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FFCP PHASE1:Mm9::chr2:156005871..156005937,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:156005871..156005937,-
|DHSsupport=NA
|short_description=p1@Rbm39
|DPIdataset=NA
|description=CAGE_peak_1_at_Rbm39_5end
|association_with_transcript=0bp_to_ENSMUST00000029149,ENSMUST00000126992,ENSMUST00000132929,ENSMUST00000137340,ENSMUST00000137566,ENSMUST00000142071,ENSMUST00000146288,ENSMUST00000146549,ENSMUST00000147098,ENSMUST00000152919,ENSMUST00000153514,ENSMUST00000155837_5end
|EntrezGene=170791
|EntrezGene=170791
|HGNC=
|HGNC=
|MCL_coexpression_id=298
|TSSclassifier=NA
|UniProt=Q3U313,Q8VH51,B7ZD61,D6RCZ8,E9Q8F0,B7ZD63,E9PZF9,E9Q999
|UniProt=Q3U313,Q8VH51,B7ZD61,D6RCZ8,E9Q8F0,B7ZD63,E9PZF9,E9Q999
|association_with_transcript=0bp_to_ENSMUST00000029149,ENSMUST00000126992,ENSMUST00000132929,ENSMUST00000137340,ENSMUST00000137566,ENSMUST00000142071,ENSMUST00000146288,ENSMUST00000146549,ENSMUST00000147098,ENSMUST00000152919,ENSMUST00000153514,ENSMUST00000155837_5end
|cluster_id=chr2:156005871..156005937,-
|description=CAGE_peak_1_at_Rbm39_5end
|id=chr2:156005871..156005937,-
|ontology_enrichment_celltype=CL:0000542!2.96e-07!13;CL:0000051!2.96e-07!13;CL:0000838!5.35e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000542,2.96e-07,13;CL:0000051,2.96e-07,13;CL:0000838,5.35e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000065!7.88e-07!41
|ontology_enrichment_uberon_v019_2=UBERON:0000153,4.75e-07,43;UBERON:0000065,7.88e-07,41
|phase1_expression=259.441132309766,238.350203417684,214.304641752471,266.470970161317,273.989964280652,213.2066753281,196.468230740837,463.165361184934,523.030102793442,563.62737938336,305.281637346075,311.82936951277,457.448350376182,457.645806663451,245.835004219959,258.358441189418,225.258924757263,348.270230555494,363.079020187996,342.906838652808,168.725887659722,307.206203015539,239.781406429543,176.311649918334,161.962952433422,188.922316193842,187.812230325357,204.482199818909,160.759812860092,185.746205633069,169.845571161963,104.14503044738,108.251402614884,110.937176710807,210.86168241843,194.494535069436,229.690525795165,498.05264057692,362.539599859043,437.665849962095,725.289424742241,596.981753853682,487.937904796309,220.697121911187,207.822709000005,189.053154726532,72.7623950243676,52.7620878440681,29.4379484864192,59.1066893185822,46.7554648228711,47.4383462404406,495.629818294553,430.865112354739,451.710066047472,153.326623877424,195.129272598293,156.248643960065,92.8632555345554,83.5805747249812,77.3274312277539,45.7440118293328,48.0219189900015,51.2942838850397,76.142709917657,71.04801149461,38.9480143673926,52.637907829053,161.652105588917,89.2389252372475,115.468403781909,73.9836049605851,89.4517590854035,149.928738239104,107.634463953479,73.5375029288017,183.893521268979,141.860632612644,180.180463509574,88.1000402037695,85.540946768253,114.600941522487,90.1761086774461,175.019171719852,166.855686572277,188.562294703147,184.08658327324,148.74675776859,167.43061345967,182.42974609778,456.536569705143,160.038841118538,195.831744107832,148.958080892038,166.992539284051,181.898916161518,159.263972429407,219.34382515796,147.558450614429,148.755960868853,211.687659924351,170.674214961043,71.3454671178608,42.6640021891999,158.038459938186,157.843196190986,157.218102399598,206.44445453206,564.225648467187,225.335167100404,180.077769183249,199.12042281614,194.870095181369,217.944938239092,268.57260709795,180.959891514733,297.869936119921,263.460028308079,261.844723377163,212.561640830896,223.712458200379,252.135131630315,221.806195849565,270.236675641658,274.375185925626,213.817555209591,552.826984470316,410.333467999491,447.414269524261,204.164641508773,254.370335167156,191.874195676344,207.372413989386,219.659577846754,195.112973841427,216.592086195456,257.755429905151,245.828173925544,183.476722622848,219.280413833706,297.064971283853,253.582021190121,274.414685823352,283.777171984651,343.176101719298,314.775410739876,256.555321844538,293.887029159522,170.729850402811,320.345699804286,302.635933561992,239.800131275767,344.500541790516,253.179325061615,288.094990971121,295.963954759099,452.927505817036,392.712906257055,374.243328703995,203.190382857327,232.180799381285,232.46012134617,220.882838301001,237.100899255622,239.268292088324,249.741456661938,220.520735950487,268.793818129224,239.434581624114,253.802899466281,252.367204116249,225.878980572138,198.692854338401,204.664