Personal tools

FFCP PHASE1:Mm9::chr1:58643225..58643245,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr1:58643225..58643245,+ |short_description=p3@Ndufb3 |description=CAGE_peak_3_at_Ndufb3_5end |association_with_transcript=0bp_to_ENSMUST00000027193_5end |Ent...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr1:58643225..58643245,+
|DHSsupport=NA
|short_description=p3@Ndufb3
|DPIdataset=NA
|description=CAGE_peak_3_at_Ndufb3_5end
|association_with_transcript=0bp_to_ENSMUST00000027193_5end
|EntrezGene=66495
|EntrezGene=66495
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9CQZ6
|UniProt=Q9CQZ6
|association_with_transcript=0bp_to_ENSMUST00000027193_5end
|cluster_id=chr1:58643225..58643245,+
|description=CAGE_peak_3_at_Ndufb3_5end
|id=chr1:58643225..58643245,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!9.69e-08!15
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.23e-08,15
|phase1_expression=2.40223270657191,4.53668029931169,5.45999087267443,3.62957053568196,3.50627010962443,2.85394762250213,2.80335168714631,2.32421982194837,0.140788722151667,0,0.856089841127525,0.558405112967355,1.19840510951844,1.57356724354195,0.999329285446988,1.01237633694913,0.699561878128147,2.05050407482854,1.37114433605739,5.09267582157636,3.82694805679814,2.08510997521859,3.39559725880616,4.63978026100879,6.42345986988076,9.18771142584032,6.8921919385452,6.67960821326256,3.04037471130198,5.29263272495855,2.88249663851896,0.635030673459631,0,0,2.02196133825892,4.48833542467929,3.06254034393554,2.51118978442145,1.5626706890476,2.09409497589519,2.35292595212406,1.36609096991689,4.36959317728038,2.39203954153597,1.52065396829272,1.28482726513177,0.782391344348039,1.52617609466313,0.878744730937887,0.777719596297134,0.699932108126813,0,1.17447824240415,0.725362142011344,0.672187598284928,3.60163210450326,1.71920063963254,5.15672092277442,1.82084814773638,0.528990979272033,3.1691570175309,2.37191172448392,0,4.49949858640699,1.97773272513395,2.1314403448383,1.49800055259202,1.15265491596466,2.07379224616955,1.21505344498522,2.94454945891935,3.14216082844184,2.65042249141936,2.20483438586917,1.34183659425531,2.75765635983006,3.30347642998166,2.29837208553338,3.37934373163736,1.18697658957174,1.37231465403614,2.08365348222704,6.42120897703176,2.25105044012672,2.75036845998258,3.83017161115768,2.42031857358475,1.1183966749518,1.96888102666279,1.43585964202892,2.6087803983151,5.16254326188832,0,1.07940638327563,2.59910566979068,2.24013443548668,3.23022166303029,1.36344258062446,2.33807404142582,1.06001872353102,2.81686839553361,0,0,0,4.11332977921307,4.30711771307668,3.0331466700887,2.51204535381932,0.776813650941515,1.1875371125186,1.56136794089522,1.21786191324856,2.30615497256059,1.3565037649736,1.76383060703557,2.76466500925286,1.48316980640624,2.89198713839823,0,0.808834249737046,1.10420759230197,0.969750506270444,0,1.17112318804619,1.8850203613211,3.32094171771169,1.55759661857696,1.79970819298022,2.28726408731516,1.49790639404823,1.83000241127451,1.00523481690292,1.91206752211504,4.34716277461562,1.87009240103604,1.1356888414743,0.916554274652847,1.61729061793121,0.252722758433675,1.05220927943237,1.17108398666433,1.14951052216736,0.900310649026746,1.35634336052144,1.42876648217788,1.92170580427275,0.937017245597288,2.32833033665114,1.72454394346274,0.378212160335639,1.40760899331159,3.06874025398605,3.05851974148158,1.39300866608867,1.64625709126355,1.59227413454795,2.80885274925294,0.772043721344145,1.13665399758237,1.44988040774851,2.81431271977315,1.98068267607116,0.473489471170421,2.16440654922144,2.00547246753592,2.32533944750408,2.95100741539581,0.934122738937356,1.48103864922132,3.61168420974009,3.08061476274252,3.94739966048397,1.97595103761946,2.54992