FFCP PHASE1:Mm9::chr2:29108357..29108372,-: Difference between revisions
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|id=chr2:29108357..29108372,-
|short_description=p4@6530402F18Rik
|description=CAGE_peak_4_at_6530402F18Rik_5end
|association_with_transcript=140bp_to_ENSMUST000001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=76220 | |EntrezGene=76220 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=53 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=140bp_to_ENSMUST00000155949,NR_029460_5end | |||
|cluster_id=chr2:29108357..29108372,- | |||
|description=CAGE_peak_4_at_6530402F18Rik_5end | |||
|id=chr2:29108357..29108372,- | |||
|ontology_enrichment_celltype=CL:0000117!6.50e-08!23;CL:0000337!6.50e-08!23;CL:0000540!2.05e-07!33;CL:0000047!2.05e-07!33;CL:0000031!2.05e-07!33;CL:0000404!2.05e-07!33 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.94e-14!49;UBERON:0002346!9.59e-14!71;UBERON:0003075!9.59e-14!71;UBERON:0007284!9.59e-14!71;UBERON:0000033!8.89e-12!63;UBERON:0002020!6.66e-11!34;UBERON:0002791!1.11e-09!29;UBERON:0003528!1.11e-09!29;UBERON:0001893!1.11e-09!29;UBERON:0004121!2.01e-09!102;UBERON:0000924!2.01e-09!102;UBERON:0006601!2.01e-09!102;UBERON:0000970!6.96e-09!9;UBERON:0000019!6.96e-09!9;UBERON:0000047!6.96e-09!9;UBERON:0004088!6.96e-09!9;UBERON:0002104!6.96e-09!9;UBERON:0001456!6.96e-09!9;UBERON:0003072!6.96e-09!9;UBERON:0003071!6.96e-09!9;UBERON:0004128!6.96e-09!9;UBERON:0002780!8.43e-09!39;UBERON:0001890!8.43e-09!39;UBERON:0006240!8.43e-09!39;UBERON:0001049!1.02e-08!52;UBERON:0005068!1.02e-08!52;UBERON:0006241!1.02e-08!52;UBERON:0007135!1.02e-08!52;UBERON:0000020!1.35e-08!12;UBERON:0001032!1.35e-08!12;UBERON:0004456!1.35e-08!12;UBERON:0003080!2.45e-08!40;UBERON:0005085!1.37e-07!13;UBERON:0001017!1.56e-07!73;UBERON:0005743!1.56e-07!73;UBERON:0000073!2.37e-07!75;UBERON:0001016!2.37e-07!75;UBERON:0000956!5.23e-07!21;UBERON:0001869!5.23e-07!21;UBERON:0000203!5.23e-07!21;UBERON:0002616!8.23e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.21e-27,9;UBERON:0000019,1.21e-27,9;UBERON:0000047,1.21e-27,9;UBERON:0010312,1.21e-27,9;UBERON:0004088,1.21e-27,9;UBERON:0002104,1.21e-27,9;UBERON:0001456,1.21e-27,9;UBERON:0003072,1.21e-27,9;UBERON:0004128,1.21e-27,9;UBERON:0003071,1.21e-27,9;UBERON:0001444,1.67e-22,11;UBERON:0000020,1.42e-20,12;UBERON:0001032,1.42e-20,12;UBERON:0004456,1.42e-20,12;UBERON:0000033,6.12e-19,13;UBERON:0005085,6.12e-19,13;UBERON:0003056,4.29e-13,49;UBERON:0002346,2.34e-11,64;UBERON:0003075,2.34e-11,64;UBERON:0007284,2.34e-11,64;UBERON:0010371,1.04e-09,73;UBERON:0004121,2.58e-08,95;UBERON:0000924,2.58e-08,95;UBERON:0006601,2.58e-08,95;UBERON:0010314,2.76e-07,92 | |||
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| ||
|short_description=p4@6530402F18Rik | |||
}} | }} |
Latest revision as of 12:27, 26 September 2015
Short description: | p4@6530402F18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_6530402F18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | 140bp_to_ENSMUST00000155949, NR_029460_5end |
EntrezGene: | 6530402F18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.21e-27 | 9 |
camera-type eye | 1.21e-27 | 9 |
simple eye | 1.21e-27 | 9 |
immature eye | 1.21e-27 | 9 |
ocular region | 1.21e-27 | 9 |
visual system | 1.21e-27 | 9 |
face | 1.21e-27 | 9 |
optic cup | 1.21e-27 | 9 |
optic vesicle | 1.21e-27 | 9 |
eye primordium | 1.21e-27 | 9 |
subdivision of head | 1.67e-22 | 11 |
sense organ | 1.42e-20 | 12 |
sensory system | 1.42e-20 | 12 |
entire sense organ system | 1.42e-20 | 12 |
head | 6.12e-19 | 13 |
ectodermal placode | 6.12e-19 | 13 |
pre-chordal neural plate | 4.29e-13 | 49 |
neurectoderm | 2.34e-11 | 64 |
neural plate | 2.34e-11 | 64 |
presumptive neural plate | 2.34e-11 | 64 |
ecto-epithelium | 1.04e-09 | 73 |
ectoderm-derived structure | 2.58e-08 | 95 |
ectoderm | 2.58e-08 | 95 |
presumptive ectoderm | 2.58e-08 | 95 |
structure with developmental contribution from neural crest | 2.76e-07 | 92 |