788609567,237.4173519289,216.922922895532,217.085140420355,211.296002764172,290.925173730059,309.339246918104,251.549284500726,241.011811924894,216.373836661059,186.991790468646,223.503187987465,144.11158538351,230.725721678647,236.559245256928,234.346832717182,225.60367157221,221.325363071687,231.999583341338,83.4538764193559,287.677754751297,296.421344820202,293.868866080788,267.072574829821,312.66548507104,290.002759251844,300.829481582429,240.051054869462,211.255944634122,164.827660660455,235.418444165409,229.974024282448,227.335595621087,253.980871978406,224.777112889252,232.218776824655,250.583335719656,261.037715107807,205.646498477873,346.481377730924,248.962293990229,234.65233018215,197.264103676694,195.722578152406,177.539215861719,323.687589171891,232.126979418844,264.65512174185,267.178765010146,313.076791216862,324.627126922239,330.642617190673,323.141320852515,341.122451845797,323.338446887211,312.052982262702,314.453700939501,252.810813451671,279.606630238062,164.362499493807,189.82308365273,215.884515855357,236.75372832946,178.8533572464,184.842829755904,173.771042099276,160.823980629186,196.561620696328,186.239281029497,228.779648392232,194.042663937472,240.176970660821,234.670444023942,206.048647152521,209.839705980322,268.400401225689,277.621617388441,276.783166156124,155.273206397847,260.782021925075,272.200702904684,273.454984980323,198.108999102465,190.766164444758,273.477365646052,134.657663153632,238.877109952432,272.641849292473,239.205193996199,221.741369355297,289.173633511272,277.250940552247,271.246478742731,266.90465091097,302.32257687857,86.1528833993145,221.838831257698,282.148311724857,209.940098317637,243.203452449935,108.693986833912,228.33557194599,240.005736288708,283.158463102571,330.432050894726,341.820191315232,259.586828890783,228.836783454013,284.456179258191,238.139843526588,162.247139259196,275.956472488532,235.07464261011,270.01362090504,286.69679156114,313.713252619753,261.722230148262,642.178508516785,641.957311808619,617.753882905774,189.979452985008,247.058410986867,255.775889645576,256.404679110956,234.178891536205,240.853907812034,226.706966272884,238.372566311869,187.679010402549,218.271615023379,235.487599659945,157.834022831573,290.959198601583,185.313509311949,259.786787627648,169.199368755828,242.114127828285,296.327027580529,300.772128989525,341.107447416837,254.62966335061,192.116014173996,476.228758786665,172.113707781349,218.774338761082,282.317948330749,288.949086807315,295.041811850178,297.603933011443,331.415298979751,380.643516304517,357.181302791984,354.908171681679,444.70030981549,413.807130895057,430.691384539082,206.551379473458,163.603647636686,206.521297915013,180.979616440477,230.281996086371,245.300995414695,261.17421620512,230.660375889075,220.190153671525,230.418751787763,203.924079772679,218.846086133849,184.054758290089,195.248518134633,197.913201116102,211.957065072787,186.432978134827,196.663805499145,207.62188501248,319.872605254432,274.529112899909,244.831990651428,258.908653677733,242.732042323204,203.330920345716,250.916555688024,274.232661184968,263.47467107488,248.401359163813,269.448495783325,253.513802822886,247.962711780249,249.95419498861,250.533515584385,270.534816648786,239.417017402071,238.821614934067,274.449209935002,258.628502676136,284.238610227509,252.548072164737,258.703266092843,260.170085771868,286.374844603851,256.636105735455,248.599115134098,253.599201826081,258.571032762521,254.197449060956,236.914131193976,231.485533582574,270.092488491995,272.378966804928,239.204197616615,130.401121683608,242.821009566334,237.002772615273,262.830168262591,199.194051464922,211.695333921445
|phase1_expression=259.441132309766,238.350203417684,214.304641752471,266.470970161317,273.989964280652,213.2066753281,196.468230740837,463.165361184934,523.030102793442,563.62737938336,305.281637346075,311.82936951277,457.448350376182,457.645806663451,245.835004219959,258.358441189418,225.258924757263,348.270230555494,363.079020187996,342.906838652808,168.725887659722,307.206203015539,239.781406429543,176.311649918334,161.962952433422,188.922316193842,187.812230325357,204.482199818909,160.759812860092,185.746205633069,169.845571161963,104.14503044738,108.251402614884,110.937176710807,210.86168241843,194.494535069436,229.690525795165,498.05264057692,362.539599859043,437.665849962095,725.289424742241,596.981753853682,487.937904796309,220.697121911187,207.822709000005,189.053154726532,72.7623950243676,52