FFCP PHASE1:Mm9::chr19:36422996..36423040,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:36422996..36423040,+
|short_description=p3@Pcgf5
|description=CAGE_peak_3_at_Pcgf5_5end
|association_with_transcript=52bp_to_uc008hhi.1,uc012bkz.1_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=76073 | |EntrezGene=76073 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UK78 | |UniProt=Q3UK78 | ||
|association_with_transcript=52bp_to_uc008hhi.1,uc012bkz.1_5end | |||
|cluster_id=chr19:36422996..36423040,+ | |||
|description=CAGE_peak_3_at_Pcgf5_5end | |||
|id=chr19:36422996..36423040,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.45e-07!9;CL:0000789!1.45e-07!9;CL:0002420!1.45e-07!9;CL:0002419!1.45e-07!9;CL:0000790!1.45e-07!9;CL:0000838!4.24e-07!12;CL:0000624!6.42e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.56e-08,9;CL:0000789,4.56e-08,9;CL:0002420,4.56e-08,9;CL:0002419,4.56e-08,9;CL:0000790,4.56e-08,9;CL:0000838,1.45e-07,12;CL:0000624,2.28e-07,8;CL:0000084,3.92e-07,11;CL:0000827,3.92e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.55e-08!51;UBERON:0003408!7.91e-08!24;UBERON:0006562!9.11e-08!24;UBERON:0001557!9.11e-08!24;UBERON:0001042!9.11e-08!24;UBERON:0008814!9.11e-08!24;UBERON:0009145!9.11e-08!24;UBERON:0002370!2.00e-07!23;UBERON:0000974!2.00e-07!23;UBERON:0004807!2.00e-07!23;UBERON:0005058!2.00e-07!23;UBERON:0003351!2.00e-07!23;UBERON:0009113!2.00e-07!23;UBERON:0003295!2.00e-07!23;UBERON:0009722!2.00e-07!23;UBERON:0005562!2.00e-07!23;UBERON:0007690!2.00e-07!23;UBERON:0000064!2.23e-07!99;UBERON:0007811!3.01e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.83e-09,51;UBERON:0003408,3.42e-08,24;UBERON:0006562,3.98e-08,24;UBERON:0001557,3.98e-08,24;UBERON:0001042,3.98e-08,24;UBERON:0008814,3.98e-08,24;UBERON:0009145,3.98e-08,24;UBERON:0002370,9.30e-08,23;UBERON:0000974,9.30e-08,23;UBERON:0004807,9.30e-08,23;UBERON:0005058,9.30e-08,23;UBERON:0003351,9.30e-08,23;UBERON:0009113,9.30e-08,23;UBERON:0003295,9.30e-08,23;UBERON:0009722,9.30e-08,23;UBERON:0005562,9.30e-08,23;UBERON:0007690,9.30e-08,23;UBERON:0000072,6.82e-07,27 | |||
|phase1_expression=0.960893082628764,3.14077866875425,5.0049916332849,5.44435580352294,5.00895729946347,1.84667199103079,3.27057696833736,23.1130748960421,50.6839399746,64.6018092648702,29.1070545983358,18.4273687279227,22.9408978107816,21.1557373853974,1.33243904726265,1.01237633694913,0,3.3123527362615,3.01651753932625,2.97072756258621,3.48677489619386,1.68794617041505,1.30599894569468,2.55987876469451,4.35877634027623,2.8711598205751,2.58457197695445,3.878482188346,0.950117097281869,1.76421090831952,3.54768817048488,0,0,0,0.866554859253824,2.82598897109437,0.408338712524738,1.67412652294763,2.3440060335714,2.09409497589519,2.94115744015507,2.04913645487534,3.39857247121808,5.5394599909254,5.17022349219524,5.50640256485045,0,0.872100625521786,0.878744730937887,1.55543919259427,1.1198913730029,2.87505128729943,6.20795642413625,19.5847778343063,17.8129713545506,1.80081605225163,1.14613375975503,2.57836046138721,0.606949382578793,0.528990979272033,0.633831403506179,1.0165335962074,0,0.449949858640699,0.988866362566974,0,0.898800331555214,0,0.207379224616955,0.135005938331691,0,0.571301968807607,0.220868540951614,0,0.0958454710182364,0.919218786610021,7.70811166995721,6.51205424234457,9.36999852863085,0.131886287730194,0.0914876436024097,0.52091337055676,5.30447698102624,7.31591393041184,7.48711414106369,0,0.569486723196412,0.186399445825301,0.37863096666592,0.453429360640713,1.73918693221007,0.860423876981386,12.9194553404473,2.69851595818909,3.89865850468601,3.13618820968135,1.54488862144927,2.72688516124892,3.63700406444016,1.7666978725517,0.845060518660083,2.56652954828636,7.64415719119937,14.2213340630666,1.29894624606728,0.253359865475099,1.01104889002957,3.76806803072898,6.99132285847364,4.15637989381509,0.173485326766136,0.608930956624282,0.461230994512117,0.904335843315735,1.99900802130698,1.38233250462643,14.8316980640624,5.35017620603673,0,1.13236794963186,1.32504911076236,0.969750506270444,0,7.02673912827713,5.23616767033638,3.83185582812887,7.78798309288482,11.9980546198682,5.46401976414178,11.3840885947665,11.4375150704657,0.628271760564322,8.51739168942155,9.46147192122223,9.76603809429932,6.97637431191358,0