FFCP PHASE1:Mm9::chr19:10176299..10176310,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:10176299..10176310,-
|short_description=p4@Fads2
|description=CAGE_peak_4_at_Fads2_5end
|association_with_transcript=-306bp_to_ENSMUST00000025567,NM_01969...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56473 | |EntrezGene=56473 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9Z0R9 | |UniProt=Q9Z0R9 | ||
|association_with_transcript=-306bp_to_ENSMUST00000025567,NM_019699,uc008gpb.1,uc008gpc.1_5end | |||
|cluster_id=chr19:10176299..10176310,- | |||
|description=CAGE_peak_4_at_Fads2_5end | |||
|id=chr19:10176299..10176310,- | |||
|ontology_enrichment_celltype=CL:0002319!2.82e-09!43;CL:0000221!3.29e-09!44;CL:0000133!3.29e-09!44;CL:0000117!3.53e-07!23;CL:0000337!3.53e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.61e-08,43;CL:0000221,4.29e-08,44;CL:0000133,4.29e-08,44;CL:0000117,2.71e-07,23;CL:0000337,2.71e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.73e-09!71;UBERON:0003075!8.73e-09!71;UBERON:0007284!8.73e-09!71;UBERON:0004121!1.93e-08!102;UBERON:0000924!1.93e-08!102;UBERON:0006601!1.93e-08!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.74e-07,49 | |||
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|phase1_expression=1.28119077683835,0.697950815278722,0,0,0.500895729946347,0.503637815735669,1.40167584357315,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.340173160604279,0.397163804803541,0.522399578277871,1.11994695955385,0,0.57423196411502,0,1.29282739611533,0.950117097281869,0.252030129759931,1.10865255327652,2.54012269383853,4.30545351309199,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0.202753862439029,0.550640256485045,1.56478268869608,3.92445281484804,3.07560655828261,2.52758868796568,1.1198913730029,2.87505128729943,0,0,0,1.28629718017973,0.573066879877513,0,4.85559506063035,1.5869729378161,1.90149421051854,1.35537812827653,0.889294796111139,0,0,0,1.79760066311043,3.45796474789399,3.83651565541367,2.02508907497536,3.99617426567626,2.57085885963423,3.75476519617743,2.32732518508413,6.03826467414889,2.75765635983006,0,0.766124028511126,0.921639199537461,5.14356522147756,7.22752384459036,5.2091337055676,1.11673199600552,0.56276261003168,0.916789486660861,0.589257170947335,1.13897344639282,2.42319279572891,0.227178579999552,1.5870027622425,0.289864488701678,0,0,1.61910957491345,0,2.24013443548668,0.702222100658759,1.36344258062446,1.29893002301434,2.47337702157238,0.845060518660083,2.56652954828636,7.64415719119937,0,0.432982082022428,0.506719730950197,1.51657333504435,1.48439043634778,0,1.33597925158342,2.08182392119363,3.34912026143355,2.7673859670727,3.46662073271032,2.4693628498498,3.51866455723091,0.247194967734374,0,0,0.323533699894818,0,0.969750506270444,1.86391761218122,0.878342391034642,0.209446706813455,0.255457055208591,0.11981512450592,0,0,0.748953197024114,0.457500602818626,3.26701315493447,1.21677024134594,0.767146371990992,1.24672826735736,0.324482526135515,0.509196819251581,0.373220911830279,0.505445516867349,0,2.21204753036596,2.98872735763515,1.98068342785884,2.10986744970001,2.4493139694478,1.7935920839879,2.52994656311268,0.776110112217047,2.37124792226126,1.13463648100692,1.23165786914764,0.876782929710299,0.834141747676794,0.348252166522167,0.411564272815887,1.39323986772945,0,0.257347907114715,0,1.65700618028402,1.17263029990548,0.36012412292203,0.473489471170421,0.393528463494808,0.308534225774757,0.465067889500816,0.536546802799238,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,1.05144974282064,2.6755199218614,0,1.58670339998127,2.13288250535234,0.696710015581316,0.644337306610467,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.795825888164603,0.58489226135736,0.898819408654221,0,0.597423819763102,1.13800740571849,1.5994791765362,1.1270773567308,0.610953983535943,0.581857461502877,0.140271639780637,0.252946148497029,0.295220295959204,0.156998727841375,0,1.1858105083486,1.33476084572875,1.37591296579242,2.9232074610031,0.405720242777006,0.964708639009667,0,0.575392274901621,0.324270453550071,1.92192989231657,7.18841032636773,0.744281895337007,2.49630138491648,2.02063102357689,1.79397413521912,1.4473305640901,0.184753190166605,0.568474235311454,0.325929952884052,1.01847051465113,1.17345124144251,1.17254380209271,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.491589944147214,0.863424909329478,0,0,0.54390568381871,2.95058563811422,0.551873492609465,0.481651769963376,0.586058432961016,2.13115428989678,0.252470927204373,0.94652465824877,0.390438744296638,0.861693590931196,0.955875191810208,1.11399337041197,2.26461224631066,0.404810701674894,0.584511715822624,0.395287777946524,0.642642632843614,0.283880170416537,0.178065603667255,0,0.659880491890142,1.32745138339963,1.69946445308487,0.906970670894253,0.943025398779491,1.47650946440386,1.22974059177571,0.258428293168221,0.727067458955011,1.06949213515416,0,1.05418608574999,1.03135543248187,1.02131881726136,2.16073312837572,1.55230420539305,1.71469628025274,1.24138163549592,0.713475270408282,1.81003922662333,0.608929898229199,0,0.21183207086382,0.220528398054962,0.49465875882444,0,0.422190474497091,0.238744688006273,0.328281799490123,0.291480836629851,0.370850604021019,0.512612642393558,0.619160603889667,0.740778109478847,0.565105371014073,1.36694227721025,0.457556346413045,0.339956859987711,0.419854356970974,0.276399947608848,0,0.949007980743406,1.01659733563424,1.62008011232702,0.418176592028937,1.31017538247707,0.539457385539283,1.23980183588004,1.04702376793612,0.648074866458964,0,0.56369293868419,1.19613236835183,1.48912641411388,1.16670713006429,1.54991788173277,1.18269287843545,0.938857909166032,1.5624526181274,1.36317147753424,0.724752362478018,0.288030006257865,1.26404448251271,1.82452693761148,1.84879722896689,1.68897069871134,2.32734704367726,1.19208812868759,0.600977247599844,0.590758108698309,1.11063094942962,1.295515713135,1.31074040677893,0.974578807397524,0.769694733122636,0.701261413089414,0.226730383615211,0,0.897138566094757,0.671538465456314,0.965947970160952,0.750729901804728,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,1.03552062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| ||
|short_description=p4@Fads2 | |||
}} | }} |
Latest revision as of 20:22, 1 October 2015
Short description: | p4@Fads2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Fads2_5end |
Coexpression cluster: | NA |
Association with transcript: | -306bp_to_ENSMUST00000025567, NM_019699, uc008gpb.1, uc008gpc.1_5end |
EntrezGene: | Fads2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.61e-08 | 43 |
ectodermal cell | 4.29e-08 | 44 |
neurectodermal cell | 4.29e-08 | 44 |
CNS neuron (sensu Vertebrata) | 2.71e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.71e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 5.74e-07 | 49 |