FFCP PHASE1:Mm9::chr2:19367259..19367278,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:19367259..19367278,+
|short_description=p1@Ptf1a
|description=CAGE_peak_1_at_Ptf1a_5end
|association_with_transcript=-11bp_to_ENSMUST00000028068,NM_018809,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19213 | |EntrezGene=19213 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=85 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QX98,A2ATA7 | |UniProt=Q9QX98,A2ATA7 | ||
|association_with_transcript=-11bp_to_ENSMUST00000028068,NM_018809,uc012brh.1_5end | |||
|cluster_id=chr2:19367259..19367278,+ | |||
|description=CAGE_peak_1_at_Ptf1a_5end | |||
|id=chr2:19367259..19367278,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.52e-19!59;UBERON:0001045!1.95e-14!13;UBERON:0000160!3.08e-14!43;UBERON:0001264!1.12e-13!12;UBERON:0003922!1.12e-13!12;UBERON:0002114!1.12e-13!12;UBERON:0003923!1.12e-13!12;UBERON:0003924!1.12e-13!12;UBERON:0003921!1.12e-13!12;UBERON:0002075!3.62e-11!19;UBERON:0002108!1.13e-10!16;UBERON:0004921!2.47e-07!126;UBERON:0004185!2.47e-07!126;UBERON:0001007!5.52e-07!128;UBERON:0001555!5.52e-07!128;UBERON:0007026!5.52e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.29e-23,12;UBERON:0002075,2.78e-18,19;UBERON:0005409,1.53e-16,47;UBERON:0000970,3.58e-09,9;UBERON:0000019,3.58e-09,9;UBERON:0000047,3.58e-09,9;UBERON:0010312,3.58e-09,9;UBERON:0004088,3.58e-09,9;UBERON:0002104,3.58e-09,9;UBERON:0001456,3.58e-09,9;UBERON:0003072,3.58e-09,9;UBERON:0004128,3.58e-09,9;UBERON:0003071,3.58e-09,9;UBERON:0000945,6.61e-09,16;UBERON:0010039,6.61e-09,16;UBERON:0000160,7.38e-09,31;UBERON:0002323,1.53e-07,37;UBERON:0004458,1.53e-07,37;UBERON:0001444,2.77e-07,11;UBERON:0003886,3.00e-07,38;UBERON:0002553,5.67e-07,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.383381884072945,0,0,0.127687338085188,0,0.791317726381163,0.0914876436024097,0.52091337055676,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0,0,5.59175283654366,0,0,9.19645398750929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04096354370163,20.2313851901456,27.1893816006077,24.7155901250573,18.0977087742532,16.7828973573153,12.087522468205,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5121954981413,0,0.853153002140936,0.928946687441754,5.15469845288373,18.1515172161008,6.89371935919098,10.2721838100782,6.64340686162316,1.81168850196412,6.78605063760728,5.57078121715222,6.43381487493096,1.79763881730844,0,4.18196673834171,0,0.913988100877831,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0,0,0.296452627087149,0.166845105716094,0,0,0.405720242777006,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0.505157755894224,0.717589654087649,0.482443521363367,0,0,0,0.169745085775188,0,0,0,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,553.547226877645,68.2213587595498,148.743190026658,387.960649057882,370.308573672489,305.28310190832,65.8992147578964,95.9729045820615,106.949213515416,179.508878507543,213.999775407247,246.493948363167,0,0.18006109403131,1.03486947026204,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,17.5428837768739,4.07427960213366,0,0.820165366326151,0,0,0,0,19.0934123603023,0,28.6680448648857,12.3126088536853,3.97267762427491,8.29777742235475,3.10187996685088,1.98368293740806,2.87931536182433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52876981786201,0.798049746802062,0.512200817262403,0.729320151204882,0.838452650511929,1.65459157605013,0.222246727801615,0.206035057238894,0.320919209591815,1.01078884705519,0,0,0.280924522409647,0.384150914429216,0.0574354689556133,0,0.347652977834566,0,0,0.294397840268795,0.685738504770831,0.532427418478012,0,0.581385666529314,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,1.40358965067245,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.383381884072945,0,0,0.127687338085188,0,0.791317726381163,0.0914876436024097,0.52091337055676,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0,0,5.59175283654366,0,0,9.19645398750929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04096354370163,20.2313851901456,27.1893816006077,24.7155901250573,18.0977087742532,16.7828973573153,12.087522468205,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5121954981413,0,0.853153002140936,0.928946687441754,5.15469845288373,18.1515172161008,6.89371935919098,10.2721838100782,6.64340686162316,1.81168850196412,6.78605063760728,5.57078121715222,6.43381487493096,1.79763881730844,0,4.18196673834171,0,0.913988100877831,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0,0,0.296452627087149,0.166845105716094,0,0,0.405720242777006,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0.505157755894224,0.717589654087649,0.482443521363367,0,0,0,0.169745085775188,0,0,0,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,553.547226877645,68.2213587595498,148.743190026658,387.960649057882,370.308573672489,305.28310190832,65.8992147578964,95.9729045820615,106.949213515416,179.508878507543,213.999775407247,246.493948363167,0,0.18006109403131,1.03486947026204,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,17.5428837768739,4.07427960213366,0,0.820165366326151,0,0,0,0,19.0934123603023,0,28.6680448648857,12.3126088536853,3.97267762427491,8.29777742235475,3.10187996685088,1.98368293740806,2.87931536182433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52876981786201,0.798049746802062,0.512200817262403,0.729320151204882,0.838452650511929,1.65459157605013,0.222246727801615,0.206035057238894,0.320919209591815,1.01078884705519,0,0,0.280924522409647,0.384150914429216,0.0574354689556133,0,0.347652977834566,0,0,0.294397840268795,0.685738504770831,0.532427418478012,0,0.581385666529314,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,1.40358965067245,0,0,0,0 | ||
|short_description=p1@Ptf1a | |||
}} | }} |
Latest revision as of 08:40, 26 September 2015
Short description: | p1@Ptf1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ptf1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:85 |
Association with transcript: | -11bp_to_ENSMUST00000028068, NM_018809, uc012brh.1_5end |
EntrezGene: | Ptf1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pancreas | 2.29e-23 | 12 |
viscus | 2.78e-18 | 19 |
gastrointestinal system | 1.53e-16 | 47 |
eye | 3.58e-09 | 9 |
camera-type eye | 3.58e-09 | 9 |
simple eye | 3.58e-09 | 9 |
immature eye | 3.58e-09 | 9 |
ocular region | 3.58e-09 | 9 |
visual system | 3.58e-09 | 9 |
face | 3.58e-09 | 9 |
optic cup | 3.58e-09 | 9 |
optic vesicle | 3.58e-09 | 9 |
eye primordium | 3.58e-09 | 9 |
stomach | 6.61e-09 | 16 |
food storage organ | 6.61e-09 | 16 |
intestine | 7.38e-09 | 31 |
body cavity | 1.53e-07 | 37 |
body cavity or lining | 1.53e-07 | 37 |
subdivision of head | 2.77e-07 | 11 |
body cavity precursor | 3.00e-07 | 38 |
anatomical cavity | 5.67e-07 | 39 |