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FFCP PHASE1:Mm9::chr19:23833309..23833397,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:23833309..23833397,+
|DHSsupport=NA
|short_description=p1@Apba1
|DPIdataset=NA
|description=CAGE_peak_1_at_Apba1_5end
|association_with_transcript=0bp_to_ENSMUST00000025830,NM_177034,uc008hai.1,uc012bjp.1_5end
|EntrezGene=319924
|EntrezGene=319924
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q3UH49,Q8BMF2,Q3UH26
|UniProt=Q3UH49,Q8BMF2,Q3UH26
|association_with_transcript=0bp_to_ENSMUST00000025830,NM_177034,uc008hai.1,uc012bjp.1_5end
|cluster_id=chr19:23833309..23833397,+
|description=CAGE_peak_1_at_Apba1_5end
|id=chr19:23833309..23833397,+
|ontology_enrichment_celltype=CL:0000117!1.08e-13!23;CL:0000337!1.08e-13!23;CL:0000540!1.64e-09!33;CL:0000047!1.64e-09!33;CL:0000031!1.64e-09!33;CL:0000404!1.64e-09!33;CL:0000393!5.45e-09!39;CL:0000211!5.45e-09!39;CL:0000221!9.75e-08!44;CL:0000133!9.75e-08!44;CL:0002319!1.45e-07!43;CL:0000055!5.71e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,6.82e-14,23;CL:0000337,6.82e-14,23;CL:0000540,1.31e-09,33;CL:0000047,1.31e-09,33;CL:0000031,1.31e-09,33;CL:0000404,1.31e-09,33;CL:0000393,4.41e-09,39;CL:0000211,4.41e-09,39;CL:0000221,2.05e-07,44;CL:0000133,2.05e-07,44;CL:0002319,3.06e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.09e-19,54;UBERON:0001017,1.75e-18,73;UBERON:0001016,1.87e-18,75;UBERON:0001049,6.69e-18,52;UBERON:0005068,6.69e-18,52;UBERON:0006241,6.69e-18,52;UBERON:0007135,6.69e-18,52;UBERON:0004121,8.32e-17,95;UBERON:0000924,8.32e-17,95;UBERON:0006601,8.32e-17,95;UBERON:0002346,8.33e-17,64;UBERON:0003075,8.33e-17,64;UBERON:0007284,8.33e-17,64;UBERON:0002020,1.14e-16,34;UBERON:0010371,2.11e-15,73;UBERON:0010314,1.59e-14,92;UBERON:0000955,1.60e-14,47;UBERON:0006238,1.60e-14,47;UBERON:0002616,4.90e-14,46;UBERON:0003528,3.23e-13,29;UBERON:0002791,3.23e-13,29;UBERON:0001893,3.23e-13,29;UBERON:0003056,6.05e-13,49;UBERON:0003080,1.08e-12,40;UBERON:0002780,3.85e-12,39;UBERON:0001890,3.85e-12,39;UBERON:0006240,3.85e-12,39;UBERON:0000956,9.14e-09,21;UBERON:0001869,9.14e-09,21;UBERON:0000203,9.14e-09,21;UBERON:0002021,1.80e-07,10;UBERON:0000411,1.80e-07,10;UBERON:0001950,1.80e-07,10;UBERON:0002619,2.91e-07,17
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|phase1_expression=2.40223270657191,0,0,0,0.500895729946347,0.33575854382378,0.934450562382103,0,0,0,0,0,0.171200729931206,0,1.33243904726265,1.82227740650843,0.699561878128147,1.73504190947031,2.05671650408608,1.69755860719212,11.4808441703944,0,0,0,0.22940928106717,0,0,0.646413698057667,0.950117097281869,0.252030129759931,0.221730510655305,0,0,0,0,0,0,1.25559489221072,2.3440060335714,6.80580867165938,0,0,0.971020706062307,1.6366586336825,1.52065396829272,2.38610777810186,3.9119567217402,0.872100625521786,1.09843091367236,0.972149495371417,0.839918529752175,2.87505128729943,0.335565212115473,0,0,4.88792928468299,6.87680255853016,4.64104883049698,27.5150386769053,33.8554226734101,36.7622214033584,1.69422266034566,1.77858959222228,2.2497492932035,2.96659908770092,3.5524005747305,4.79360176829448,5.76327457982332,8.91730665852908,6.75029691658453,7.99234853135252,67.4136323192976,65.3770881216776,9.79926393719632,10.6388472830242,6.43453150627015,52.8556228797066,64.7374804091902,64.0539243678535,28.8830970129125,32.386625835253,19.7947080811569,59.4659787872941,46.1465340225978,64.7864570573675,71.0054890991539,63.0706545940026,38.7710847316625,3.40767869999328,3.70300644523249,3.47837386442013,0.860423876981386,0,0,0,0,1.96622188184453,2.89731548382698,2.59786004602869,2.12003744706204,5.21120653173718,11.5493829672886,15.2883143823987,14.2213340630666,0,0,0,2.05530983494308,0.517875767294343,2.67195850316685,3.64319186208885,3.34912026143355,2.53677046981664,4.6724018571313,3.99801604261396,1.63366568728578,0.988779870937496,3.90418263683761,3.5384422077995,3.88240439873782,3.5334642953663,1.93950101254089,0,32.2058876712702,45.2404886717063,1.27728527604296,3.35482348616577,2.39961092397363,3.04968544975355,35.7999628177526,22.4175295381127,19.8533876338326,29.7239587528793,32.2201476236216,39.2719404217569,32.2860113504838,4.68461073711455,3.23458123586242,0.758168275301024,2.52530227063769,0.780722657776222,3.44853156650209,2.16074555766419,4.9732589885786,7.89223390155403,6.79002717509704,9.46387418053261,11.6416516832557,0,0.567318240503458,0.351902248327898,1.09597866213787,1.94633074457919,4.87553033131033,3.70407845534298,0.796137067273973,8.42655824775882,7.72043721344146,6.25159698670304,0.828503090142008,1.64168241986767,2.52086886045421,0.710234206755631,1.57411385397923,2.77680803197281,0.232533944750408,1.87791380979733,3.26942958628075