 | FFCP PHASE1:Mm9::chr10:20880874..20880893,+#_4788d5b8702745d66efb4a9fb69269bf | p@chr10:20880874..20880893, + |
| 9.63e-40 | FFCP PHASE2:Mm9::chr10:20880874..20880893,+#_4788d5b8702745d66efb4a9fb69269bf | p@chr10:20880874..20880893, + |
| 3.85e-39 | FFCP PHASE1:Mm9::chr6:41483173..41483188,+#_e75d0e8120999b57691467e0818aeb12 | p2@ENSMUST00000103283 |
| 3.85e-39 | FFCP PHASE2:Mm9::chr6:41483173..41483188,+#_e75d0e8120999b57691467e0818aeb12 | p2@ENSMUST00000103283 |
| 4.46e-39 | FFCP PHASE2:Mm9::chr6:41484803..41484826,+#_929b27eae5ed6762c18c3feaedf47da5 | p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1 |
| 4.46e-39 | FFCP PHASE1:Mm9::chr6:41484803..41484826,+#_929b27eae5ed6762c18c3feaedf47da5 | p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1 |
| 2.16e-38 | FFCP PHASE1:Mm9::chr6:41494001..41494028,+#_29affb60429d0d35b5bc8bcd214d2d76 | p@chr6:41494001..41494028, + |
| 2.16e-38 | FFCP PHASE2:Mm9::chr6:41494001..41494028,+#_29affb60429d0d35b5bc8bcd214d2d76 | p@chr6:41494001..41494028, + |
| 2.57e-38 | FFCP PHASE1:Mm9::chr9:44807434..44807445,-#_50ce3e6e55881c8a40d0bb4cc3b04372 | p@chr9:44807434..44807445, - |
| 2.57e-38 | FFCP PHASE2:Mm9::chr9:44807434..44807445,-#_50ce3e6e55881c8a40d0bb4cc3b04372 | p@chr9:44807434..44807445, - |
| 3.48e-38 | FFCP PHASE2:Mm9::chr6:41492605..41492621,+#_313f07b4a6576786353f392a3ffe59be | p@chr6:41492605..41492621, + |
| 3.48e-38 | FFCP PHASE1:Mm9::chr6:41492605..41492621,+#_313f07b4a6576786353f392a3ffe59be | p@chr6:41492605..41492621, + |
| 3.96e-38 | FFCP PHASE1:Mm9::chr2:11093788..11093799,+#_74c5dac6d764df26b7dc4dff6941cfb4 | p11@Prkcq |
| 3.96e-38 | FFCP PHASE2:Mm9::chr2:11093788..11093799,+#_74c5dac6d764df26b7dc4dff6941cfb4 | p11@Prkcq |
| 5.3e-38 | FFCP PHASE1:Mm9::chr9:44809185..44809215,-#_eb33e5b53f53850850d5263eec12d41d | p@chr9:44809185..44809215, - |
| 5.3e-38 | FFCP PHASE2:Mm9::chr9:44809185..44809215,-#_eb33e5b53f53850850d5263eec12d41d | p@chr9:44809185..44809215, - |
| 5.82e-38 | FFCP PHASE1:Mm9::chr14:54791784..54791787,+#_ecd46219db2d8cefd88fed25d5166f7c | p@chr14:54791784..54791787, + |
| 5.82e-38 | FFCP PHASE2:Mm9::chr14:54791784..54791787,+#_ecd46219db2d8cefd88fed25d5166f7c | p@chr14:54791784..54791787, + |
| 8.41e-38 | FFCP PHASE1:Mm9::chr6:40997465..40997489,+#_9f800ff8d2180d6511964bc3f6834330 | p1@ENSMUST00000103263 |
| 8.41e-38 | FFCP PHASE2:Mm9::chr6:40997465..40997489,+#_9f800ff8d2180d6511964bc3f6834330 | p1@ENSMUST00000103263 |
| 1.06e-37 | FFCP PHASE1:Mm9::chr9:44793518..44793537,+#_665e141be5bbc13c792f50d88bae3abb | p@chr9:44793518..44793537, + |