.7620878440681,29.4379484864192,59.1066893185822,46.7554648228711,47.4383462404406,495.629818294553,430.865112354739,451.710066047472,153.326623877424,195.129272598293,156.248643960065,92.8632555345554,83.5805747249812,77.3274312277539,45.7440118293328,48.0219189900015,51.2942838850397,76.142709917657,71.04801149461,38.9480143673926,52.637907829053,161.652105588917,89.2389252372475,115.468403781909,73.9836049605851,89.4517590854035,149.928738239104,107.634463953479,73.5375029288017,183.893521268979,141.860632612644,180.180463509574,88.1000402037695,85.540946768253,114.600941522487,90.1761086774461,175.019171719852,166.855686572277,188.562294703147,184.08658327324,148.74675776859,167.43061345967,182.42974609778,456.536569705143,160.038841118538,195.831744107832,148.958080892038,166.992539284051,181.898916161518,159.263972429407,219.34382515796,147.558450614429,148.755960868853,211.687659924351,170.674214961043,71.3454671178608,42.6640021891999,158.038459938186,157.843196190986,157.218102399598,206.44445453206,564.225648467187,225.335167100404,180.077769183249,199.12042281614,194.870095181369,217.944938239092,268.57260709795,180.959891514733,297.869936119921,263.460028308079,261.844723377163,212.561640830896,223.712458200379,252.135131630315,221.806195849565,270.236675641658,274.375185925626,213.817555209591,552.826984470316,410.333467999491,447.414269524261,204.164641508773,254.370335167156,191.874195676344,207.372413989386,219.659577846754,195.112973841427,216.592086195456,257.755429905151,245.828173925544,183.476722622848,219.280413833706,297.064971283853,253.582021190121,274.414685823352,283.777171984651,343.176101719298,314.775410739876,256.555321844538,293.887029159522,170.729850402811,320.345699804286,302.635933561992,239.800131275767,344.500541790516,253.179325061615,288.094990971121,295.963954759099,452.927505817036,392.712906257055,374.243328703995,203.190382857327,232.180799381285,232.46012134617,220.882838301001,237.100899255622,239.268292088324,249.741456661938,220.520735950487,268.793818129224,239.434581624114,253.802899466281,252.367204116249,225.878980572138,198.692854338401,204.664788609567,237.4173519289,216.922922895532,217.085140420355,211.296002764172,290.925173730059,309.339246918104,251.549284500726,241.011811924894,216.373836661059,186.991790468646,223.503187987465,144.11158538351,230.725721678647,236.559245256928,234.346832717182,225.60367157221,221.325363071687,231.999583341338,83.4538764193559,287.677754751297,296.421344820202,293.868866080788,267.072574829821,312.66548507104,290.002759251844,300.829481582429,240.051054869462,211.255944634122,164.827660660455,235.418444165409,229.974024282448,227.335595621087,253.980871978406,224.777112889252,232.218776824655,250.583335719656,261.037715107807,205.646498477873,346.481377730924,248.962293990229,234.65233018215,197.264103676694,195.722578152406,177.539215861719,323.687589171891,232.126979418844,264.65512174185,267.178765010146,313.076791216862,324.627126922239,330.642617190673,323.141320852515,341.122451845797,323.338446887211,312.052982262702,314.453700939501,252.810813451671,279.606630238062,164.362499493807,189.82308365273,215.884515855357,236.75372832946,178.8533572464,184.842829755904,173.771042099276,160.823980629186,196.561620696328,186.239281029497,228.779648392232,194.042663937472,240.176970660821,234.670444023942,206.048647152521,209.839705980322,268.400401225689,277.621617388441,276.783166156124,155.273206397847,260.782021925075,272.200702904684,273.454984980323,198.108999102465,190.766164444758,273.477365646052,134.657663153632,238.877109952432,272.641849292473,239.205193996199,221.741369355297,289.173633511272,277.250940552247,271.246478742731,266.90465091097,302.32257687857,86.1528833993145,221.838831257698,282.148311724857,209.940098317637,243.203452449935,108.693986833912,228.33557194599,240.005736288708,283.158463102571,330.432050894726,341.820191315232,259.586828890783,228.836783454013,284.456179258191,238.139843526588,162.247139259196,275.956472488532,235.07464261011,270.01362090504,286.69679156114,313.713252619753,261.722230148262,642.178508516785,641.957311808619,617.753882905774,189.979452985008,247.058410986867,255.775889645576,256.404679110956,234.178891536205,240.853907812034,226.706966272884,238.372566311869,187.679010402549,218.271615023379,235.487599659945,157.834022831573,290.959198601583,185.313509311949,259.786787627648,169.199368755828,242.114127828285,296.327027580529