FFCP PHASE1:Mm9::chr19:56500173..56500184,+: Difference between revisions
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|id=chr19:56500173..56500184,+
|short_description=p@chr19:56500173..56500184,+
|description=CAGE_peak_at_chr19:56500173..56500184,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:56500173..56500184,+ | |||
|description=CAGE_peak_at_chr19:56500173..56500184,+ | |||
|id=chr19:56500173..56500184,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.33e-16!9;UBERON:0000019!1.33e-16!9;UBERON:0000047!1.33e-16!9;UBERON:0004088!1.33e-16!9;UBERON:0002104!1.33e-16!9;UBERON:0001456!1.33e-16!9;UBERON:0003072!1.33e-16!9;UBERON:0003071!1.33e-16!9;UBERON:0004128!1.33e-16!9;UBERON:0007100!7.28e-15!18;UBERON:0000948!7.28e-15!18;UBERON:0005498!7.28e-15!18;UBERON:0004140!7.28e-15!18;UBERON:0009881!7.28e-15!18;UBERON:0004141!7.28e-15!18;UBERON:0003084!7.28e-15!18;UBERON:0007005!7.28e-15!18;UBERON:0004139!7.28e-15!18;UBERON:0004291!7.28e-15!18;UBERON:0001444!2.77e-13!11;UBERON:0003103!4.04e-12!43;UBERON:0000020!4.87e-12!12;UBERON:0001032!4.87e-12!12;UBERON:0004456!4.87e-12!12;UBERON:0004535!4.81e-11!23;UBERON:0001009!4.81e-11!23;UBERON:0005085!5.49e-11!13;UBERON:0004872!3.73e-08!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.35e-39,9;UBERON:0000019,2.35e-39,9;UBERON:0000047,2.35e-39,9;UBERON:0010312,2.35e-39,9;UBERON:0004088,2.35e-39,9;UBERON:0002104,2.35e-39,9;UBERON:0001456,2.35e-39,9;UBERON:0003072,2.35e-39,9;UBERON:0004128,2.35e-39,9;UBERON:0003071,2.35e-39,9;UBERON:0001444,3.05e-32,11;UBERON:0000020,1.43e-29,12;UBERON:0001032,1.43e-29,12;UBERON:0004456,1.43e-29,12;UBERON:0000033,2.61e-27,13;UBERON:0005085,2.61e-27,13;UBERON:0007811,6.98e-10,36;UBERON:0000153,2.93e-08,43;UBERON:0003056,3.12e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.260240885925407,0.689706313300419,4.68161537493908,2.86339153887859,3.53789795586905,2.94661556655154,2.15513966487376,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.324275238183423,0.146199987425332,0.658650345873152,0.939444931322602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.252946148497029,0.738050739898011,1.72698600625512,1.35736880313981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57053565190418,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.260240885925407,0.689706313300419,4.68161537493908,2.86339153887859,3.53789795586905,2.94661556655154,2.15513966487376,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.324275238183423,0.146199987425332,0.658650345873152,0.939444931322602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.252946148497029,0.738050739898011,1.72698600625512,1.35736880313981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57053565190418,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr19:56500173..56500184,+ | |||
}} | }} |
Latest revision as of 09:18, 4 August 2015
Short description: | p@chr19:56500173..56500184, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:56500173..56500184, + |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.35e-39 | 9 |
camera-type eye | 2.35e-39 | 9 |
simple eye | 2.35e-39 | 9 |
immature eye | 2.35e-39 | 9 |
ocular region | 2.35e-39 | 9 |
visual system | 2.35e-39 | 9 |
face | 2.35e-39 | 9 |
optic cup | 2.35e-39 | 9 |
optic vesicle | 2.35e-39 | 9 |
eye primordium | 2.35e-39 | 9 |
subdivision of head | 3.05e-32 | 11 |
sense organ | 1.43e-29 | 12 |
sensory system | 1.43e-29 | 12 |
entire sense organ system | 1.43e-29 | 12 |
head | 2.61e-27 | 13 |
ectodermal placode | 2.61e-27 | 13 |
craniocervical region | 6.98e-10 | 36 |
anterior region of body | 2.93e-08 | 43 |
pre-chordal neural plate | 3.12e-07 | 49 |