| 1.06e-37 | FFCP PHASE2:Mm9::chr9:44793518..44793537,+#_665e141be5bbc13c792f50d88bae3abb | p@chr9:44793518..44793537, + |
| 1.22e-37 | FFCP PHASE2:Mm9::chr2:156796238..156796256,-#_965015a2018ce4f26eb7f2a35135bc97 | p@chr2:156796238..156796256, - |
| 1.22e-37 | FFCP PHASE1:Mm9::chr2:156796238..156796256,-#_965015a2018ce4f26eb7f2a35135bc97 | p@chr2:156796238..156796256, - |
| 1.26e-37 | FFCP PHASE1:Mm9::chr6:41071548..41071565,+#_534b570d9063714ef2f66c54832fd7e8 | p@chr6:41071548..41071565, + |
| 1.26e-37 | FFCP PHASE2:Mm9::chr6:41071548..41071565,+#_534b570d9063714ef2f66c54832fd7e8 | p@chr6:41071548..41071565, + |
| 1.78e-37 | FFCP PHASE2:Mm9::chr10:28388454..28388458,+#_7111b6426ed772873b43a83e5714e83e | p5@Themis |
| 1.78e-37 | FFCP PHASE1:Mm9::chr10:28388454..28388458,+#_7111b6426ed772873b43a83e5714e83e | p5@Themis |
| 1.96e-37 | FFCP PHASE1:Mm9::chr6:41482920..41482933,+#_7ee97ab1866b799a206f2a3d6562fac3 | p5@uc009bpa.1 |
| 1.96e-37 | FFCP PHASE2:Mm9::chr6:41482920..41482933,+#_7ee97ab1866b799a206f2a3d6562fac3 | p5@uc009bpa.1 |
| 2.79e-37 | FFCP PHASE1:Mm9::chr6:40997323..40997349,+#_a64e8258194718ef2321cef2f84fd58c | p2@uc009bnp.1, p2@uc012eki.1 |
| 2.79e-37 | FFCP PHASE2:Mm9::chr6:40997323..40997349,+#_a64e8258194718ef2321cef2f84fd58c | p2@uc009bnp.1, p2@uc012eki.1 |
| 1.41e-36 | FFCP PHASE1:Mm9::chr11:52095797..52095809,-#_3d0ef7d06c9e517d121520330a2cecaf | p5@Tcf7 |
| 1.41e-36 | FFCP PHASE2:Mm9::chr11:52095797..52095809,-#_3d0ef7d06c9e517d121520330a2cecaf | p5@Tcf7 |
| 1.71e-36 | FFCP PHASE2:Mm9::chr6:124838183..124838199,-#_988d951d388a3f80ea3d83da058ff52d | p2@Cd4 |
| 1.71e-36 | FFCP PHASE1:Mm9::chr6:124838183..124838199,-#_988d951d388a3f80ea3d83da058ff52d | p2@Cd4 |
| 3.36e-36 | FFCP PHASE1:Mm9::chr14:61328148..61328173,+#_eefb7698cb0819ff71993f3887c67ec8 | p@chr14:61328148..61328173, + |
| 3.36e-36 | FFCP PHASE2:Mm9::chr14:61328148..61328173,+#_eefb7698cb0819ff71993f3887c67ec8 | p@chr14:61328148..61328173, + |
| 5.16e-36 | FFCP PHASE2:Mm9::chr6:41128981..41128995,+#_17bcced7dbd4007d0e774b40461f9f1b | p1@uc012ekr.1 |
| 5.16e-36 | FFCP PHASE1:Mm9::chr6:41128981..41128995,+#_17bcced7dbd4007d0e774b40461f9f1b | p1@uc012ekr.1 |
| 6.0e-36 | FFCP PHASE1:Mm9::chr6:40841675..40841691,+#_a29b55ac17a87fc95f8fc5f1937a264d | p2@1810009J06Rik |
| 6.0e-36 | FFCP PHASE2:Mm9::chr6:40841675..40841691,+#_a29b55ac17a87fc95f8fc5f1937a264d | p2@1810009J06Rik |
| 7.07e-36 | FFCP PHASE1:Mm9::chr6:41483016..41483036,+#_d22dc9da2af1408c95be4420957abcf8 | p2@uc009bpa.1 |
| 7.07e-36 | FFCP PHASE2:Mm9::chr6:41483016..41483036,+#_d22dc9da2af1408c95be4420957abcf8 | p2@uc009bpa.1 |
| 7.69e-36 | FFCP PHASE1:Mm9::chr6:41066036..41066054,+#_fa5cc58a07375da4cb011201f2b2e752 | p1@uc012ekk.1 |
