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FFCP PHASE1:Mm9::chr3:84063580..84063621,-: Difference between revisions

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(Created page with "{{FFCP |id=chr3:84063580..84063621,- |short_description=p3@Trim2 |description=CAGE_peak_3_at_Trim2_5end |association_with_transcript=78bp_to_uc008ppx.2_5end |EntrezGene=8...")
 
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{{FFCP
{{FFCP
|id=chr3:84063580..84063621,-
|DHSsupport=NA
|short_description=p3@Trim2
|DPIdataset=NA
|description=CAGE_peak_3_at_Trim2_5end
|association_with_transcript=78bp_to_uc008ppx.2_5end
|EntrezGene=80890
|EntrezGene=80890
|HGNC=
|HGNC=
|MCL_coexpression_id=2382
|TSSclassifier=NA
|UniProt=Q3UHH4
|UniProt=Q3UHH4
|association_with_transcript=78bp_to_uc008ppx.2_5end
|cluster_id=chr3:84063580..84063621,-
|description=CAGE_peak_3_at_Trim2_5end
|id=chr3:84063580..84063621,-
|ontology_enrichment_celltype=CL:0000393!1.28e-10!39;CL:0000211!1.28e-10!39;CL:0000540!6.80e-10!33;CL:0000047!6.80e-10!33;CL:0000031!6.80e-10!33;CL:0000404!6.80e-10!33;CL:0002321!7.60e-10!70;CL:0000220!7.60e-10!70;CL:0000055!3.12e-09!50;CL:0002319!3.88e-08!43;CL:0000221!4.94e-08!44;CL:0000133!4.94e-08!44;CL:0000117!1.50e-07!23;CL:0000337!1.50e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000393,9.74e-11,39;CL:0000211,9.74e-11,39;CL:0000540,3.27e-10,33;CL:0000047,3.27e-10,33;CL:0000031,3.27e-10,33;CL:0000404,3.27e-10,33;CL:0002321,7.99e-10,70;CL:0002319,1.96e-08,43;CL:0000221,2.52e-08,44;CL:0000133,2.52e-08,44;CL:0000117,8.85e-08,23;CL:0000337,8.85e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.77e-19,95;UBERON:0000924,1.77e-19,95;UBERON:0006601,1.77e-19,95;UBERON:0001016,1.34e-17,75;UBERON:0001017,2.86e-17,73;UBERON:0010371,2.73e-15,73;UBERON:0002020,4.70e-14,34;UBERON:0000073,5.17e-14,54;UBERON:0002346,2.35e-13,64;UBERON:0003075,2.35e-13,64;UBERON:0007284,2.35e-13,64;UBERON:0001049,7.22e-13,52;UBERON:0005068,7.22e-13,52;UBERON:0006241,7.22e-13,52;UBERON:0007135,7.22e-13,52;UBERON:0003528,2.43e-12,29;UBERON:0002791,2.43e-12,29;UBERON:0001893,2.43e-12,29;UBERON:0000955,4.20e-11,47;UBERON:0006238,4.20e-11,47;UBERON:0000956,5.68e-11,21;UBERON:0001869,5.68e-11,21;UBERON:0000203,5.68e-11,21;UBERON:0002616,1.56e-10,46;UBERON:0003056,2.14e-09,49;UBERON:0003080,2.14e-09,40;UBERON:0002619,4.45e-09,17;UBERON:0002780,7.01e-09,39;UBERON:0001890,7.01e-09,39;UBERON:0006240,7.01e-09,39;UBERON:0010314,9.17e-09,92;UBERON:0002021,1.46e-07,10;UBERON:0000411,1.46e-07,10;UBERON:0001950,1.46e-07,10;UBERON:0007023,1.88e-07,51
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45634,0,0.179427713218951,0.167884616364078,3.67060228661162,5.81815673898664,4.02933573387983,13.5052078819811,10.5330141847426,14.1187960654267,16.5717085142584,18.9055519435001,13.748254587495,28.773465830367,13.5970901530146,22.2757425076496,28.8205570063501,34.8919654917838,24.8524949640874,0.830298780673413,2.39414924040619,3.24393850932855,2.67417388775123,1.46729213839588,4.22840069435032,1.55572709461131,2.67845574410562,2.24643446714271,2.02157769411038,1.77435509923168,2.45214243801899,2.80924522409647,2.4969809437899,2.5845961030026,2.85776214769844,2.54945517078682,2.70072908649187,2.88460130562315,3.23837624295674,3.08582327146874,1.95223386775271,3.09967046931517,2.47088908274958,2.07040636913727,2.36920902096694,2.19513567447327,2.36762740294059,2.30866993537965,0.561142271657738,2.60997039873183,1.87158516513571,1.63692417267876,2.94379998253335,2.12197272079256,3.2475375131933,3.27504251823572,4.08255002691767,2.86932498103265,3.30887128679273,1.85494268496337