,300.772128989525,341.107447416837,254.62966335061,192.116014173996,476.228758786665,172.113707781349,218.774338761082,282.317948330749,288.949086807315,295.041811850178,297.603933011443,331.415298979751,380.643516304517,357.181302791984,354.908171681679,444.70030981549,413.807130895057,430.691384539082,206.551379473458,163.603647636686,206.521297915013,180.979616440477,230.281996086371,245.300995414695,261.17421620512,230.660375889075,220.190153671525,230.418751787763,203.924079772679,218.846086133849,184.054758290089,195.248518134633,197.913201116102,211.957065072787,186.432978134827,196.663805499145,207.62188501248,319.872605254432,274.529112899909,244.831990651428,258.908653677733,242.732042323204,203.330920345716,250.916555688024,274.232661184968,263.47467107488,248.401359163813,269.448495783325,253.513802822886,247.962711780249,249.95419498861,250.533515584385,270.534816648786,239.417017402071,238.821614934067,274.449209935002,258.628502676136,284.238610227509,252.548072164737,258.703266092843,260.170085771868,286.374844603851,256.636105735455,248.599115134098,253.599201826081,258.571032762521,254.197449060956,236.914131193976,231.485533582574,270.092488491995,272.378966804928,239.204197616615,130.401121683608,242.821009566334,237.002772615273,262.830168262591,199.194051464922,211.695333921445
|short_description=p1@Rbm39
}}
}}

Latest revision as of 23:53, 25 September 2015

Short description:p1@Rbm39
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rbm39_5end
Coexpression cluster:MCL_coexpression_mm9:298
Association with transcript: 0bp_to_ENSMUST00000029149, ENSMUST00000126992, ENSMUST00000132929, ENSMUST00000137340, ENSMUST00000137566, ENSMUST00000142071, ENSMUST00000146288, ENSMUST00000146549, ENSMUST00000147098, ENSMUST00000152919, ENSMUST00000153514, ENSMUST00000155837_5end
EntrezGene:Rbm39
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rbm39

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7259.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5238.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6214.30
CD326+ enterocyte, pool1.CNhs13542.11848-124I3266.47
CD326+ enterocyte, pool2.CNhs13197.11849-124I4273.99
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7213.21
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8196.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9463.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7523.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2563.63
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6305.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1311.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4457.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8457.65
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1245.84
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3258.36
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5225.26
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2348.27
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4363.08
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6342.91
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3168.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2307.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9239.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1176.31
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2161.96
GP2+ M cell, pool1.CNhs13228.11845-124H9188.92
GP2+ M cell, pool2.CNhs13231.11846-124I1187.81
GP2+ M cell, pool3.CNhs13240.11847-124I2204.48
Ileum epithelium, pool1.CNhs13199.10252-104B9160.76
Ileum epithelium, pool2.CNhs13232.10253-104C1185.75
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8169.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3104.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6108.25
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9110.94
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5210.86
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6194.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7229.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8498.05
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1362.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3437.67
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9725.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2596.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4487.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8220.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9207.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3189.05