| 7.69e-36 | FFCP PHASE2:Mm9::chr6:41066036..41066054,+#_fa5cc58a07375da4cb011201f2b2e752 | p1@uc012ekk.1 |
| 7.74e-36 | FFCP PHASE1:Mm9::chrX:39855684..39855699,+#_376ee4c715fb6ef0f9d560fc546f211b | p2@Sh2d1a |
| 7.74e-36 | FFCP PHASE2:Mm9::chrX:39855684..39855699,+#_376ee4c715fb6ef0f9d560fc546f211b | p2@Sh2d1a |
| 8.5e-36 | FFCP PHASE2:Mm9::chr6:41009432..41009454,+#_f5f553b7c2508a3992a74a222e9e7b83 | p1@ENSMUST00000103265 |
| 8.5e-36 | FFCP PHASE2:Mm9::chr6:41491943..41491953,+#_f5f553b7c2508a3992a74a222e9e7b83 | p3@uc009bpo.1, p3@uc009bpp.1 |
| 8.5e-36 | FFCP PHASE1:Mm9::chr6:41491943..41491953,+#_f5f553b7c2508a3992a74a222e9e7b83 | p3@uc009bpo.1, p3@uc009bpp.1 |
| 8.5e-36 | FFCP PHASE1:Mm9::chr6:41009432..41009454,+#_f5f553b7c2508a3992a74a222e9e7b83 | p1@ENSMUST00000103265 |
| 9.52e-36 | FFCP PHASE1:Hg19::chr14:37126765..37126799,+#_c4cc76559f47ea513d1f07efc89f0b71 | p2@PAX9 |
| 9.52e-36 | FFCP PHASE2:Hg19::chr14:37126765..37126799,+#_c4cc76559f47ea513d1f07efc89f0b71 | p2@PAX9 |
| 1.02e-35 | FFCP PHASE2:Mm9::chr7:133512043..133512060,-#_a83a89952491ed465579c1b8b5fd126f | p@chr7:133512043..133512060, - |
| 1.02e-35 | FFCP PHASE1:Mm9::chr7:133512043..133512060,-#_a83a89952491ed465579c1b8b5fd126f | p@chr7:133512043..133512060, - |
| 1.55e-35 | FFCP PHASE1:Mm9::chr16:48772258..48772270,-#_428436ea08a1424ad3181a2e5f7f1cfb | p5@Trat1 |
| 1.55e-35 | FFCP PHASE2:Mm9::chr16:48772258..48772270,-#_428436ea08a1424ad3181a2e5f7f1cfb | p5@Trat1 |
| 1.62e-35 | FFCP PHASE1:Mm9::chr6:41128837..41128859,+#_7d9d02590c15b067d6da235fec4084d4 | p2@Gm5409 |
| 1.62e-35 | FFCP PHASE2:Mm9::chr6:41128837..41128859,+#_7d9d02590c15b067d6da235fec4084d4 | p2@Gm5409 |
| 2.15e-35 | FFCP PHASE1:Mm9::chr14:54794540..54794554,+#_2fab97ec9cb4a3a3633dcab718081b9d | p@chr14:54794540..54794554, + |
| 2.15e-35 | FFCP PHASE2:Mm9::chr14:54794540..54794554,+#_2fab97ec9cb4a3a3633dcab718081b9d | p@chr14:54794540..54794554, + |
| 2.27e-35 | FFCP PHASE2:Mm9::chr14:54496363..54496388,+#_615854df2966c9d9edc62dac547816e6 | p@chr14:54496363..54496388, + |
| 2.27e-35 | FFCP PHASE1:Mm9::chr14:54496363..54496388,+#_615854df2966c9d9edc62dac547816e6 | p@chr14:54496363..54496388, + |
| 2.27e-35 | FFCP PHASE1:Mm9::chr6:41491801..41491815,-#_615854df2966c9d9edc62dac547816e6 | p@chr6:41491801..41491815, - |
| 2.27e-35 | FFCP PHASE2:Mm9::chr6:41491801..41491815,-#_615854df2966c9d9edc62dac547816e6 | p@chr6:41491801..41491815, - |
| 2.29e-35 | FFCP PHASE1:Mm9::chr6:41489240..41489252,+#_c3a63a2cd0afd842b2d848f3e59b16b4 | p@chr6:41489240..41489252, + |