.407357455401265,1.7416975885413,1.0108910337347,5.05060454127538,0.520481771850815,0.459804208866946,0.900310649026746,0.452114453507145,1.08858398642125,1.5373646434182,2.06143794031403,2.58703370739016,0,0.756424320671277,0.351902248327898,0.43839146485515,0,0,0.823128545631774,0,6.31991868581911,7.97778512055617,5.11494298912067,2.48550927042602,1.64168241986767,2.88099298337624,1.18372367792605,3.34499193970586,3.39387648352232,3.25547522650571,5.633741429392,3.50296027101508,2.96207729844265,4.43252153013557,4.78305976320549,7.89479932096795,7.02560368931362,6.71032093801859,6.9395683026162,0.308713837137853,4.62586296177317,2.3800550999719,0.426576501070468,0.232236671860439,0.38660238396628,0.403367049246685,0.667134131534611,1.14135375667535,0.474529061544512,1.81168850196412,2.5133520880027,1.1937388322469,3.50935356814416,1.79763881730844,1.08069024937347,3.38540164532424,0,0,0,0.407302655690628,0.387904974335251,0.350679099451593,0.758838445491087,1.18088118383682,1.41298855057237,2.83813477020141,3.26097889795864,0.83422552858047,0.393117990226406,0.449724224769707,1.01430060694251,0.72353147925725,0,0.575392274901621,1.13494658742525,0.823684239564244,0,0.372140947668503,0.624075346229121,1.51547326768267,1.4351793081753,3.85954817090694,3.51031061316549,0.37898282354097,0.488894929326078,0,0.234690248288502,0.670025029767263,1.90434912708811,2.34160377429359,0.945810864637146,1.55025282754142,0.478364305972461,2.13022309130459,2.07221978239075,1.59113964439663,1.50791283939272,0,2.45882136509518,0.551873492609465,8.18808008937739,5.50894926983355,4.75411341592359,4.29200576247434,1.57754109708128,2.34263246577983,1.93881057959519,0.477937595905104,0.445597348164788,0.566153061577665,0.809621403349789,0.584511715822624,0.790575555893047,6.10510501201433,0.425820255624806,0.534196811001766,0.81443479676788,1.48473110675282,2.65490276679926,0,0,0.565815239267694,0.885905678642318,0,2.06742634534577,1.45413491791002,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,12.2558258071364,0.18006109403131,0,0,0.177340233642274,1.07021290561242,0.658196082408484,1.2178597964584,2.3467170806371,12.4980921809654,1.32317038832977,2.63818004706368,0.484393280087717,0.301564624640779,0.716234064018819,1.14898629821543,0.874442509889552,6.67531087237835,1.19609616558497,0,0.370389054739423,0.753473828018764,0.546776910884101,0.686334519619568,13.5982743995084,12.8755336137765,11.4705978257672,2.86401185404534,0.474503990371703,0,0.756037385752609,0,0.436725127492355,1.61837215661785,1.32245529160537,1.30877970992015,1.68499465279331,6.21339313086926,1.69107881605257,0.299033092087958,0.165458490457098,1.55560950675238,1.93739735216597,1.85851738039856,0.938857909166032,2.47388331203505,6.71099804324549,2.41584120826006,1.44015003128933,4.74016680942267,0.608175645870493,1.540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| ||
|short_description=p3@Pcgf5 | |||
}} | }} |
Latest revision as of 16:23, 25 September 2015
Short description: | p3@Pcgf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pcgf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 52bp_to_uc008hhi.1, uc012bkz.1_5end |
EntrezGene: | Pcgf5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.56e-08 | 9 |
alpha-beta T cell | 4.56e-08 | 9 |
immature T cell | 4.56e-08 | 9 |
mature T cell | 4.56e-08 | 9 |
immature alpha-beta T cell | 4.56e-08 | 9 |
lymphoid lineage restricted progenitor cell | 1.45e-07 | 12 |
CD4-positive, alpha-beta T cell | 2.28e-07 | 8 |
T cell | 3.92e-07 | 11 |
pro-T cell | 3.92e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.83e-09 | 51 |
gland of gut | 3.42e-08 | 24 |
pharynx | 3.98e-08 | 24 |
upper respiratory tract | 3.98e-08 | 24 |
chordate pharynx | 3.98e-08 | 24 |
pharyngeal arch system | 3.98e-08 | 24 |
pharyngeal region of foregut | 3.98e-08 | 24 |
thymus | 9.30e-08 | 23 |
neck | 9.30e-08 | 23 |
respiratory system epithelium | 9.30e-08 | 23 |
hemolymphoid system gland | 9.30e-08 | 23 |
pharyngeal epithelium | 9.30e-08 | 23 |
thymic region | 9.30e-08 | 23 |
pharyngeal gland | 9.30e-08 | 23 |
entire pharyngeal arch endoderm | 9.30e-08 | 23 |
thymus primordium | 9.30e-08 | 23 |
early pharyngeal endoderm | 9.30e-08 | 23 |
segment of respiratory tract | 6.82e-07 | 27 |