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B772.76
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C252.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B829.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C359.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C446.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C447.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2495.63
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9430.87
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1451.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1153.33
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1195.13
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5156.25
Mouse Granule cells, donor1.CNhs12131.11713-123C392.86
Mouse Granule cells, donor2.CNhs12357.11731-123E383.58
Mouse Granule cells, donor3.CNhs12108.11636-122C777.33
Mouse Meningeal cells, donor1.CNhs12132.11716-123C645.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D148.02
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C751.29
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E776.14
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D271.05
Mouse Microglia, donor1.CNhs12629.11718-123C838.95
Mouse Microglia, donor2.CNhs12634.11736-123E852.64
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5161.65
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F589.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9115.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F173.98
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D589.45
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2149.93
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2107.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D673.54
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3183.89
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3141.86
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7180.18
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D488.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F485.54
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8114.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E490.18
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5175.02
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6166.86
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6188.56
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6184.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1148.75
Mouse Schwann, donor1.CNhs12507.11728-123D9167.43
Mouse Schwann, donor2.CNhs12573.11746-123F9182.43
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3456.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7160.04
Mouse hepatocyte, donor1.CNhs13078.11714-123C4195.83
Mouse hepatocyte, donor3.CNhs12615.11637-122C8148.96
Mouse hepatocyte, donor6.CNhs13090.11822-124F4166.99
Mouse hepatocyte, donor8.CNhs13091.11824-124F6181.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7159.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7219.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3147.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8148.76
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6211.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1170.67
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I871.35
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1158.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2157.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3157.22
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6206.44
accessory axillary lymph node, adult.CNhs10475.1063-29H9564.23
adrenal gland, adult.CNhs10508.49-24D7225.34
adrenal gland, embryo E14.CNhs11038.406-44C5180.08
adrenal gland, embryo E16.CNhs11004.1254-43D6199.12
adrenal gland, embryo E17.CNhs11043.1263-45I1194.87
adrenal gland, embryo E18.CNhs11026.1262-18F5217.94
adrenal gland, neonate N00.CNhs11191.1311-23C1268.57
adrenal gland, neonate N25.CNhs11223.1377-27I3180.96
amnion, adult pregnant day17.5.CNhs10488.583-22A8297.87
aorta, adult.CNhs10498.46-23H1263.46
bone (os femoris), adult.CNhs10483.56-12G2261.84
bone (os femoris), neonate N02.CNhs11227.1985-43F5212.56
bone (os femoris), neonate N16.CNhs11225.1525-43A6223.71
bone (os femoris), neonate N20.CNhs11195.1350-25C3252.14
cecum, adult.CNhs10467.37-13H4221.81
