FFCP PHASE1:Mm9::chr4:124805092..124805135,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:124805092..124805135,-
|short_description=p2@Zc3h12a
|description=CAGE_peak_2_at_Zc3h12a_5end
|association_with_transcript=0bp_to_NM_153159,uc008urx.2,uc00...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=230738 | |EntrezGene=230738 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=710 | |||
|TSSclassifier=NA | |||
|UniProt=Q5D1E7 | |UniProt=Q5D1E7 | ||
|association_with_transcript=0bp_to_NM_153159,uc008urx.2,uc008ury.2_5end | |||
|cluster_id=chr4:124805092..124805135,- | |||
|description=CAGE_peak_2_at_Zc3h12a_5end | |||
|id=chr4:124805092..124805135,- | |||
|ontology_enrichment_celltype=CL:0000063!7.44e-15!66;CL:0002320!2.50e-12!46;CL:0000134!2.50e-12!46;CL:0000219!6.20e-12!54;CL:0000988!1.45e-11!32;CL:0002032!1.45e-11!32;CL:0000037!1.45e-11!32;CL:0000566!1.45e-11!32;CL:0000837!1.45e-11!32;CL:0002031!1.43e-09!25;CL:0000738!3.27e-08!17;CL:0002087!3.27e-08!17;CL:0000838!6.02e-08!12;CL:0000084!2.77e-07!11;CL:0000827!2.77e-07!11;CL:0000791!4.95e-07!9;CL:0000789!4.95e-07!9;CL:0002420!4.95e-07!9;CL:0002419!4.95e-07!9;CL:0000790!4.95e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.58e-12,46;CL:0000134,1.58e-12,46;CL:0000219,4.06e-12,54;CL:0000988,8.85e-12,32;CL:0002032,8.85e-12,32;CL:0000037,8.85e-12,32;CL:0000837,8.85e-12,32;CL:0002031,9.66e-10,25;CL:0000738,2.78e-08,17;CL:0002087,2.78e-08,17;CL:0000838,5.59e-08,12;CL:0000084,2.59e-07,11;CL:0000827,2.59e-07,11;CL:0000791,4.64e-07,9;CL:0000789,4.64e-07,9;CL:0002420,4.64e-07,9;CL:0002419,4.64e-07,9;CL:0000790,4.64e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.77e-15!48;UBERON:0002390!5.60e-14!45;UBERON:0003061!5.60e-14!45;UBERON:0002384!2.50e-12!46;UBERON:0002405!2.36e-10!70;UBERON:0002204!1.15e-09!32;UBERON:0003081!2.62e-09!88;UBERON:0002371!3.62e-08!16;UBERON:0000490!6.91e-08!66;UBERON:0001007!9.28e-08!128;UBERON:0001555!9.28e-08!128;UBERON:0007026!9.28e-08!128;UBERON:0004119!1.19e-07!130;UBERON:0000925!1.19e-07!130;UBERON:0006595!1.19e-07!130;UBERON:0004177!3.35e-07!29;UBERON:0000344!3.63e-07!15;UBERON:0004921!3.94e-07!126;UBERON:0004185!3.94e-07!126;UBERON:0006562!8.40e-07!24;UBERON:0001557!8.40e-07!24;UBERON:0001042!8.40e-07!24;UBERON:0008814!8.40e-07!24;UBERON:0009145!8.40e-07!24;UBERON:0004923!9.26e-07!24;UBERON:0001474!9.94e-07!22;UBERON:0004765!9.94e-07!22;UBERON:0001434!9.94e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.13e-15,48;UBERON:0002405,1.13e-15,48;UBERON:0002390,3.66e-14,45;UBERON:0003061,3.66e-14,45;UBERON:0002384,1.58e-12,46;UBERON:0002204,1.05e-09,32;UBERON:0003081,7.08e-09,87;UBERON:0002371,3.36e-08,16;UBERON:0000077,4.39e-08,35;UBERON:0000490,4.52e-08,66;UBERON:0001007,1.63e-07,116;UBERON:0001555,1.63e-07,116;UBERON:0007026,1.63e-07,116;UBERON:0004119,2.14e-07,118;UBERON:0000925,2.14e-07,118;UBERON:0006595,2.14e-07,118;UBERON:0004177,2.47e-07,29;UBERON:0005057,2.47e-07,29;UBERON:0000344,3.40e-07,15;UBERON:0006562,6.16e-07,24;UBERON:0001557,6.16e-07,24;UBERON:0001042,6.16e-07,24;UBERON:0008814,6.16e-07,24;UBERON:0009145,6.16e-07,24;UBERON:0004921,6.87e-07,114;UBERON:0002370,8.38e-07,23;UBERON:0000974,8.38e-07,23;UBERON:0004807,8.38e-07,23;UBERON:0005058,8.38e-07,23;UBERON:0003351,8.38e-07,23;UBERON:0009113,8.38e-07,23;UBERON:0003295,8.38e-07,23;UBERON:0009722,8.38e-07,23;UBERON:0005562,8.38e-07,23;UBERON:0007690,8.38e-07,23;UBERON:0004923,8.72e-07,24;UBERON:0001474,9.37e-07,22;UBERON:0004765,9.37e-07,22;UBERON:0001434,9.37e-07,22 | |||
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| ||
|short_description=p2@Zc3h12a | |||
}} | }} |
Latest revision as of 08:06, 26 September 2015
Short description: | p2@Zc3h12a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zc3h12a_5end |
Coexpression cluster: | MCL_coexpression_mm9:710 |
Association with transcript: | 0bp_to_NM_153159, uc008urx.2, uc008ury.2_5end |
EntrezGene: | Zc3h12a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.58e-12 | 46 |
mesenchymal cell | 1.58e-12 | 46 |
motile cell | 4.06e-12 | 54 |
hematopoietic cell | 8.85e-12 | 32 |
hematopoietic oligopotent progenitor cell | 8.85e-12 | 32 |
hematopoietic stem cell | 8.85e-12 | 32 |
hematopoietic multipotent progenitor cell | 8.85e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 9.66e-10 | 25 |
leukocyte | 2.78e-08 | 17 |
nongranular leukocyte | 2.78e-08 | 17 |
lymphoid lineage restricted progenitor cell | 5.59e-08 | 12 |
T cell | 2.59e-07 | 11 |
pro-T cell | 2.59e-07 | 11 |
mature alpha-beta T cell | 4.64e-07 | 9 |
alpha-beta T cell | 4.64e-07 | 9 |
immature T cell | 4.64e-07 | 9 |
mature T cell | 4.64e-07 | 9 |
immature alpha-beta T cell | 4.64e-07 | 9 |