,4.44311594766397,4.10418660197738,4.53985333456792,4.5321996101853,3.73235195994786,4.02619256281115,22.0804445992334,19.2431625149262,1.32167513193519,0.264450566663544,0.213288250535234,2.09013004674395,2.06187938115349,2.21851877085677,1.33426826306922,2.28270751335071,1.89811624617805,1.81168850196412,3.2673577144035,3.58121649674071,3.50935356814416,3.59527763461689,1.72910439899755,2.38969527905241,0.569003702859245,2.62771579002376,1.1270773567308,4.2766778847516,5.62462212786115,6.94344616914154,3.98390183882821,2.36176236767363,2.35498091762062,1.72756029490521,1.48226313543574,0,0,0.224862112384854,0.202860121388503,0.72353147925725,0.25462585178142,0.287696137450811,1.29708181420028,0.823684239564244,0,1.11642284300551,0.936113019343682,0.252578877947112,0.179397413521912,0.482443521363367,2.95605104266567,1.51593129416388,0.814824882210129,1.18821560042632,0.938760993154008,2.01007508930179,1.6663054862021,4.09780660501378,2.52216230569906,3.32197034473162,6.05928120898451,4.42430949732493,3.9717545829156,3.7608755231193,3.01582567878545,4.35124547054968,0.983528546038072,1.65562047782839,32.2706685875462,37.6249513960972,1.14754461763673,1.51482556322624,1.57754109708128,0.390438744296638,3.66219776145758,1.67278158566786,1.55959071857676,1.98153571552183,4.85772842009873,3.50707029493574,2.76701444562566,19.2792789853084,2.83880170416537,2.84904965867608,5.70104357737516,10.3931177472697,6.63725691699814,0.728341908464944,0.604647113929502,1.13163047853539,1.47650946440386,1.84461088766356,3.87642439752332,1.81766864738753,4.27796854061666,3.79244109522979,5.27093042874994,4.12542172992747,8.5109901438447,1.8006109403131,1.03486947026204,0.857348140126369,1.24138163549592,4.8159580752559,6.58196082408484,3.95804433848979,2.3467170806371,3.81297727554876,1.54369878638473,3.62749756471256,3.55221738730992,4.1012788951146,2.26807453605959,2.79039529566604,2.62332752966866,31.1514507377656,1.70870880797853,1.857481811669,1.29636169158798,0.753473828018764,0.956859594047176,1.60144721244566,0,0.559805809294632,0.276399947608848,0,0.316335993581135,1.82987520414164,1.72808545314882,2.09088296014469,2.62035076495413,2.29269388854195,3.96736587481612,2.09404753587224,2.07383957266869,0.621339313086926,1.12738587736838,0.747582730219894,1.15820943319968,2.52786544847262,2.58319646955462,1.85851738039856,2.58185925020659,2.99470085141085,1.25831213310853,2.89900944991207,2.30424005006292,1.26404448251271,1.21635129174099,1.74608627180206,1.29920822977795,1.43221356533985,0.39736270956253,0.961563596159751,0.886137163047463,0.706765149637033,0.990688486514998,0.604957110821043,0.779663045918019,1.34696578296461,1.05189211963412,3.40095575422817,0.443971906748129,0.358855426437903,0.335769232728157,4.056981474676,5.2551093126331,6.22715522508701,3.42989406526505,4.51414893631827,58.1694397895579,52.9374021983253,59.5811333976973,39.6980851213918,36.9944560676147,46.0790277407717,33.0761025113585,39.1779446805072,31.2668262199101,36.2432218226274,1.86817225651518,3.99024873401031,3.75613932659095,4.86213434136588,5.44994222832754,7.35374033800057,6.00066165064361,6.38708677440572,6.4183841918363,4.80124702351215,6.84394109703647,6.41329560712659,5.52484894072306,7.55496798377458,7.98353018483024,7.62069906052918,9.15486174964358,8.10218725947561,9.89006161927936,6.62395140604788,5.48590803816665,6.21165321557681,8.58370283810355,6.97662799835177,8.37573485696442,7.02301245500915,6.76833499629258,5.5244639401947,6.79020569229309,5.61142271657738,7.23673610557462,6.2057823896605,6.95692773388472,7.2820315357404,5.98010494041538,11.4912865851455,4.91256377735358,6.66100267549725,4.97349663378993,6.17655973534643,4.40548887678801
|short_description=p1@Apba1
}}
}}

Latest revision as of 00:06, 2 October 2015

Short description:p1@Apba1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Apba1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000025830, NM_177034, uc008hai.1, uc012bjp.1_5end
EntrezGene:Apba1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Apba1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C327.52
Mouse Granule cells, donor2.CNhs12357.11731-123E333.86
Mouse Granule cells, donor3.CNhs12108.11636-122C736.76
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.92
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F167.41
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D565.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D352.86
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F364.74
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D764.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D428.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F432.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.79
