FFCP PHASE1:Mm9::chr3:102273841..102273855,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:102273841..102273855,+
|short_description=p1@Ngf
|description=CAGE_peak_1_at_Ngf_5end
|association_with_transcript=0bp_to_ENSMUST00000035952,ENSMUST0000010...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18049 | |EntrezGene=18049 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=41 | |||
|TSSclassifier=NA | |||
|UniProt=P01139,Q6LDU8 | |UniProt=P01139,Q6LDU8 | ||
|association_with_transcript=0bp_to_ENSMUST00000035952,ENSMUST00000106925,NM_001112698,NM_013609,uc008qrv.2,uc012cuz.1_5end | |||
|cluster_id=chr3:102273841..102273855,+ | |||
|description=CAGE_peak_1_at_Ngf_5end | |||
|id=chr3:102273841..102273855,+ | |||
|ontology_enrichment_celltype=CL:0000333!3.73e-07!10;CL:0000095!3.73e-07!10;CL:0000243!3.73e-07!10;CL:0000123!3.73e-07!10;CL:0000125!3.73e-07!10;CL:0000030!3.73e-07!10;CL:0000339!3.73e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,2.06e-07,10;CL:0000095,2.06e-07,10;CL:0000243,2.06e-07,10;CL:0000123,2.06e-07,10;CL:0000125,2.06e-07,10;CL:0000030,2.06e-07,10;CL:0000339,2.06e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.94e-07!23;UBERON:0001009!1.94e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,5.25e-08,23;UBERON:0001009,5.25e-08,23 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5968563413623,18.9574861380492,7.15832333430558,53.2026114156667,13.9536100083486,15.378032791413,18.6652703111312,33.3167683468363,5.75010257459886,0,0,0,87.9827271242939,46.1318838301398,42.8007836590277,0.202316460859598,0,0,84.711133017283,68.4756993005577,21.1476433561129,12.8552627133707,15.6305625288142,16.4780060785123,14.9845139075406,0.311068836925433,0,0,0.856952953211411,1.98781686856452,0.734944795289724,0.287536413054709,0,3.30347642998166,3.19218345212969,1.84327839907492,0.131886287730194,0.0914876436024097,0,1.95428099300967,0,1.5279824777681,0,0.569486723196412,0.559198337475902,24.3081080599521,12.6204505378332,50.1465565453903,31.8356834483113,8.83962733820076,0,1.29955283489534,1.34408066129201,51.5431021883529,4.94247935476367,1.81850203222008,2.82671659608272,0.281686839553361,1.28326477414318,0,0,16.8863011988747,21.2822286999083,23.25412447068,32.5424057199321,1.55362730188303,4.00793775475027,1.21439728736295,0.913396434936424,0.691846491768175,1.50722640552623,1.29347577849275,2.76466500925286,0,4.04878199375753,0,3.07357014900077,1.98757366614354,0.484875253135222,0,0,0.209446706813455,1.53274233125155,0,0,0,0.149790639404823,1.83000241127451,0.502617408451458,1.73824320192276,1.53429274398198,2.28566849015516,2.10913641988085,6.31404055871961,2.48813941220186,1.0108910337347,1.47309299120532,1.30120442962704,2.06911893990126,2.88099407688559,1.65775299619287,1.36072998302656,1.2811372028485,2.06143794031403,0.776110112217047,3.44908788692548,6.24050064553804,8.97350733236139,10.5213951565236,9.17555922444473,7.3132954969655,6.37924622864625,0.995171334092466,0,0,0,0,0,1.2604344302271,3.07768156260773,3.34499193970586,4.62801338662135,4.88321283975857,6.70683503499048,3.97002164048376,5.9241545968853,9.35754545250843,9.8903947645944,10.6725990820493,9.22110484222413,13.8232611323183,5.25724871410318,1.44066457330998,0,0.528901133327089,1.91959425481711,2.32236671860439,4.25262622362908,3.42861991859682,2.2237804384487,2.28270751335071,0,4.28217282282428,3.51869292320377,2.78539060857611,3.70431765526328,2.69645822596266,1.72910439899755,1.1948476395262,2.65535061334314,2.39921876480431,0,2.03651327845314,