|phase1_expression=3.36312578920067,5.93258192986914,9.55498402718026,8.77146212789807,17.0304548181758,1.6787927191189,3.27057696833736,0.129123323441576,3.09735188733667,1.17032263160997,0,0.239316476986009,0,0.262261207256992,0.333109761815663,0,0,0.157731082679119,0,0,4.59233766815777,0.0992909512008853,0,2.23989391910769,2.75291137280604,4.59385571292016,4.73838195774982,3.01659725760245,7.60093677825496,4.28451220591882,3.10422714917427,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0,0,7.80560271448579,7.90740063512214,9.72797786456912,0,1.74420125104357,6.37089929929968,5.63846707315422,1.39986421625363,1.43752564364972,0.167782606057736,0,0,3.34437266846731,0.85960031981627,5.15672092277442,6.67644320836673,4.23192783417626,5.07065122804943,0.677689064138264,0.889294796111139,0,0.988866362566974,0.7104801149461,0.599200221036809,2.68952813725088,10.3689612308478,8.10035629990144,10.5162480675691,6.85562362569129,5.96345060569357,4.5321595709533,5.271500906003,2.75765635983006,28.6301290598411,18.2592893461818,19.0472101237742,3.29715719325485,3.29355516968675,5.2091337055676,21.217907924105,4.50210088025344,13.5990440521361,10.606629077052,7.68807076315156,7.64237727883732,3.86203585999239,4.91215140694106,3.47837386442013,6.0229671388697,17.6792546764015,7.55584468292944,15.5946340187441,4.03224198387602,3.93244376368905,3.74946709671727,2.33807404142582,3.5333957451034,2.53518155598025,6.41632387071589,2.54805239706646,7.11066703153331,1.73192832808971,3.04031838570118,0.505524445014783,5.1382745873577,3.10725460376606,7.42210695324124,2.25530924795977,8.8294988710521,12.4532368518272,12.2085338847624,17.1679512418129,14.9543243682314,1.48316980640624,3.61498392299779,0.884610551949874,1.7794353494215,1.76673214768315,0.969750506270444,5.59175283654366,13.7606974595427,14.8707161837553,4.59822699375465,0.11981512450592,0,0.254140454146129,17.3757141709594,6.40500843946077,4.02093926761166,31.6360262749943,27.3615539343454,17.0386196538839,17.1975738851823,3.46253837091075,5.47390670684409,8.84529654517861,3.36706969418358,0.780722657776222,2.5289231487682,4.68161537493908,2.71268672104287,5.30684693380357,3.45907044769094,4.12287588062807,6.20888089773638,0.215567992932842,0.756424320671277,1.23165786914764,1.7535658594206,4.17070873838397,4.52727816478817,1.4404749548556,0.398068533636986,0,0,0,0,0.469052119962192,0.720248245844059,0.473489471170421,0.787056926989615,0.308534225774757,0,1.3413670069981,1.05088808130453,0.987359099480883,0.492502392237286,1.54030738137126,0.877199924551994,1.75640092232841,2.28150911892632,45.4226288898515,19.7576855768226,17.1817767151575,8.19796756656987,0.639864751605702,1.16118335930219,1.03093969057675,0.605050573870028,0.444756087689741,1.14135375667535,4.74529061544512,2.30578536613615,4.27269854960458,2.78539060857611,2.14460495831032,7.19055526923377,4.97117514711797,8.76221602319216,0.948339504765408,1.5994791765362,1.1270773567308,1.4255592949172,1.74557238450863,4.34842083319975,5.1853960441891,7.38050739898011,8.00693511991011,8.26760998276064,2.37162101669719,0,0.196558995113203,0,0,0.241177159752417,0,0,0.648540907100142,0.823684239564244,2.87536413054709,2.60498663367952,8.42501717409313,11.8712072635143,12.7372163600558,11.5786445127208,2.40179147216586,0.757965647081939,0.651859905768103,0.339490171550376,0.469380496577004,0.837531287209079,1.6663054862021,3.90267295715598,1.89162172927429,2.6575762757853,3.34855014180723,1.80249646187312,1.55416483679306,1.73578870297814,0,0,4.42587845717133,4.69092468718045,27.9358026578758,24.4972424977705,14.5902101385241,1.00988370881749,3.78609863299508,3.51394869866975,7.32439552291516,12.4263774935327,14.0363164671908,17.5507449089076,6.47697122679831