FFCP PHASE1:Mm9::chr2:90730407..90730420,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:90730407..90730420,+
|short_description=p@chr2:90730407..90730420,+
|description=CAGE_peak_at_chr2:90730407..90730420,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=666 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:90730407..90730420,+ | |||
|description=CAGE_peak_at_chr2:90730407..90730420,+ | |||
|id=chr2:90730407..90730420,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.49e-21!23;CL:0000337!2.49e-21!23;CL:0000540!3.47e-14!33;CL:0000047!3.47e-14!33;CL:0000031!3.47e-14!33;CL:0000404!3.47e-14!33;CL:0002610!1.77e-12!3;CL:0002319!2.25e-12!43;CL:0000221!4.90e-12!44;CL:0000133!4.90e-12!44;CL:0000393!1.17e-11!39;CL:0000211!1.17e-11!39;CL:0000055!2.71e-10!50;CL:0002611!3.49e-08!2;CL:0002321!8.02e-08!70;CL:0000220!8.02e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.15e-39,3;CL:0000117,2.24e-12,23;CL:0000337,2.24e-12,23;CL:0002612,4.56e-11,3;CL:0000540,6.05e-09,33;CL:0000047,6.05e-09,33;CL:0000031,6.05e-09,33;CL:0000404,6.05e-09,33;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004684!1.77e-12!3;UBERON:0002275!1.77e-12!3;UBERON:0001948!2.54e-12!5;UBERON:0002315!2.54e-12!5;UBERON:0001017!1.58e-11!73;UBERON:0005743!1.58e-11!73;UBERON:0000073!3.92e-11!75;UBERON:0001016!3.92e-11!75;UBERON:0002240!2.78e-10!6;UBERON:0005174!2.78e-10!6;UBERON:0001137!2.78e-10!6;UBERON:0002256!3.49e-08!2;UBERON:0001049!6.27e-08!52;UBERON:0005068!6.27e-08!52;UBERON:0006241!6.27e-08!52;UBERON:0007135!6.27e-08!52;UBERON:0003076!9.49e-08!12;UBERON:0003057!9.49e-08!12;UBERON:0002020!2.36e-07!34;UBERON:0004121!2.59e-07!102;UBERON:0000924!2.59e-07!102;UBERON:0006601!2.59e-07!102;UBERON:0002616!3.69e-07!49;UBERON:0000955!5.62e-07!50;UBERON:0006238!5.62e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.15e-39,3;UBERON:0002275,4.15e-39,3;UBERON:0002257,4.56e-11,3;UBERON:0001948,3.64e-07,5;UBERON:0002315,3.64e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0,0,0,1.10115880999389,1.0214987046815,0.614426133024974,0,0.457438218012048,0.52091337055676,0,0,0,0.589257170947335,2.56269025438385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0.231768651889711,0.192909220463705,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0,0,0,1.10115880999389,1.0214987046815,0.614426133024974,0,0.457438218012048,0.52091337055676,0,0,0,0.589257170947335,2.56269025438385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0.231768651889711,0.192909220463705,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:90730407..90730420,+ | |||
}} | }} |
Latest revision as of 15:01, 5 August 2015
Short description: | p@chr2:90730407..90730420, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:90730407..90730420, + |
Coexpression cluster: | MCL_coexpression_mm9:666 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.15e-39 | 3 |
CNS neuron (sensu Vertebrata) | 2.24e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.24e-12 | 23 |
neuron of the ventral spinal cord | 4.56e-11 | 3 |
neuron | 6.05e-09 | 33 |
neuronal stem cell | 6.05e-09 | 33 |
neuroblast | 6.05e-09 | 33 |
electrically signaling cell | 6.05e-09 | 33 |
electrically responsive cell | 1.01e-07 | 39 |
electrically active cell | 1.01e-07 | 39 |
neural cell | 4.30e-07 | 43 |
ectodermal cell | 5.93e-07 | 44 |
neurectodermal cell | 5.93e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 4.15e-39 | 3 |
reticular formation | 4.15e-39 | 3 |
ventral horn of spinal cord | 4.56e-11 | 3 |
regional part of spinal cord | 3.64e-07 | 5 |
gray matter of spinal cord | 3.64e-07 | 5 |