2.13347735884388,3.15611189506434,3.47800954183415,6.6424566590821,4.39596437955849,4.07210640941942,9.48648406678877,0.166845105716094,0.786235980452812,0,0.405720242777006,0.241177159752417,1.01850340712568,1.15078454980324,0.648540907100142,1.92192989231657,1.43768206527355,1.48856379067401,6.55279113540577,8.84026072814891,5.56131981917928,6.75420929908714,0.184753190166605,3.03186258832776,0.651859905768103,0.848725428875941,0,0.837531287209079,0,0.780534591431195,0.788175720530955,0,0.318909537314974,0.491589944147214,0.518054945597687,0.289298117163023,0,0,1.47529281905711,2.20749397043786,0.963303539926752,1.40654023910644,12.622990794004,1.51482556322624,2.2085575359138,3.51394869866975,0.646270193198397,1.19484398976276,1.11399337041197,0.566153061577665,2.42886421004937,3.79932615284705,2.76701444562566,4.17717711348349,4.68402281187286,6.23229612835393,4.72372182125371,7.09371528781903,6.63725691699814,3.15614827001476,4.23252979750651,1.50884063804718,4.42952839321159,3.68922177532713,2.06742634534577,7.27067458955011,8.19943970284859,5.37262488490887,3.16255825724996,7.21948802737308,1.02131881726136,0.720244376125241,1.29358683782755,2.57204442037911,2.30542303734956,1.96205699362278,2.79733335023606,2.43571959291679,0.469343416127421,0.847328283455281,5.29268155331909,2.63818004706368,5.00539722757307,4.34253059482722,2.74556391207214,1.96969079694074,1.7488850197791,0.741701208042039,1.53783792718067,1.03193433981611,2.96311243791539,1.31857919903284,0.546776910884101,0.457556346413045,0,0,0,0.954670618015114,1.26534397432454,3.25311147402958,3.78018692876304,3.3454127362315,1.52853794622324,1.34864346384821,2.0663363931334,1.04702376793612,2.46268449254406,4859.49476765285,0,0.299033092087958,0.496375471371293,3.50012139019286,2.58319646955462,3.8859908862879,0.469428954583016,2.21347454234715,0.209718688851422,0,0,0,1.62180172232131,0.821687657318618,0.389762468933385,0.895133478337407,0.993406773906324,0.721172697119813,1.03382669022204,0.504832249740738,0.228620419965,0.100826185136841,0,0.288635524920988,0.116876902181569,4.0811469050738,0,0.358855426437903,4.36500002546604,3.86379188064381,2.064507229963,2.74727436400898,1.07184189539533,3.00943262421218,5.64751842617067,6.44455331110048,5.15605962095457,5.67115501734169,1.37016503954128,1.5107877947794,4.72515750162264,1.80128481289688,2.71885445390523,2.07104124700728,0.93408612825759,3.99024873401031,4.43907374960749,5.34834777550247,1.25767897576789,1.2869045591501,3.11145418922261,2.26638562962784,0.64183841918363,2.52697211763797,1.77435509923168,2.07488975524684,3.27745276144588,3.13723246783859,2.92920891673628,3.33405583898152,2.6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| ||
|short_description=p1@Ngf | |||
}} | }} |
Latest revision as of 05:02, 27 September 2015
Short description: | p1@Ngf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ngf_5end |
Coexpression cluster: | MCL_coexpression_mm9:41 |
Association with transcript: | 0bp_to_ENSMUST00000035952, ENSMUST00000106925, NM_001112698, NM_013609, uc008qrv.2, uc012cuz.1_5end |
EntrezGene: | Ngf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 2.06e-07 | 10 |
neuron associated cell | 2.06e-07 | 10 |
glial cell (sensu Vertebrata) | 2.06e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.06e-07 | 10 |
glial cell | 2.06e-07 | 10 |
glioblast | 2.06e-07 | 10 |
glioblast (sensu Vertebrata) | 2.06e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 5.25e-08 | 23 |
circulatory system | 5.25e-08 | 23 |