195644706,1.89260953707715,1.02904612379284,1.65209391491899,2.64450566663544,2.55945900642281,1.16118335930219,1.80414445850931,1.4117846723634,0.667134131534611,0.570676878337677,2.84717436926707,1.15289268306808,2.01068167040216,1.1937388322469,0.19496408711912,0.898819408654221,1.94524244887225,2.58883655230677,1.32767530667157,1.37098215131675,2.25415471346161,0.407302655690628,1.55161989734101,1.47285221769669,2.21327879934901,1.47610147979602,2.82597710114475,2.71473760627961,2.07516838961004,2.50267658574141,0.786235980452812,2.02375901146368,1.01430060694251,0.72353147925725,1.2731292589071,1.72617682470486,0.648540907100142,1.09824565275233,4.31304619582064,0.372140947668503,0.936113019343682,2.02063102357689,3.04975602987251,2.41221760681684,2.58654466233247,1.70542270593436,1.30371981153621,1.01847051465113,1.64283173801951,1.17254380209271,1.42826184531608,1.36593553500459,1.10344600874334,0.664394068946325,0.956728611944923,2.62181303545181,2.24490476425664,2.16973587872267,1.50791283939272,2.17562273527484,0.491764273019036,0.551873492609465,1.9266070798535,2.57865710502847,1.14754461763673,2.27223834483936,0.94652465824877,2.73307121007647,1.07711698866399,1.43381278771531,1.55959071857676,1.13230612315533,0.404810701674894,2.33804686329049,0.790575555893047,1.60660658210904,1.56134093729095,1.06839362200353,0.977321756121456,0.989820737835213,0,3.64170954232472,1.81394134178851,1.50884063804718,0.590603785761546,1.22974059177571,0.516856586336442,0.727067458955011,2.13898427030833,1.8962205476149,1.05418608574999,1.03135543248187,0.340439605753788,1.44048875225048,1.94038025674132,1.07168517515796,1.41872186913819,1.78368817602071,0.822745103010605,0.304464949114599,0,0.63549621259146,0.661585194164886,1.31909002353184,1.29171541356724,1.74907482291652,0.954978752025092,0.984845398470368,1.45740418314925,2.59595422814714,1.53783792718067,2.27025554759545,0.740778109478847,2.26042148405629,1.50363650493128,1.83022538565218,1.01987057996313,1.6794174278839,0.552799895217695,2.86401185404534,1.42351197111511,1.62655573701479,1.40406943068342,1.25452977608681,2.18362563746178,1.34864346384821,0.909188012978695,0.523511883968059,2.20345454596048,0.621339313086926,5.6369293868419,2.54178128274764,2.64733584731356,3.11121901350476,1.80823752868824,1.85851738039856,1.76035857968631,0.911430693907651,1.04859344425711,4.59009829569411,4.03242008761012,0.948033361884535,0.608175645870493,1.43795340030758,1.29920822977795,0.716106782669926,1.58945083825012,0.841368146639782,1.32920574457119,1.41353029927407,1.37172251979,1.31074040677893,2.14407337627455,2.30908419936791,2.10378423926824,2.0405734525369,0.665957860122194,1.16628013592318,1.51096154727671,0.579568782096571,1.12609485270709,1.28206136987086,1.2862102744744,0,2.25900737046827,0.460325236507177,1.71868654031819,5.499301834998,2.05524755931193,2.2661816921691,3.37511250115903,2.2516060161211,3.62513927187364,2.07104124700728,1.66059756134683,1.59609949360412,2.04880326904961,0.972426868273176,2.30574478890781,1.83843508450014,1.77797382241292,0.824140228955577,1.28367683836726,1.01078884705519,1.77435509923168,1.50901073108861,1.96647165686753,1.92075457214608,1.26358031702349,1.42888107384922,1.50649623728312,1.92909220463705,2.47251540481984,2.20798380201596,1.02860775715625,1.24233064311536,1.66905332963125,1.16277133305863,2.25862512996793,2.19997980518359,1.28049581010941,1.05227884575137,2.71608227691724,0.561142271657738,1.66089025373844,0.985044823755635,2.45538625901814,0.77468420592983,1.35034627686799,0.749431733813838,0.701794825336225,0.429742108096597,1.72159498861959,1.32354851471709,2.55054619182464
