FFCP PHASE1:Mm9::chr4:132313077..132313102,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:132313077..132313102,-
|short_description=p2@Smpdl3b
|description=CAGE_peak_2_at_Smpdl3b_5end
|association_with_transcript=0bp_to_NM_133888,uc008vbs.1_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100340 | |EntrezGene=100340 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=P58242,Q3TLX9 | |UniProt=P58242,Q3TLX9 | ||
|association_with_transcript=0bp_to_NM_133888,uc008vbs.1_5end | |||
|cluster_id=chr4:132313077..132313102,- | |||
|description=CAGE_peak_2_at_Smpdl3b_5end | |||
|id=chr4:132313077..132313102,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.35e-09,9;CL:0002251,2.35e-09,9;CL:0002076,3.06e-07,15;CL:0000239,4.83e-07,6;CL:0000677,4.83e-07,6;CL:0000584,4.83e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.94e-10!15;UBERON:0001242!2.89e-09!13;UBERON:0000060!2.89e-09!13;UBERON:0001262!2.89e-09!13;UBERON:0004786!2.89e-09!13;UBERON:0000160!4.27e-09!43;UBERON:0005409!1.20e-07!59;UBERON:0004923!4.40e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.67e-15,15;UBERON:0001242,2.83e-13,13;UBERON:0001262,2.83e-13,13;UBERON:0004786,2.83e-13,13;UBERON:0000160,1.83e-12,31;UBERON:0003350,2.35e-09,9;UBERON:0004808,2.35e-09,9;UBERON:0001277,2.35e-09,9;UBERON:0004923,2.66e-09,24;UBERON:0005409,3.97e-08,47;UBERON:0003133,6.38e-08,24;UBERON:0000485,4.18e-07,11;UBERON:0005156,6.73e-07,26;UBERON:0000990,6.73e-07,26 | |||
|phase1_expression=0.480446541314382,196.47315450096,169.259717052907,145.182821427278,172.308131101543,8.39396359559449,3.03696432774183,1.03298658753261,0,0,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0.946386496074713,0.685572168028694,1.27316895539409,0.765389611359628,0,0,13.1193786690593,14.9116032693661,130.924887818225,49.1068675621345,52.7904520080428,43.3253396360533,74.6009184089395,19.5122849376668,2.54012269383853,1.84519436275371,0,6.35473563452804,10.472782657585,5.71674197534634,0,1.5626706890476,0,0,0,0.485510353031154,0.503587271902309,0.912392380975631,1.10128051297009,0,3.05235218932625,2.63623419281366,1.94429899074283,0.419959264876088,1.43752564364972,0,0,0.336093799142464,0,0,0.515672092277442,0,0,0.633831403506179,0,0,5.84934816232909,5.93319817540185,6.3943210345149,0.599200221036809,1.53687322128622,0.207379224616955,0.135005938331691,0.210324961351382,0.571301968807607,1.10434270475807,0.122490799214954,0.191690942036473,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.279182999001381,1.68828783009504,0.45839474333043,0.294628585473668,0.284743361598206,0,0,0.0755715601067855,0,0,0,0,0,0,3.37066608316204,0,0.259786004602869,0,0,0,0,0,1.08245520505607,1.01343946190039,2.02209778005913,14.0446172054444,0.258937883647172,0.445326417194474,0.867426633830679,0,0.691846491768175,0.452167921657868,0.823120949949934,4.02133092254962,0.247194967734374,1.73519228303894,0.884610551949874,0.647067399789637,1.54589062922275,0.969750506270444,5.59175283654366,0,0.209446706813455,89.6654263782156,1.07833612055328,0,0.635351135365324,0.149790639404823,6.40500843946077,0.125654352112864,0.869121600961382,0.511430914660661,0.83115217823824,1.29793010454206,0.712875546952214,0.995255764880744,1.0108910337347,0.210441855886474,0.390361328888111,0.689706313300419,0.540186389416048,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0.646703978798527,1.13463648100692,0.351902248327898,0.43839146485515,0,0.348252166522167,0.61734640922383,4.57778813682534,0.702213187313235,1.80143534980301,0.852490498186778,0.621377317606506,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,1.07986979021165,0.697601834251224,0,0.467061369468678,0.16455984991348,0.32833492815819,0.324275238183423,0.730999937126662,1.75640092232841,0.402619256281115,1.05144974282064,0,324.140826107106,56.856871832662,0.639864751605702,0.696710015581316,0.902072229254653,0.201683524623343,0.22237804384487,0.380451252225118,33.2170343081158,0.494096864172033,0.502670417600539,2.18852119245266,0.58489226135736,29.6610404855893,21.3976669375947,50.3827421333549,1.89667900953082,0.799739588268102,1.1270773567308,1.4255592949172,1.74557238450863,0.771494018793504,0.316182685621286,0.147610