,4.9683495844923,4.74345333535828,24.4204200480573,4.11626247103979,1.06839362200353,3.09485222771795,4.45419332025846,0,0,0,0.188605079755898,0,0.614870295887855,1.80899805217755,1.45413491791002,0.356497378384721,0.948110273807448,1.05418608574999,1.03135543248187,6.46835250932197,1.62054984628179,0.258717367565509,0.214337035031592,0.532020700926821,0.891844088010353,0.658196082408484,1.8267896946876,0.938686832254841,0.21183207086382,13.4522322813527,9.23363016472288,5.16686165426898,4.16159182004275,7.63983001620073,12.8029901801148,8.16146342563582,32.8202784558602,0.170870880797853,0.82554747185289,0,0.376736914009382,0.27338845544205,0.228778173206523,1.69978429993855,0.979660166265606,0.829199842826543,6.68269432610579,0.158167996790568,0.813277868507395,3.24016022465404,3.13632444021703,2.18362563746178,3.50647300600534,5.37247462214684,5.23511883968059,4.40690909192096,13.6694648879124,0,0.299033092087958,0.496375471371293,1.36115831840833,0.904118764344118,0,1.17357238645754,0.911430693907651,0.524296722128554,0,1.15212002503146,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0.537080087002444,0,0.120195449519969,0.147689527174577,0.706765149637033,0,0.100826185136841,0.194915761479505,0,0,0.680191150845634,0,0.179427713218951,0.167884616364078,3.67060228661162,5.81815673898664,4.02933573387983,13.5052078819811,10.5330141847426,14.1187960654267,16.5717085142584,18.9055519435001,13.748254587495,28.773465830367,13.5970901530146,22.2757425076496,28.8205570063501,34.8919654917838,24.8524949640874,0.830298780673413,2.39414924040619,3.24393850932855,2.67417388775123,1.46729213839588,4.22840069435032,1.55572709461131,2.67845574410562,2.24643446714271,2.02157769411038,1.77435509923168,2.45214243801899,2.80924522409647,2.4969809437899,2.5845961030026,2.85776214769844,2.54945517078682,2.70072908649187,2.88460130562315,3.23837624295674,3.08582327146874,1.95223386775271,3.09967046931517,2.47088908274958,2.07040636913727,2.36920902096694,2.19513567447327,2.36762740294059,2.30866993537965,0.561142271657738,2.60997039873183,1.87158516513571,1.63692417267876,2.94379998253335,2.12197272079256,3.2475375131933,3.27504251823572,4.08255002691767,2.86932498103265,3.30887128679273,1.85494268496337
|short_description=p3@Trim2
}}
}}

Latest revision as of 18:28, 25 September 2015

Short description:p3@Trim2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Trim2_5end
Coexpression cluster:MCL_coexpression_mm9:2382
Association with transcript: 78bp_to_uc008ppx.2_5end
EntrezGene:Trim2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Trim2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I38.77
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B97.60
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.37
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.37
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.22
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D93.86
Mouse Schwann, donor2.CNhs12573.11746-123F94.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F415.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.14
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D77.42
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D68.83
adrenal gland, embryo E17.CNhs11043.1263-45I112.45
adrenal gland, embryo E18.CNhs11026.1262-18F512.21
adrenal gland, neonate N00.CNhs11191.1311-23C117.17
adrenal gland, neonate N25.CNhs11223.1377-27I314.95
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B213.76
cerebellum, neonate N30.CNhs11135.1395-42I214.87
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A417.38
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F14.02
cortex, adult.CNhs10473.12-14D531.64