cerebellum, adult.CNhs10494.15-8B2270.24
cerebellum, neonate N30.CNhs11135.1395-42I2274.38
colon, adult.CNhs10468.36-18H7213.82
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7552.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1410.33
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4447.41
corpora quadrigemina, adult.CNhs10501.16-22A4204.16
corpus striatum, adult.CNhs10487.19-21D8254.37
corpus striatum, neonate N00.CNhs11226.630-43F1191.87
cortex, adult.CNhs10473.12-14D5207.37
cortex, neonate N30.CNhs11107.1392-42F2219.66
diencephalon, adult.CNhs10482.20-12F2195.11
diencephalon, neonate N30.CNhs11201.1388-42B2216.59
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1257.76
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2245.83
epididymis, adult.CNhs10490.58-23B2183.48
eyeball, adult.CNhs10484.31-12G4219.28
eyeball, embryo E12.CNhs11016.345-16C6297.06
eyeball, embryo E14.CNhs10521.399-16E2253.58
eyeball, embryo E15.CNhs10593.426-16C9274.41
eyeball, embryo E17.CNhs11023.1261-18D4283.78
eyeball, neonate N00.CNhs11207.633-15C6343.18
eyeball, neonate N01.CNhs11140.1532-43E7314.78
eyeball, neonate N02.CNhs11205.1551-44G8256.56
eyeball, neonate N16.CNhs11188.777-19A2293.89
forelimb, embryo E11.CNhs10596.335-25E2170.73
forelimb, embryo E12.CNhs10600.359-14H2320.35
forelimb, embryo E13.CNhs10589.384-1E2302.64
forelimb, embryo E14.CNhs10577.413-26A8239.80
forelimb, embryo E15.CNhs11007.437-20E7344.50
forelimb, embryo E17.CNhs10598.1517-43C4253.18
forelimb, embryo E18.CNhs11008.1520-43B5288.09
gonad, embryo E13.CNhs11044.1564-45I6295.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8452.93
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2392.71
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5374.24
heart, embryo E11.CNhs10586.331-24E9203.19
heart, embryo E12.CNhs11015.353-12F5232.18
heart, embryo E13.CNhs11013.376-3I9232.46
heart, embryo E14.CNhs10597.403-26D4220.88
heart, embryo E15.CNhs11017.431-16C8237.10
heart, embryo E16.CNhs11021.457-17C6239.27
heart, embryo E17.CNhs11025.479-18E5249.74
heart, embryo E18.CNhs11030.1283-20G3220.52
heart, neonate N00.CNhs11213.639-21E3268.79
heart, neonate N03.CNhs11221.1349-25I2239.43
heart, neonate N10.CNhs11118.749-24G1253.80
heart, neonate N16.CNhs11209.782-15G1252.37
heart, neonate N20.CNhs11127.821-26I6225.88
heart, neonate N25.CNhs11196.1351-25D3198.69
heart, neonate N30.CNhs11202.1390-42D2204.66
hippocampus, adult.CNhs10478.13-16E8237.42
hippocampus, neonate N00.CNhs11228.627-43G1216.92
intestinal mucosa, adult.CNhs10506.860-29I3217.09
intestine, adult.CNhs10496.178-9A3211.30
intestine, embryo E12.CNhs11019.1251-16I5290.93
intestine, embryo E13.CNhs11010.381-16D5309.34
intestine, embryo E15.CNhs10602.976-16D8251.55
intestine, embryo E16.CNhs10585.463-22H4241.01
intestine, embryo E17.CNhs10582.482-18D3216.37
intestine, embryo E18.CNhs10526.1289-20F7186.99
intestine, neonate N00.CNhs11126.644-26D1223.50
intestine, neonate N01.CNhs11192.1322-23E9144.11
intestine, neonate N06.CNhs11102.688-20B8230.73
intestine, neonate N07.CNhs11095.720-20F2236.56
intestine, neonate N10.CNhs11098.755-23A5234.35
intestine, neonate N20.CNhs11187.827-18D1225.60
intestine, neonate N25.CNhs11121.1352-25E3221.33
intestine, neonate N30.CNhs11131.1384-42G1232.00
kidney, embryo E14.CNhs10606.411-4I983.45
kidney, embryo E15.CNhs10997.434-16F8287.68
kidney, embryo E16.CNhs10584.464-22A5296.42
kidney, embryo E17.CNhs11028.483-18I2293.87
kidney, embryo E18.CNhs11001.1288-20C7267.07
kidney, neonate N00.CNhs11214.646-21G7312.67
kidney, neonate N10.CNhs11206.758-6D5290.00
kidney, neonate N20.CNhs11113.832-19I1300.83
kidney, neonate N25.CNhs11122.1353-25F3240.05
kidney, neonate N30.CNhs11203.1385-42H1211.26
liver, adult pregnant day01.CNhs10466.508-5B2164.83
liver, embryo E12.CNhs10601.355-15F8235.42
liver, embryo E13.CNhs10524.378-3H6229.97
liver, embryo E14.CNhs10594.409-16E1227.34
liver, embryo E15.CNhs10520.433-16D7253.98
liver, embryo E16.CNhs10523.462-17F5224.78
liver, embryo E17.CNhs10510.481-18A3232.22
liver, embryo E18.CNhs10579.499-43G4250.58
liver, neonate N00.CNhs11117.641-24F4261.04
liver, neonate N03.CNhs11123.1345-25G2205.65
liver, neonate N06.CNhs11101.684-20A8346.48
liver, neonate N07.CNhs11103.716-20H2248.96
liver, neonate N10.CNhs11115.751-24B9234.65
liver, neonate N20.CNhs11220.823-25A3197.26
liver, neonate N25.CNhs11198.1368-26H1195.72
liver, neonate N30.CNhs11106.1382-42D1177.54
lung, adult.CNhs10474.28-22B1323.69