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E459.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E546.15
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I664.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D671.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F663.07
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E138.77
Mouse Schwann, donor1.CNhs12507.11728-123D93.41
Mouse Schwann, donor2.CNhs12573.11746-123F93.70
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F54.67
adrenal gland, neonate N00.CNhs11191.1311-23C14.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H13.90
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B232.21
cerebellum, neonate N30.CNhs11135.1395-42I245.24
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A435.80
corpus striatum, adult.CNhs10487.19-21D822.42
corpus striatum, neonate N00.CNhs11226.630-43F119.85
cortex, adult.CNhs10473.12-14D529.72
cortex, neonate N30.CNhs11107.1392-42F232.22
diencephalon, adult.CNhs10482.20-12F239.27
diencephalon, neonate N30.CNhs11201.1388-42B232.29
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D44.97
eyeball, neonate N00.CNhs11207.633-15C67.89
eyeball, neonate N01.CNhs11140.1532-43E76.79
eyeball, neonate N02.CNhs11205.1551-44G89.46
eyeball, neonate N16.CNhs11188.777-19A211.64
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.72
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E33.27
heart, neonate N03.CNhs11221.1349-25I24.44
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G14.54
heart, neonate N20.CNhs11127.821-26I64.53
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E822.08
hippocampus, neonate N00.CNhs11228.627-43G119.24
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G76.94
kidney, neonate N10.CNhs11206.758-6D53.98
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E66.06
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C232.27
medulla oblongata, neonate N30.CNhs11200.1396-42A337.62
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I919.28
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I45.70
oviduct, adult pregnant day01.CNhs10500.988-6G610.39
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F56.58
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H34.10
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C931.15
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A93.97
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E44.06
uterus, adult pregnant day19.CNhs10497.590-15F55.26
uterus, adult.CNhs10509.92-27E56.23
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A158.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A252.94
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A359.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D739.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A436.99
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A546.08
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A739.18
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A936.24
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F27.35
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.15
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.28
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I511.49
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.82e-1423
neuroblast (sensu Vertebrata)6.82e-1423
neuron1.31e-0933
neuronal stem cell1.31e-0933
neuroblast1.31e-0933
electrically signaling cell1.31e-0933
electrically responsive cell4.41e-0939
electrically active cell4.41e-0939
ectodermal cell2.05e-0744
neurectodermal cell2.05e-0744
neural cell3.06e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.09e-1954
central nervous system1.75e-1873
nervous system1.87e-1875
neural tube6.69e-1852
neural rod6.69e-1852
future spinal cord6.69e-1852
neural keel6.69e-1852
ectoderm-derived structure8.32e-1795
ectoderm8.32e-1795
presumptive ectoderm8.32e-1795
neurectoderm8.33e-1764
neural plate8.33e-1764
presumptive neural plate8.33e-1764
gray matter1.14e-1634
ecto-epithelium2.11e-1573
structure with developmental contribution from neural crest1.59e-1492
brain1.60e-1447
future brain1.60e-1447
regional part of brain4.90e-1446
brain grey matter3.23e-1329
regional part of telencephalon3.23e-1329
telencephalon3.23e-1329
pre-chordal neural plate6.05e-1349
anterior neural tube1.08e-1240
regional part of forebrain3.85e-1239
forebrain3.85e-1239
future forebrain3.85e-1239
cerebral cortex9.14e-0921
cerebral hemisphere9.14e-0921
pallium9.14e-0921
occipital lobe1.80e-0710
visual cortex1.80e-0710
neocortex1.80e-0710
regional part of cerebral cortex2.91e-0717
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