| 2.29e-35 | FFCP PHASE2:Mm9::chr6:41489240..41489252,+#_c3a63a2cd0afd842b2d848f3e59b16b4 | p@chr6:41489240..41489252, + |
| 2.52e-35 | FFCP PHASE1:Mm9::chr11:87627824..87627837,-#_22371bce152d78ca1488e28fd0c59462 | p@chr11:87627824..87627837, - |
| 2.52e-35 | FFCP PHASE1:Mm9::chr6:41483146..41483158,+#_22371bce152d78ca1488e28fd0c59462 | p6@uc009bpa.1 |
| 2.52e-35 | FFCP PHASE1:Mm9::chr7:133512935..133512936,-#_22371bce152d78ca1488e28fd0c59462 | p8@Lat |
| 2.52e-35 | FFCP PHASE2:Mm9::chr11:87627824..87627837,-#_22371bce152d78ca1488e28fd0c59462 | p@chr11:87627824..87627837, - |
| 2.52e-35 | FFCP PHASE2:Mm9::chr6:41483146..41483158,+#_22371bce152d78ca1488e28fd0c59462 | p6@uc009bpa.1 |
| 2.52e-35 | FFCP PHASE2:Mm9::chr7:133512935..133512936,-#_22371bce152d78ca1488e28fd0c59462 | p8@Lat |
| 2.52e-35 | FFCP PHASE1:Mm9::chr4:125978325..125978339,-#_22371bce152d78ca1488e28fd0c59462 | p@chr4:125978325..125978339, - |
| 2.52e-35 | FFCP PHASE2:Mm9::chr4:125978325..125978339,-#_22371bce152d78ca1488e28fd0c59462 | p@chr4:125978325..125978339, - |
| 2.6e-35 | FFCP PHASE1:Mm9::chr6:41231266..41231303,+#_07234f6c75f27409e5d6da29113e4739 | p1@ENSMUST00000103282 |
| 2.6e-35 | FFCP PHASE2:Mm9::chr6:41231266..41231303,+#_07234f6c75f27409e5d6da29113e4739 | p1@ENSMUST00000103282 |
| 2.6e-35 | FFCP PHASE1:Mm9::chr6:41494376..41494389,-#_07234f6c75f27409e5d6da29113e4739 | p@chr6:41494376..41494389, - |
| 2.6e-35 | FFCP PHASE2:Mm9::chr6:41494376..41494389,-#_07234f6c75f27409e5d6da29113e4739 | p@chr6:41494376..41494389, - |
| 2.68e-35 | FFCP PHASE2:Mm9::chr7:133512914..133512925,-#_8d476722e7dba928fd8f480a5566d456 | p7@Lat |
| 2.68e-35 | FFCP PHASE1:Mm9::chr7:133512914..133512925,-#_8d476722e7dba928fd8f480a5566d456 | p7@Lat |
| 2.68e-35 | FFCP PHASE1:Mm9::chr12:114663631..114663645,-#_8d476722e7dba928fd8f480a5566d456 | p@chr12:114663631..114663645, - |
| 2.68e-35 | FFCP PHASE2:Mm9::chr12:114663631..114663645,-#_8d476722e7dba928fd8f480a5566d456 | p@chr12:114663631..114663645, - |
| 2.83e-35 | FFCP PHASE2:Mm9::chr6:41138311..41138333,+#_f1b0466f621de234629a02f6d59b46ec | p@chr6:41138311..41138333, + |
| 2.83e-35 | FFCP PHASE1:Mm9::chr6:41138311..41138333,+#_f1b0466f621de234629a02f6d59b46ec | p@chr6:41138311..41138333, + |
| 3.33e-35 | FFCP PHASE2:Mm9::chr6:40996879..40996890,+#_bd687d4aecc56ccee0d39760c692b88a | p5@uc009bnp.1, p5@uc012eki.1 |
| 3.33e-35 | FFCP PHASE1:Mm9::chr6:40996879..40996890,+#_bd687d4aecc56ccee0d39760c692b88a | p5@uc009bnp.1, p5@uc012eki.1 |
| 3.55e-35 | FFCP PHASE1:Mm9::chr11:53448200..53448205,-#_5c2c14f4c0e4ac704688e6c75a2ba699 | p1@Il13 |
| 3.55e-35 | FFCP PHASE2:Mm9::chr11:53448200..53448205,-#_5c2c14f4c0e4ac704688e6c75a2ba699 | p1@Il13 |