|phase1_expression=2.40223270657191,4.53668029931169,5.45999087267443,3.62957053568196,3.50627010962443,2.85394762250213,2.80335168714631,2.32421982194837,0.140788722151667,0,0.856089841127525,0.558405112967355,1.19840510951844,1.57356724354195,0.999329285446988,1.01237633694913,0.699561878128147,2.05050407482854,1.37114433605739,5.09267582157636,3.82694805679814,2.08510997521859,3.39559725880616,4.63978026100879,6.42345986988076,9.18771142584032,6.8921919385452,6.67960821326256,3.04037471130198,5.29263272495855,2.88249663851896,0.635030673459631,0,0,2.02196133825892,4.48833542467929,3.06254034393554,2.51118978442145,1.5626706890476,2.09409497589519,2.35292595212406,1.36609096991689,4.36959317728038,2.39203954153597,1.52065396829272,1.28482726513177,0.782391344348039,1.52617609466313,0.878744730937887,0.777719596297134,0.699932108126813,0,1.17447824240415,0.725362142011344,0.672187598284928,3.60163210450326,1.71920063963254,5.15672092277442,1.82084814773638,0.528990979272033,3.1691570175309,2.37191172448392,0,4.49949858640699,1.97773272513395,2.1314403448383,1.49800055259202,1.15265491596466,2.07379224616955,1.21505344498522,2.94454945891935,3.14216082844184,2.65042249141936,2.20483438586917,1.34183659425531,2.75765635983006,3.30347642998166,2.29837208553338,3.37934373163736,1.18697658957174,1.37231465403614,2.08365348222704,6.42120897703176,2.25105044012672,2.75036845998258,3.83017161115768,2.42031857358475,1.1183966749518,1.96888102666279,1.43585964202892,2.6087803983151,5.16254326188832,0,1.07940638327563,2.59910566979068,2.24013443548668,3.23022166303029,1.36344258062446,2.33807404142582,1.06001872353102,2.81686839553361,0,0,0,4.11332977921307,4.30711771307668,3.0331466700887,2.51204535381932,0.776813650941515,1.1875371125186,1.56136794089522,1.21786191324856,2.30615497256059,1.3565037649736,1.76383060703557,2.76466500925286,1.48316980640624,2.89198713839823,0,0.808834249737046,1.10420759230197,0.969750506270444,0,1.17112318804619,1.8850203613211,3.32094171771169,1.55759661857696,1.79970819298022,2.28726408731516,1.49790639404823,1.83000241127451,1.00523481690292,1.91206752211504,4.34716277461562,1.87009240103604,1.1356888414743,0.916554274652847,1.61729061793121,0.252722758433675,1.05220927943237,1.17108398666433,1.14951052216736,0.900310649026746,1.35634336052144,1.42876648217788,1.92170580427275,0.937017245597288,2.32833033665114,1.72454394346274,0.378212160335639,1.40760899331159,3.06874025398605,3.05851974148158,1.39300866608867,1.64625709126355,1.59227413454795,2.80885274925294,0.772043721344145,1.13665399758237,1.44988040774851,2.81431271977315,1.98068267607116,0.473489471170421,2.16440654922144,2.00547246753592,2.32533944750408,2.95100741539581,0.934122738937356,1.48103864922132,3.61168420974009,3.08061476274252,3.94739966048397,1.97595103761946,2.54992195644706,1.89260953707715,1.02904612379284,1.65209391491899,2.64450566663544,2.55945900642281,1.16118335930219,1.80414445850931,1.4117846723634,0.667134131534611,0.570676878337677,2.84717436926707,1.15289268306808,2.01068167040216,1.1937388322469,0.19496408711912,0.898819408654221,1.94524244887225,2.58883655230677,1.32767530667157,1.37098215131675,2.25415471346161,0.407302655690628,1.55161989734101,1.47285221769669,2.21327879934901,1.47610147979602,2.82597710114475,2.71473760627961,2.07516838961004,2.50267658574141,0.786235980452812,2.02375901146368,1.01430060694251,0.72353147925725,1.2731292589071,1.72617682470486,0.648540907100142,1.09824565275233,4.31304619582064,0.372140947668503,0.936113019343682,2.02063102357689,3.04975602987251,2.41221760681684,2.58654466233247,1.70542270593436,1.30371981153621,1.01847051465113,1.64283173801951,1.17254380209271,1.42826184531608,1.36593553500459,1.10344600874334,0.664394068946325,0.956728611944923,2.62181303545181,2.24490476425664,2.16973