FFCP PHASE1:Mm9::chr16:38550224..38550250,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:38550224..38550250,-
|short_description=p2@Poglut1
|description=CAGE_peak_2_at_Poglut1_5end
|association_with_transcript=15bp_to_NM_172380,uc007zfc.1,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=224143 | |EntrezGene=224143 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=399 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BYB9,Q8BLG5 | |UniProt=Q8BYB9,Q8BLG5 | ||
|association_with_transcript=15bp_to_NM_172380,uc007zfc.1,uc007zfd.1_5end | |||
|cluster_id=chr16:38550224..38550250,- | |||
|description=CAGE_peak_2_at_Poglut1_5end | |||
|id=chr16:38550224..38550250,- | |||
|ontology_enrichment_celltype=CL:0000540!5.89e-14!33;CL:0000047!5.89e-14!33;CL:0000031!5.89e-14!33;CL:0000404!5.89e-14!33;CL:0000393!4.19e-13!39;CL:0000211!4.19e-13!39;CL:0002319!1.13e-10!43;CL:0000221!1.29e-10!44;CL:0000133!1.29e-10!44;CL:0000117!3.47e-10!23;CL:0000337!3.47e-10!23;CL:0000055!3.77e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.16e-15,33;CL:0000047,2.16e-15,33;CL:0000031,2.16e-15,33;CL:0000404,2.16e-15,33;CL:0000393,2.02e-14,39;CL:0000211,2.02e-14,39;CL:0000117,3.48e-11,23;CL:0000337,3.48e-11,23;CL:0002319,6.73e-11,43;CL:0000221,7.63e-11,44;CL:0000133,7.63e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.89e-27!73;UBERON:0005743!8.89e-27!73;UBERON:0000073!2.19e-26!75;UBERON:0001016!2.19e-26!75;UBERON:0002346!1.49e-22!71;UBERON:0003075!1.49e-22!71;UBERON:0007284!1.49e-22!71;UBERON:0004121!2.05e-22!102;UBERON:0000924!2.05e-22!102;UBERON:0006601!2.05e-22!102;UBERON:0000153!1.96e-21!94;UBERON:0001049!3.87e-21!52;UBERON:0005068!3.87e-21!52;UBERON:0006241!3.87e-21!52;UBERON:0007135!3.87e-21!52;UBERON:0000033!8.64e-21!63;UBERON:0000955!3.33e-20!50;UBERON:0006238!3.33e-20!50;UBERON:0002616!1.56e-19!49;UBERON:0007811!4.10e-18!86;UBERON:0003056!1.01e-17!49;UBERON:0003080!4.91e-16!40;UBERON:0002780!2.36e-15!39;UBERON:0001890!2.36e-15!39;UBERON:0006240!2.36e-15!39;UBERON:0002020!1.19e-14!34;UBERON:0002791!2.84e-12!29;UBERON:0003528!2.84e-12!29;UBERON:0001893!2.84e-12!29;UBERON:0000956!1.44e-08!21;UBERON:0001869!1.44e-08!21;UBERON:0000203!1.44e-08!21;UBERON:0002619!3.36e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.93e-29,73;UBERON:0001016,3.57e-28,75;UBERON:0002346,3.43e-26,64;UBERON:0003075,3.43e-26,64;UBERON:0007284,3.43e-26,64;UBERON:0000073,1.01e-23,54;UBERON:0004121,1.27e-23,95;UBERON:0000924,1.27e-23,95;UBERON:0006601,1.27e-23,95;UBERON:0001049,1.28e-22,52;UBERON:0005068,1.28e-22,52;UBERON:0006241,1.28e-22,52;UBERON:0007135,1.28e-22,52;UBERON:0010371,1.14e-20,73;UBERON:0000955,9.20e-20,47;UBERON:0006238,9.20e-20,47;UBERON:0002616,4.89e-19,46;UBERON:0003056,1.71e-18,49;UBERON:0003080,5.94e-17,40;UBERON:0002780,3.35e-16,39;UBERON:0001890,3.35e-16,39;UBERON:0006240,3.35e-16,39;UBERON:0002020,2.17e-15,34;UBERON:0010314,2.86e-14,92;UBERON:0003528,9.30e-13,29;UBERON:0002791,9.30e-13,29;UBERON:0001893,9.30e-13,29;UBERON:0000956,1.14e-08,21;UBERON:0001869,1.14e-08,21;UBERON:0000203,1.14e-08,21;UBERON:0002619,3.73e-07,17 | |||
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| ||
|short_description=p2@Poglut1 | |||
}} | }} |
Latest revision as of 00:00, 2 October 2015
Short description: | p2@Poglut1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Poglut1_5end |
Coexpression cluster: | MCL_coexpression_mm9:399 |
Association with transcript: | 15bp_to_NM_172380, uc007zfc.1, uc007zfd.1_5end |
EntrezGene: | Poglut1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.16e-15 | 33 |
neuronal stem cell | 2.16e-15 | 33 |
neuroblast | 2.16e-15 | 33 |
electrically signaling cell | 2.16e-15 | 33 |
electrically responsive cell | 2.02e-14 | 39 |
electrically active cell | 2.02e-14 | 39 |
CNS neuron (sensu Vertebrata) | 3.48e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.48e-11 | 23 |
neural cell | 6.73e-11 | 43 |
ectodermal cell | 7.63e-11 | 44 |
neurectodermal cell | 7.63e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.93e-29 | 73 |
nervous system | 3.57e-28 | 75 |
neurectoderm | 3.43e-26 | 64 |
neural plate | 3.43e-26 | 64 |
presumptive neural plate | 3.43e-26 | 64 |
regional part of nervous system | 1.01e-23 | 54 |
ectoderm-derived structure | 1.27e-23 | 95 |
ectoderm | 1.27e-23 | 95 |
presumptive ectoderm | 1.27e-23 | 95 |
neural tube | 1.28e-22 | 52 |
neural rod | 1.28e-22 | 52 |
future spinal cord | 1.28e-22 | 52 |
neural keel | 1.28e-22 | 52 |
ecto-epithelium | 1.14e-20 | 73 |
brain | 9.20e-20 | 47 |
future brain | 9.20e-20 | 47 |
regional part of brain | 4.89e-19 | 46 |
pre-chordal neural plate | 1.71e-18 | 49 |
anterior neural tube | 5.94e-17 | 40 |
regional part of forebrain | 3.35e-16 | 39 |
forebrain | 3.35e-16 | 39 |
future forebrain | 3.35e-16 | 39 |
gray matter | 2.17e-15 | 34 |
structure with developmental contribution from neural crest | 2.86e-14 | 92 |
brain grey matter | 9.30e-13 | 29 |
regional part of telencephalon | 9.30e-13 | 29 |
telencephalon | 9.30e-13 | 29 |
cerebral cortex | 1.14e-08 | 21 |
cerebral hemisphere | 1.14e-08 | 21 |
pallium | 1.14e-08 | 21 |
regional part of cerebral cortex | 3.73e-07 | 17 |