147979602,0.31399745568275,0.493588655687202,0,0.500535317148282,0.589676985339609,0,0,0.482354319504834,0,1.15078454980324,0,0,0,0.372140947668503,0.312037673114561,0,0.538192240565737,0,3.32555742299888,0.37898282354097,1.62964976442026,1.18821560042632,0.234690248288502,1.50755631697634,0.476087281772027,0.780534591431195,1.10344600874334,1.10732344824387,0.637819074629948,2.94953966488328,3.28101465545202,1.01254341007058,9.04747703635634,38.6173035511284,1.47529281905711,0.551873492609465,0.160550589987792,0.117211686592203,0,0.757412781613119,0.315508219416257,0.780877488593277,0.430846795465598,0.238968797952552,0.445597348164788,0.283076530788832,0.809621403349789,1.75353514746787,0,0.321321316421807,7.94864477166304,5.52003371368491,2.60619134965722,0.989820737835213,1.32745138339963,1.94224508923985,3.02323556964751,0.565815239267694,1.18120757152309,0.307435147943927,0.775284879504663,0,0,0.632073515871632,0,1.03135543248187,0,0.720244376125241,0.129358683782755,0.428674070063185,0,0,0,0.608929898229199,4.92810586933792,0.847328283455281,0.220528398054962,0.98931751764888,0.322928853391811,1.02531972377865,1.43246812803764,1.14898629821543,8.74442509889552,1.11255181206306,0.512612642393558,1.03193433981611,0.185194527369712,0,0.410082683163076,0.457556346413045,0.509935289981566,0.279902904647316,0.414599921413271,1.90934123603023,0.474503990371703,0.203319467126849,0.648032044930808,0.627264888043406,0.218362563746178,1.07891477107857,0.743881101528023,0.523511883968059,2.07383957266869,0,0,3.43888055901151,6.12196414691261,9.13920585217024,8.91202781996345,10.8131920314098,4.3422178298929,4.4269490846943,3.56521771047417,1.20792060413003,0.576060012515731,0,0.810900861160657,0.102710957164827,0.129920822977795,0.179026695667481,0,0.360586348559907,0.295379054349154,0.302899349844443,0,0.201652370273681,0.194915761479505,0.192423683280659,0,0.680191150845634,1.55390167361845,0.538283139656854,1.00730769818447,0.579568782096571,1.12609485270709,1.28206136987086,4.07299920250225,0,0,0,0,0.343706364687375,1.37016503954128,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0.207574695168353,0,0.682934423016537,0.729320151204882,0,0.3676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| |phase1_expression=0.480446541314382,196.47315450096,169.259717052907,145.182821427278,172.308131101543,8.39396359559449,3.03696432774183,1.03298658753261,0,0,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0.946386496074713,0.685572168028694,1.27316895539409,0.765389611359628,0,0,13.1193786690593,14.9116032693661,130.924887818225,49.1068675621345,52.7904520080428,43.3253396360533,74.6009184089395,19.5122849376668,2.54012269383853,1.84519436275371,0,6.35473563452804,10.472782657585,5.71674197534634,0,1.5626706890476,0,0,0,0.485510353031154,0.503587271902309,0.912392380975631,1.10128051297009,0,3.05235218932625,2.63623419281366,1.94429899074283,0.419959264876088,1.43752564364972,0,0,0.336093799142464,0,0,0.515672092277442,0,0,0.633831403506179,0,0,5.84934816232909,5.93319817540185,6.3943210345149,0.599200221036809,1.53687322128622,0.207379224616955,0.135005938331691,0.210324961351382,0.571301968807607,1.10434270475807,0.122490799214954,0.191690942036473,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.279182999001381,1.68828783009504,0.45839474333043,0.294628585473668,0.284743361598206,0,0,0.0755715601067855,0,0,0,0,0,0,3.37066608316204,0,0.259786004602869,0,0,0,0,0,1.08245520505607,1.01343946190039,2.02209778005913,14.0446172054444,0.258937883647172,0.445326417194474,0.867426633830679,0,0.691846491768175,0.452167921657868,0.823120949949934,4.02133092254962,0.247194967734374,1.73519228303894,0.884610551949874,0.647067399789637,1.54589062922275,0.969750506270444,5.59175283654366,0,0.209446706813455,89.6654263782156,1.07833612055328,0,0.635351135365324,0.149790639404823,6.40500843946077,0.125654352112864,0.869121600961382,0.511430914660661,0.83115217823824,1.29793010454206,0.712875546952214,0.995255764880744,1.0108910337347,0.210441855886474,0.390361328888111,0.689706313300419,0.540186389416048,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0.646703978798527,1.13463648100692,0.351902