587872267,1.50791283939272,2.17562273527484,0.491764273019036,0.551873492609465,1.9266070798535,2.57865710502847,1.14754461763673,2.27223834483936,0.94652465824877,2.73307121007647,1.07711698866399,1.43381278771531,1.55959071857676,1.13230612315533,0.404810701674894,2.33804686329049,0.790575555893047,1.60660658210904,1.56134093729095,1.06839362200353,0.977321756121456,0.989820737835213,0,3.64170954232472,1.81394134178851,1.50884063804718,0.590603785761546,1.22974059177571,0.516856586336442,0.727067458955011,2.13898427030833,1.8962205476149,1.05418608574999,1.03135543248187,0.340439605753788,1.44048875225048,1.94038025674132,1.07168517515796,1.41872186913819,1.78368817602071,0.822745103010605,0.304464949114599,0,0.63549621259146,0.661585194164886,1.31909002353184,1.29171541356724,1.74907482291652,0.954978752025092,0.984845398470368,1.45740418314925,2.59595422814714,1.53783792718067,2.27025554759545,0.740778109478847,2.26042148405629,1.50363650493128,1.83022538565218,1.01987057996313,1.6794174278839,0.552799895217695,2.86401185404534,1.42351197111511,1.62655573701479,1.40406943068342,1.25452977608681,2.18362563746178,1.34864346384821,0.909188012978695,0.523511883968059,2.20345454596048,0.621339313086926,5.6369293868419,2.54178128274764,2.64733584731356,3.11121901350476,1.80823752868824,1.85851738039856,1.76035857968631,0.911430693907651,1.04859344425711,4.59009829569411,4.03242008761012,0.948033361884535,0.608175645870493,1.43795340030758,1.29920822977795,0.716106782669926,1.58945083825012,0.841368146639782,1.32920574457119,1.41353029927407,1.37172251979,1.31074040677893,2.14407337627455,2.30908419936791,2.10378423926824,2.0405734525369,0.665957860122194,1.16628013592318,1.51096154727671,0.579568782096571,1.12609485270709,1.28206136987086,1.2862102744744,0,2.25900737046827,0.460325236507177,1.71868654031819,5.499301834998,2.05524755931193,2.2661816921691,3.37511250115903,2.2516060161211,3.62513927187364,2.07104124700728,1.66059756134683,1.59609949360412,2.04880326904961,0.972426868273176,2.30574478890781,1.83843508450014,1.77797382241292,0.824140228955577,1.28367683836726,1.01078884705519,1.77435509923168,1.50901073108861,1.96647165686753,1.92075457214608,1.26358031702349,1.42888107384922,1.50649623728312,1.92909220463705,2.47251540481984,2.20798380201596,1.02860775715625,1.24233064311536,1.66905332963125,1.16277133305863,2.25862512996793,2.19997980518359,1.28049581010941,1.05227884575137,2.71608227691724,0.561142271657738,1.66089025373844,0.985044823755635,2.45538625901814,0.77468420592983,1.35034627686799,0.749431733813838,0.701794825336225,0.429742108096597,1.72159498861959,1.32354851471709,2.55054619182464
|short_description=p3@Ndufb3
}}
}}

Latest revision as of 06:07, 27 September 2015

Short description:p3@Ndufb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ndufb3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000027193_5end
EntrezGene:Ndufb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ndufb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.42
GP2+ M cell, pool1.CNhs13228.11845-124H99.19
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I26.68
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C15.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.29
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G13.61
heart, neonate N16.CNhs11209.782-15G13.08
heart, neonate N20.CNhs11127.821-26I63.95
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D52.21
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A22.14
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G22.10
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mucosa8.23e-0815
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:58643225..58643245,%2B&oldid=4296330"