lung, embryo E12.CNhs10522.354-16G2232.13
lung, embryo E14.CNhs10604.404-26F8264.66
lung, embryo E15.CNhs11020.432-17C5267.18
lung, embryo E16.CNhs10998.458-17B6313.08
lung, embryo E17.CNhs10605.480-44A6324.63
lung, embryo E18.CNhs10583.1287-20I6330.64
lung, neonate N00.CNhs11224.640-42C6323.14
lung, neonate N06.CNhs11212.683-20E5341.12
lung, neonate N07.CNhs11111.715-19A3323.34
lung, neonate N10.CNhs11219.750-23E6312.05
lung, neonate N20.CNhs11109.822-18A4314.45
lung, neonate N25.CNhs11119.1359-25C7252.81
lung, neonate N30.CNhs11133.1394-42H2279.61
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1164.36
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1189.82
mammary gland, adult lactating day02.CNhs10480.595-22B6215.88
mammary gland, adult pregnant day19.CNhs10476.588-5H2236.75
medulla oblongata, adult.CNhs10477.17-12C2178.85
medulla oblongata, neonate N30.CNhs11200.1396-42A3184.84
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7173.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2160.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1196.56
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2186.24
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3228.78
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7194.04
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8240.18
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9234.67
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4206.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5209.84
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6268.40
olfactory brain, adult.CNhs10489.18-22I9277.62
ovary, adult.CNhs10507.91-2I7276.78
ovary, embryo E18.CNhs11040.505-44H7155.27
ovary, neonate N00.CNhs11217.1299-22I4260.78
oviduct, adult pregnant day01.CNhs10500.988-6G6272.20
pancreas, adult.CNhs10486.34-16E4273.45
pancreas, embryo E14.CNhs11012.405-44F4198.11
pancreas, embryo E15.CNhs11042.1556-45F2190.77
pancreas, embryo E16.CNhs11003.460-26E5273.48
pancreas, embryo E17.CNhs10599.1558-45G3134.66
pancreas, embryo E18.CNhs10580.1535-43I7238.88
pancreas, neonate N00.CNhs11105.645-26G9272.64
pancreas, neonate N01.CNhs11138.1531-43D7239.21
pancreas, neonate N02.CNhs11139.1539-43D8221.74
pancreas, neonate N16.CNhs11136.787-43B6289.17
pancreas, neonate N25.CNhs11094.1555-45E2277.25
pancreas, neonate N30.CNhs11182.1548-44H5271.25
pituitary gland, adult.CNhs10493.21-1G8266.90
pituitary gland, embryo E12.CNhs11018.346-16E6302.32
pituitary gland, embryo E13.CNhs11009.370-44C786.15
pituitary gland, embryo E14.CNhs11037.398-44A5221.84
pituitary gland, embryo E15.CNhs10592.427-16B9282.15
pituitary gland, embryo E16.CNhs11036.449-43F6209.94
pituitary gland, embryo E17.CNhs11039.1265-44F5243.20
pituitary gland, neonate N00.CNhs11190.1308-22E9108.69
placenta, adult pregnant day10.CNhs10472.539-13I7228.34
placenta, adult pregnant day17.CNhs10464.577-18G3240.01
prostate, adult.CNhs10470.859-1F8283.16
skin, adult.CNhs10492.30-1C3330.43
skin, neonate N00.CNhs11124.650-25G4341.82
skin, neonate N03.CNhs11215.662-22H3259.59
skin, neonate N06.CNhs11097.693-20I5228.84
skin, neonate N10.CNhs11108.762-6C4284.46
small intestine, neonate N16.CNhs11114.790-21I1238.14
spinal cord, adult.CNhs10505.24-13C9162.25
spleen, adult.CNhs10465.25-2G2275.96
spleen, embryo E16.CNhs11035.461-43C1235.07
spleen, embryo E18.CNhs11011.1271-21F2270.01
spleen, neonate N10.CNhs11116.752-24D1286.70
spleen, neonate N20.CNhs11112.824-19H1313.71
spleen, neonate N25.CNhs11099.1354-25G3261.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6642.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9641.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3617.75
stomach, adult.CNhs10503.33-1H6189.98
stomach, embryo E12.CNhs10588.356-43E3247.06
stomach, embryo E15.CNhs10603.1252-16G8255.78
stomach, embryo E16.CNhs11022.459-17D4256.40
stomach, embryo E17.CNhs11006.1035-18D5234.18
stomach, embryo E18.CNhs10999.1286-20C6240.85
stomach, neonate N03.CNhs11193.1340-24B8226.71
stomach, neonate N07.CNhs11210.718-18A9238.37
stomach, neonate N25.CNhs11104.1355-25E4187.68
stomach, neonate N30.CNhs11134.1386-42I1218.27
submandibular gland, adult.CNhs10469.59-29C1235.49
testis, adult.CNhs10504.57-7G5157.83
testis, embryo E13.CNhs11031.389-23F5290.96
testis, embryo E15.CNhs11034.443-27C5185.31
testis, embryo E16.CNhs11033.470-26G5259.79
testis, embryo E17.CNhs11029.486-18I5169.20
testis, embryo E18.CNhs11027.503-18G5242.11
testis, neonate N00.CNhs11189.1300-22B7296.33