248327898,0.43839146485515,0,0.348252166522167,0.61734640922383,4.57778813682534,0.702213187313235,1.80143534980301,0.852490498186778,0.621377317606506,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,1.07986979021165,0.697601834251224,0,0.467061369468678,0.16455984991348,0.32833492815819,0.324275238183423,0.730999937126662,1.75640092232841,0.402619256281115,1.05144974282064,0,324.140826107106,56.856871832662,0.639864751605702,0.696710015581316,0.902072229254653,0.201683524623343,0.22237804384487,0.380451252225118,33.2170343081158,0.494096864172033,0.502670417600539,2.18852119245266,0.58489226135736,29.6610404855893,21.3976669375947,50.3827421333549,1.89667900953082,0.799739588268102,1.1270773567308,1.4255592949172,1.74557238450863,0.771494018793504,0.316182685621286,0.147610147979602,0.31399745568275,0.493588655687202,0,0.500535317148282,0.589676985339609,0,0,0.482354319504834,0,1.15078454980324,0,0,0,0.372140947668503,0.312037673114561,0,0.538192240565737,0,3.32555742299888,0.37898282354097,1.62964976442026,1.18821560042632,0.234690248288502,1.50755631697634,0.476087281772027,0.780534591431195,1.10344600874334,1.10732344824387,0.637819074629948,2.94953966488328,3.28101465545202,1.01254341007058,9.04747703635634,38.6173035511284,1.47529281905711,0.551873492609465,0.160550589987792,0.117211686592203,0,0.757412781613119,0.315508219416257,0.780877488593277,0.430846795465598,0.238968797952552,0.445597348164788,0.283076530788832,0.809621403349789,1.75353514746787,0,0.321321316421807,7.94864477166304,5.52003371368491,2.60619134965722,0.989820737835213,1.32745138339963,1.94224508923985,3.02323556964751,0.565815239267694,1.18120757152309,0.307435147943927,0.775284879504663,0,0,0.632073515871632,0,1.03135543248187,0,0.720244376125241,0.129358683782755,0.428674070063185,0,0,0,0.608929898229199,4.92810586933792,0.847328283455281,0.220528398054962,0.98931751764888,0.322928853391811,1.02531972377865,1.43246812803764,1.14898629821543,8.74442509889552,1.11255181206306,0.512612642393558,1.03193433981611,0.185194527369712,0,0.410082683163076,0.457556346413045,0.509935289981566,0.279902904647316,0.414599921413271,1.90934123603023,0.474503990371703,0.203319467126849,0.648032044930808,0.627264888043406,0.218362563746178,1.07891477107857,0.743881101528023,0.523511883968059,2.07383957266869,0,0,3.43888055901151,6.12196414691261,9.13920585217024,8.91202781996345,10.8131920314098,4.3422178298929,4.4269490846943,3.56521771047417,1.20792060413003,0.576060012515731,0,0.810900861160657,0.102710957164827,0.129920822977795,0.179026695667481,0,0.360586348559907,0.295379054349154,0.302899349844443,0,0.201652370273681,0.194915761479505,0.192423683280659,0,0.680191150845634,1.55390167361845,0.538283139656854,1.00730769818447,0.579568782096571,1.12609485270709,1.28206136987086,4.07299920250225,0,0,0,0,0.343706364687375,1.37016503954128,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0.207574695168353,0,0.682934423016537,0.729320151204882,0,0.3676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| ||
|short_description=p2@Smpdl3b | |||
}} | }} |
Latest revision as of 11:01, 26 September 2015
Short description: | p2@Smpdl3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Smpdl3b_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_NM_133888, uc008vbs.1_5end |
EntrezGene: | Smpdl3b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.35e-09 | 9 |
epithelial cell of alimentary canal | 2.35e-09 | 9 |
endo-epithelial cell | 3.06e-07 | 15 |
brush border epithelial cell | 4.83e-07 | 6 |
gut absorptive cell | 4.83e-07 | 6 |
enterocyte | 4.83e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.67e-15 | 15 |
intestinal mucosa | 2.83e-13 | 13 |
wall of intestine | 2.83e-13 | 13 |
gastrointestinal system mucosa | 2.83e-13 | 13 |
intestine | 1.83e-12 | 31 |
epithelium of mucosa | 2.35e-09 | 9 |
gastrointestinal system epithelium | 2.35e-09 | 9 |
intestinal epithelium | 2.35e-09 | 9 |
organ component layer | 2.66e-09 | 24 |
gastrointestinal system | 3.97e-08 | 47 |
reproductive organ | 6.38e-08 | 24 |
simple columnar epithelium | 4.18e-07 | 11 |
reproductive structure | 6.73e-07 | 26 |
reproductive system | 6.73e-07 | 26 |