FFCP PHASE1:Mm9::chr3:137976243..137976257,+: Difference between revisions
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|id=chr3:137976243..137976257,+
|short_description=p1@Adh6a
|description=CAGE_peak_1_at_Adh6a_5end
|association_with_transcript=0bp_to_ENSMUST00000013455,ENSMUST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69117 | |EntrezGene=69117 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q4Y1,E9Q5Z6,Q9D932,A1L3C0 | |UniProt=E9Q4Y1,E9Q5Z6,Q9D932,A1L3C0 | ||
|association_with_transcript=0bp_to_ENSMUST00000013455,ENSMUST00000106247,NM_026945,uc008rng.1_5end | |||
|cluster_id=chr3:137976243..137976257,+ | |||
|description=CAGE_peak_1_at_Adh6a_5end | |||
|id=chr3:137976243..137976257,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.42e-10!9;CL:0002251!2.42e-10!9;CL:0000239!3.22e-07!6;CL:0000677!3.22e-07!6;CL:0000212!3.22e-07!6;CL:0000584!3.22e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.50e-16,9;CL:0002251,2.50e-16,9;CL:0000239,4.38e-11,6;CL:0000677,4.38e-11,6;CL:0000584,4.38e-11,6;CL:0000066,7.03e-10,25;CL:0000075,2.25e-09,7;CL:0002076,5.46e-09,15;CL:0000223,1.52e-07,20;CL:0002250,8.02e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.10e-18!59;UBERON:0000160!2.25e-17!43;UBERON:0000344!7.15e-16!15;UBERON:0001242!7.33e-14!13;UBERON:0000060!7.33e-14!13;UBERON:0001262!7.33e-14!13;UBERON:0004786!7.33e-14!13;UBERON:0001007!9.49e-12!128;UBERON:0001555!9.49e-12!128;UBERON:0007026!9.49e-12!128;UBERON:0004119!2.65e-11!130;UBERON:0000925!2.65e-11!130;UBERON:0006595!2.65e-11!130;UBERON:0004921!1.54e-10!126;UBERON:0004185!1.54e-10!126;UBERON:0003350!2.42e-10!9;UBERON:0004808!2.42e-10!9;UBERON:0001277!2.42e-10!9;UBERON:0000485!6.17e-08!11;UBERON:0004923!6.34e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.08e-36,31;UBERON:0005409,6.56e-32,47;UBERON:0000344,9.52e-23,15;UBERON:0001242,2.18e-19,13;UBERON:0001262,2.18e-19,13;UBERON:0004786,2.18e-19,13;UBERON:0003350,2.50e-16,9;UBERON:0004808,2.50e-16,9;UBERON:0001277,2.50e-16,9;UBERON:0001007,3.23e-13,116;UBERON:0001555,3.23e-13,116;UBERON:0007026,3.23e-13,116;UBERON:0000485,5.49e-13,11;UBERON:0004119,7.78e-13,118;UBERON:0000925,7.78e-13,118;UBERON:0006595,7.78e-13,118;UBERON:0004923,8.42e-13,24;UBERON:0004921,1.69e-11,114;UBERON:0000014,1.18e-07,5;UBERON:0001003,1.18e-07,5;UBERON:0002097,1.18e-07,5;UBERON:0002199,1.18e-07,5;UBERON:0007029,1.18e-07,5;UBERON:0007376,1.18e-07,5;UBERON:0002416,1.18e-07,5;UBERON:0007383,1.18e-07,5 | |||
|phase1_expression=0,26.8711063882308,23.6599604482559,321.821920830467,334.59834760416,3.86122325397347,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.8783481689627,21.1056538581796,16.0784949952206,19.3842898271584,12.9282739611533,4.3705386474966,22.6827116783938,0.886922042621219,0,0,0,44.194297821945,104.062887994416,71.0509359793045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,0,0,0,29.8019926066747,0,0,0,0,0,0,0,2.89033160058254,0,0,0,0,0,0,5.59175283654366,0,0,564.560092010987,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62972082950243,0,0,0,0,0,0,0.0937017245597288,4.13925393182425,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2487.06217951905,68.492696765858,0,0,0.902072229254653,1.00841762311671,0.444756087689741,2.09248188723815,559.469763560979,11.1995289212327,11.3100843960121,9.74886713001639,16.7669114922443,488.058938899242,518.947457749141,947.713319417534,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.470996183524124,0.740382983530803,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0,0,0,0,0.315270288212382,0,0,2.45794972073607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0,0.659880491890142,0,0,0,0,0,0,4.13485269069154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,6.10079135883476,1.29171541356724,1.32688434841943,2.14870219205646,3.11867709515616,398.162822836376,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,1.46361807210128,10.2630404960703,20.2296519577231,12.3980183588004,15.9671124610258,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0.302478555410522,0.292373642219257,0.192423683280659,0.233753804363138,1.36038230169127,0,0,0,0.386379188064381,0,0.36630324853453,1.71494703263253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0,0,0.467863216890817,1.28922632428979,0.191288332068843,0,0 | |phase1_expression=0,26.8711063882308,23.6599604482559,321.821920830467,334.59834760416,3.86122325397347,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.8783481689627,21.1056538581796,16.0784949952206,19.3842898271584,12.9282739611533,4.3705386474966,22.6827116783938,0.886922042621219,0,0,0,44.194297821945,104.062887994416,71.0509359793045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,0,0,0,29.8019926066747,0,0,0,0,0,0,0,2.89033160058254,0,0,0,0,0,0,5.59175283654366,0,0,564.560092010987,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62972082950243,0,0,0,0,0,0,0.0937017245597288,4.13925393182425,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2487.06217951905,68.492696765858,0,0,0.902072229254653,1.00841762311671,0.444756087689741,2.09248188723815,559.469763560979,11.1995289212327,11.3100843960121,9.74886713001639,16.7669114922443,488.058938899242,518.947457749141,947.713319417534,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.470996183524124,0.740382983530803,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0,0,0,0,0.315270288212382,0,0,2.45794972073607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0,0.659880491890142,0,0,0,0,0,0,4.13485269069154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,6.10079135883476,1.29171541356724,1.32688434841943,2.14870219205646,3.11867709515616,398.162822836376,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,1.46361807210128,10.2630404960703,20.2296519577231,12.3980183588004,15.9671124610258,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0.302478555410522,0.292373642219257,0.192423683280659,0.233753804363138,1.36038230169127,0,0,0,0.386379188064381,0,0.36630324853453,1.71494703263253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0,0,0.467863216890817,1.28922632428979,0.191288332068843,0,0 | ||
|short_description=p1@Adh6a | |||
}} | }} |
Latest revision as of 16:49, 1 October 2015
Short description: | p1@Adh6a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Adh6a_5end |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | 0bp_to_ENSMUST00000013455, ENSMUST00000106247, NM_026945, uc008rng.1_5end |
EntrezGene: | Adh6a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.50e-16 | 9 |
epithelial cell of alimentary canal | 2.50e-16 | 9 |
brush border epithelial cell | 4.38e-11 | 6 |
gut absorptive cell | 4.38e-11 | 6 |
enterocyte | 4.38e-11 | 6 |
epithelial cell | 7.03e-10 | 25 |
columnar/cuboidal epithelial cell | 2.25e-09 | 7 |
endo-epithelial cell | 5.46e-09 | 15 |
endodermal cell | 1.52e-07 | 20 |
intestinal crypt stem cell | 8.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.08e-36 | 31 |
gastrointestinal system | 6.56e-32 | 47 |
mucosa | 9.52e-23 | 15 |
intestinal mucosa | 2.18e-19 | 13 |
wall of intestine | 2.18e-19 | 13 |
gastrointestinal system mucosa | 2.18e-19 | 13 |
epithelium of mucosa | 2.50e-16 | 9 |
gastrointestinal system epithelium | 2.50e-16 | 9 |
intestinal epithelium | 2.50e-16 | 9 |
digestive system | 3.23e-13 | 116 |
digestive tract | 3.23e-13 | 116 |
primitive gut | 3.23e-13 | 116 |
simple columnar epithelium | 5.49e-13 | 11 |
endoderm-derived structure | 7.78e-13 | 118 |
endoderm | 7.78e-13 | 118 |
presumptive endoderm | 7.78e-13 | 118 |
organ component layer | 8.42e-13 | 24 |
subdivision of digestive tract | 1.69e-11 | 114 |
zone of skin | 1.18e-07 | 5 |
skin epidermis | 1.18e-07 | 5 |
skin of body | 1.18e-07 | 5 |
integument | 1.18e-07 | 5 |
surface | 1.18e-07 | 5 |
outer epithelium | 1.18e-07 | 5 |
integumental system | 1.18e-07 | 5 |
enveloping layer of ectoderm | 1.18e-07 | 5 |