testis, neonate N07.CNhs11222.726-26I4300.77
testis, neonate N10.CNhs11204.763-44D9341.11
testis, neonate N20.CNhs11110.839-18H3254.63
testis, neonate N30.CNhs11130.1391-42E2192.12
thymus, adult.CNhs10471.38-12B5476.23
thymus, embryo E14.CNhs11041.402-44I4172.11
thymus, embryo E15.CNhs11005.430-45I2218.77
thymus, embryo E16.CNhs11002.456-26C5282.32
thymus, embryo E17.CNhs10581.478-18C1288.95
thymus, embryo E18.CNhs10595.1273-19G4295.04
thymus, neonate N02.CNhs11181.1541-43F8297.60
thymus, neonate N03.CNhs11137.2104-43C7331.42
thymus, neonate N06.CNhs11197.681-26C4380.64
thymus, neonate N07.CNhs11211.713-19D3357.18
thymus, neonate N10.CNhs11194.748-24E4354.91
thymus, neonate N20.CNhs11186.820-7A2444.70
thymus, neonate N25.CNhs11125.1362-25G7413.81
thymus, neonate N30.CNhs11132.1393-42G2430.69
tongue, adult.CNhs10499.32-1B4206.55
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3163.60
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7206.52
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5180.98
urinary bladder, adult.CNhs10481.879-12E4230.28
uterus, adult pregnant day19.CNhs10497.590-15F5245.30
uterus, adult.CNhs10509.92-27E5261.17
vagina, adult.CNhs10502.89-27D5230.66
vesicular gland, adult.CNhs10491.51-27F8220.19
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1230.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2203.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3218.85
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7184.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4195.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5197.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6211.96
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7186.43
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8196.66
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9207.62
whole body, embryo E11.CNhs11014.324-5I8319.87
whole body, embryo E12.CNhs10587.857-27C9274.53
whole body, embryo E13.CNhs10512.372-23H2244.83
whole body, embryo E14.5.CNhs10578.420-27D2258.91
whole body, embryo E14.CNhs10519.395-14B1242.73
whole body, embryo E16.CNhs10514.453-14F2203.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5250.92
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5274.23
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5263.47
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5248.40
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5269.45
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5253.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5247.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5249.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5250.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5270.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5239.42
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5238.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5274.45
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5258.63
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5284.24
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5252.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5258.70
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5260.17
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5286.37
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5256.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5248.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5253.60
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5258.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5254.20
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5236.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5231.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5270.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5272.38
whole body, embryo E17.5.CNhs10513.490-9F9239.20
whole body, embryo E17.CNhs10517.475-3I5130.40
whole body, embryo E18.CNhs10516.493-3B3242.82
whole body, neonate N00.CNhs10525.657-19C2237.00
whole body, neonate N01.CNhs10576.659-23C6262.83
whole body, neonate N06.CNhs10515.692-21D1199.19
whole body, neonate N10.CNhs10518.761-6B4211.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphocyte2.96e-0713
common lymphoid progenitor2.96e-0713
lymphoid lineage restricted progenitor cell5.35e-0712

Uber anatomy
Ontology termp-valuen
anterior region of body4.75e-0743
respiratory tract7.88e-0741
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