FFCP PHASE1:Mm9::chr1:173769825..173769830,+: Difference between revisions
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|id=chr1:173769825..173769830,+
|short_description=p5@Cd84
|description=CAGE_peak_5_at_Cd84_5end
|association_with_transcript=0bp_to_ENSMUST00000155802,NM_001252472...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12523 | |EntrezGene=12523 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=67 | |||
|TSSclassifier=NA | |||
|UniProt=Q18PI6,B2RU38 | |UniProt=Q18PI6,B2RU38 | ||
|association_with_transcript=0bp_to_ENSMUST00000155802,NM_001252472,NM_013489,uc007dpe.2_5end | |||
|cluster_id=chr1:173769825..173769830,+ | |||
|description=CAGE_peak_5_at_Cd84_5end | |||
|id=chr1:173769825..173769830,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,1.07e-17,2;CL:0002092,1.37e-11,3;CL:0002540,1.37e-11,3;CL:0002194,2.53e-09,4;CL:0000766,2.53e-09,4;CL:0000234,2.53e-09,4;CL:0000576,2.53e-09,4;CL:0000235,2.53e-09,4;CL:0000864,2.53e-09,4;CL:0002009,2.53e-09,4;CL:0000040,2.53e-09,4;CL:0000559,2.53e-09,4;CL:0000355,1.69e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.40e-24,3;DOID:4045,3.40e-24,3;DOID:0050686,1.89e-12,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.62e-12,32;UBERON:0001134,1.69e-08,9;UBERON:0002036,1.69e-08,9;UBERON:0002385,1.69e-08,9;UBERON:0000486,1.69e-08,9;UBERON:0007503,1.69e-08,9;UBERON:0001015,1.69e-08,9;UBERON:0002329,1.69e-08,9;UBERON:0003082,1.69e-08,9;UBERON:0003059,1.69e-08,9;UBERON:0007282,1.69e-08,9;UBERON:0004290,1.69e-08,9;UBERON:0009618,1.69e-08,9;UBERON:0002371,1.74e-08,16;UBERON:0000383,1.05e-07,10;UBERON:0007524,4.73e-07,11;UBERON:0003077,4.73e-07,11;UBERON:0007285,4.73e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,1.5626706890476,1.0470474879476,2.35292595212406,6.83045484958446,4.85510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0.899899717281399,2.96659908770092,2.8419204597844,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,1.03909497345377,0,0,0,0,0.23517741427141,0,0.494389935468748,0.289198713839823,0.884610551949874,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,18.0949540727127,8.15858525728064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0,0,0.555583582109135,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,1.5626706890476,1.0470474879476,2.35292595212406,6.83045484958446,4.85510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0.899899717281399,2.96659908770092,2.8419204597844,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,1.03909497345377,0,0,0,0,0.23517741427141,0,0.494389935468748,0.289198713839823,0.884610551949874,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,18.0949540727127,8.15858525728064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0,0,0.555583582109135,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p5@Cd84 | |||
}} | }} |
Latest revision as of 19:23, 26 September 2015
Short description: | p5@Cd84 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cd84_5end |
Coexpression cluster: | MCL_coexpression_mm9:67 |
Association with transcript: | 0bp_to_ENSMUST00000155802, NM_001252472, NM_013489, uc007dpe.2_5end |
EntrezGene: | Cd84 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 1.07e-17 | 2 |
bone marrow cell | 1.37e-11 | 3 |
mesenchymal stem cell of the bone marrow | 1.37e-11 | 3 |
monopoietic cell | 2.53e-09 | 4 |
myeloid leukocyte | 2.53e-09 | 4 |
phagocyte | 2.53e-09 | 4 |
monocyte | 2.53e-09 | 4 |
macrophage | 2.53e-09 | 4 |
tissue-resident macrophage | 2.53e-09 | 4 |
macrophage dendritic cell progenitor | 2.53e-09 | 4 |
monoblast | 2.53e-09 | 4 |
promonocyte | 2.53e-09 | 4 |
multi-potent skeletal muscle stem cell | 1.69e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.62e-12 | 32 |
skeletal muscle tissue | 1.69e-08 | 9 |
striated muscle tissue | 1.69e-08 | 9 |
muscle tissue | 1.69e-08 | 9 |
multilaminar epithelium | 1.69e-08 | 9 |
epithelial vesicle | 1.69e-08 | 9 |
musculature | 1.69e-08 | 9 |
somite | 1.69e-08 | 9 |
myotome | 1.69e-08 | 9 |
presomitic mesoderm | 1.69e-08 | 9 |
presumptive segmental plate | 1.69e-08 | 9 |
dermomyotome | 1.69e-08 | 9 |
trunk paraxial mesoderm | 1.69e-08 | 9 |
bone marrow | 1.74e-08 | 16 |
musculature of body | 1.05e-07 | 10 |
dense mesenchyme tissue | 4.73e-07 | 11 |
paraxial mesoderm | 4.73e-07 | 11 |
presumptive paraxial mesoderm | 4.73e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.40e-24 | 3 |
muscle cancer | 3.40e-24 | 3 |
organ system cancer | 1.89e-12 | 6 |