cortex, neonate N30.CNhs11107.1392-42F227.36
diencephalon, adult.CNhs10482.20-12F217.04
diencephalon, neonate N30.CNhs11201.1388-42B217.20
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.47
epididymis, adult.CNhs10490.58-23B28.85
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C65.31
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G84.12
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E845.42
hippocampus, neonate N00.CNhs11228.627-43G119.76
intestinal mucosa, adult.CNhs10506.860-29I317.18
intestine, adult.CNhs10496.178-9A38.20
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G18.76
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G74.35
kidney, neonate N10.CNhs11206.758-6D55.19
kidney, neonate N20.CNhs11113.832-19I17.38
kidney, neonate N25.CNhs11122.1353-25F38.01
kidney, neonate N30.CNhs11203.1385-42H18.27
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B98.43
liver, neonate N20.CNhs11220.823-25A311.87
liver, neonate N25.CNhs11198.1368-26H112.74
liver, neonate N30.CNhs11106.1382-42D111.58
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H24.69
medulla oblongata, adult.CNhs10477.17-12C227.94
medulla oblongata, neonate N30.CNhs11200.1396-42A324.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.59
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.32
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I924.42
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F813.45
skin, adult.CNhs10492.30-1C39.23
skin, neonate N00.CNhs11124.650-25G45.17
skin, neonate N03.CNhs11215.662-22H34.16
skin, neonate N06.CNhs11097.693-20I57.64
skin, neonate N10.CNhs11108.762-6C412.80
small intestine, neonate N16.CNhs11114.790-21I18.16
spinal cord, adult.CNhs10505.24-13C932.82
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A95.37
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I14.41
submandibular gland, adult.CNhs10469.59-29C113.67
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D513.51
vesicular gland, adult.CNhs10491.51-27F810.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.82
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A834.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.85
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell9.74e-1139
electrically active cell9.74e-1139
neuron3.27e-1033
neuronal stem cell3.27e-1033
neuroblast3.27e-1033
electrically signaling cell3.27e-1033
embryonic cell7.99e-1070
neural cell1.96e-0843
ectodermal cell2.52e-0844
neurectodermal cell2.52e-0844
CNS neuron (sensu Vertebrata)8.85e-0823
neuroblast (sensu Vertebrata)8.85e-0823

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.77e-1995
ectoderm1.77e-1995
presumptive ectoderm1.77e-1995
nervous system1.34e-1775
central nervous system2.86e-1773
ecto-epithelium2.73e-1573
gray matter4.70e-1434
regional part of nervous system5.17e-1454
neurectoderm2.35e-1364
neural plate2.35e-1364
presumptive neural plate2.35e-1364
neural tube7.22e-1352
neural rod7.22e-1352
future spinal cord7.22e-1352
neural keel7.22e-1352
brain grey matter2.43e-1229
regional part of telencephalon2.43e-1229
telencephalon2.43e-1229
brain4.20e-1147
future brain4.20e-1147
cerebral cortex5.68e-1121
cerebral hemisphere5.68e-1121
pallium5.68e-1121
regional part of brain1.56e-1046
pre-chordal neural plate2.14e-0949
anterior neural tube2.14e-0940
regional part of cerebral cortex4.45e-0917
regional part of forebrain7.01e-0939
forebrain7.01e-0939
future forebrain7.01e-0939
structure with developmental contribution from neural crest9.17e-0992
occipital lobe1.46e-0710
visual cortex1.46e-0710
neocortex1.46e-0710
adult organism1.88e-0751
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