FFCP PHASE1:Mm9::chr4:133899438..133899450,+: Difference between revisions
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|id=chr4:133899438..133899450,+
|short_description=p8@Slc30a2
|description=CAGE_peak_8_at_Slc30a2_5end
|association_with_transcript=57bp_to_ENSMUST00000105872_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=230810 | |EntrezGene=230810 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z5N1 | |UniProt=D3Z5N1 | ||
|association_with_transcript=57bp_to_ENSMUST00000105872_5end | |||
|cluster_id=chr4:133899438..133899450,+ | |||
|description=CAGE_peak_8_at_Slc30a2_5end | |||
|id=chr4:133899438..133899450,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.34e-10!9;CL:0002251!4.34e-10!9;CL:0000239!1.66e-09!6;CL:0000677!1.66e-09!6;CL:0000212!1.66e-09!6;CL:0000584!1.66e-09!6;CL:0000075!5.46e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.71e-14,3;CL:0000239,2.26e-11,6;CL:0000677,2.26e-11,6;CL:0000584,2.26e-11,6;CL:0000075,9.16e-10,7;CL:0000066,1.29e-07,25;CL:0002563,1.29e-07,9;CL:0002251,1.29e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.57e-18!15;UBERON:0000160!1.13e-17!43;UBERON:0004923!4.85e-17!24;UBERON:0001242!2.24e-15!13;UBERON:0000060!2.24e-15!13;UBERON:0001262!2.24e-15!13;UBERON:0004786!2.24e-15!13;UBERON:0005409!7.96e-13!59;UBERON:0003350!4.34e-10!9;UBERON:0004808!4.34e-10!9;UBERON:0001277!4.34e-10!9;UBERON:0000485!6.31e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.46e-21,15;UBERON:0000160,7.90e-17,31;UBERON:0004923,1.11e-15,24;UBERON:0001242,6.83e-15,13;UBERON:0001262,6.83e-15,13;UBERON:0004786,6.83e-15,13;UBERON:0000331,6.17e-13,3;UBERON:0002116,6.17e-13,3;UBERON:0001204,6.17e-13,3;UBERON:0001168,6.17e-13,3;UBERON:0005409,2.09e-10,47;UBERON:0002108,7.94e-10,4;UBERON:0001962,2.02e-09,2;UBERON:0001961,2.02e-09,2;UBERON:0001744,2.02e-09,2;UBERON:0001911,3.91e-09,2;UBERON:0000076,3.91e-09,2;UBERON:0005333,3.91e-09,2;UBERON:0008425,3.91e-09,2;UBERON:0005311,3.91e-09,2;UBERON:0007023,1.03e-07,51;UBERON:0003350,1.29e-07,9;UBERON:0004808,1.29e-07,9;UBERON:0001277,1.29e-07,9 | |||
|phase1_expression=0,4.18770489167233,5.45999087267443,0.30246421130683,0.500895729946347,2.01455126294268,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7997726838022,3.67054849707472,6.89078356938024,5.59990595006797,6.67960821326256,1.52018735565099,2.26827116783938,6.20845429834853,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.301445281105245,0,0,1.73036477414062,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,1.0108910337347,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.58670339998127,0,0,0,0.201683524623343,0.22237804384487,1.33157938278791,0.949058123089023,2.30578536613615,1.75934646160189,0.596869416123452,1.75467678407208,0.898819408654221,0,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90117127622843,1.37968373152366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.63549621259146,1.32317038832977,0,0,0,0,0,0.874442509889552,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0.194915761479505,0,0,0,0,0.179427713218951,0.167884616364078,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=0,4.18770489167233,5.45999087267443,0.30246421130683,0.500895729946347,2.01455126294268,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7997726838022,3.67054849707472,6.89078356938024,5.59990595006797,6.67960821326256,1.52018735565099,2.26827116783938,6.20845429834853,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.301445281105245,0,0,1.73036477414062,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,1.0108910337347,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.58670339998127,0,0,0,0.201683524623343,0.22237804384487,1.33157938278791,0.949058123089023,2.30578536613615,1.75934646160189,0.596869416123452,1.75467678407208,0.898819408654221,0,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90117127622843,1.37968373152366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.63549621259146,1.32317038832977,0,0,0,0,0,0.874442509889552,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0.194915761479505,0,0,0,0,0.179427713218951,0.167884616364078,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p8@Slc30a2 | |||
}} | }} |
Latest revision as of 12:10, 26 September 2015
Short description: | p8@Slc30a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Slc30a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 57bp_to_ENSMUST00000105872_5end |
EntrezGene: | Slc30a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 5.71e-14 | 3 |
brush border epithelial cell | 2.26e-11 | 6 |
gut absorptive cell | 2.26e-11 | 6 |
enterocyte | 2.26e-11 | 6 |
columnar/cuboidal epithelial cell | 9.16e-10 | 7 |
epithelial cell | 1.29e-07 | 25 |
intestinal epithelial cell | 1.29e-07 | 9 |
epithelial cell of alimentary canal | 1.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.46e-21 | 15 |
intestine | 7.90e-17 | 31 |
organ component layer | 1.11e-15 | 24 |
intestinal mucosa | 6.83e-15 | 13 |
wall of intestine | 6.83e-15 | 13 |
gastrointestinal system mucosa | 6.83e-15 | 13 |
ileal mucosa | 6.17e-13 | 3 |
ileum | 6.17e-13 | 3 |
mucosa of small intestine | 6.17e-13 | 3 |
wall of small intestine | 6.17e-13 | 3 |
gastrointestinal system | 2.09e-10 | 47 |
small intestine | 7.94e-10 | 4 |
gut-associated lymphoid tissue | 2.02e-09 | 2 |
mucosa-associated lymphoid tissue | 2.02e-09 | 2 |
lymphoid tissue | 2.02e-09 | 2 |
mammary gland | 3.91e-09 | 2 |
external ectoderm | 3.91e-09 | 2 |
mammary bud | 3.91e-09 | 2 |
mammary ridge | 3.91e-09 | 2 |
mammary placode | 3.91e-09 | 2 |
adult organism | 1.03e-07 | 51 |
epithelium of mucosa | 1.29e-07 | 9 |
gastrointestinal system epithelium | 1.29e-07 | 9 |
intestinal epithelium | 1.29e-07 | 9 |