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FFCP PHASE1:Mm9::chr5:34630967..34631021,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:34630967..34631021,-
|DHSsupport=NA
|short_description=p2@Zfyve28
|DPIdataset=NA
|description=CAGE_peak_2_at_Zfyve28_5end
|association_with_transcript=0bp_to_ENSMUST00000094868,NM_001015039,uc008xca.1_5end
|EntrezGene=231125
|EntrezGene=231125
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=Q6ZPK7
|UniProt=Q6ZPK7
|association_with_transcript=0bp_to_ENSMUST00000094868,NM_001015039,uc008xca.1_5end
|cluster_id=chr5:34630967..34631021,-
|description=CAGE_peak_2_at_Zfyve28_5end
|id=chr5:34630967..34631021,-
|ontology_enrichment_celltype=CL:0000221!2.43e-15!44;CL:0000133!2.43e-15!44;CL:0002319!3.13e-15!43;CL:0000540!2.11e-13!33;CL:0000047!2.11e-13!33;CL:0000031!2.11e-13!33;CL:0000404!2.11e-13!33;CL:0000117!2.53e-13!23;CL:0000337!2.53e-13!23;CL:0000055!8.47e-11!50;CL:0000393!2.51e-09!39;CL:0000211!2.51e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,8.92e-21,23;CL:0000337,8.92e-21,23;CL:0000540,1.91e-15,33;CL:0000047,1.91e-15,33;CL:0000031,1.91e-15,33;CL:0000404,1.91e-15,33;CL:0002319,6.85e-14,43;CL:0000221,2.04e-13,44;CL:0000133,2.04e-13,44;CL:0000393,4.14e-12,39;CL:0000211,4.14e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.70e-32!75;UBERON:0001016!2.70e-32!75;UBERON:0001017!7.18e-32!73;UBERON:0005743!7.18e-32!73;UBERON:0004121!7.62e-28!102;UBERON:0000924!7.62e-28!102;UBERON:0006601!7.62e-28!102;UBERON:0001049!7.44e-25!52;UBERON:0005068!7.44e-25!52;UBERON:0006241!7.44e-25!52;UBERON:0007135!7.44e-25!52;UBERON:0000955!1.07e-23!50;UBERON:0006238!1.07e-23!50;UBERON:0002346!2.40e-23!71;UBERON:0003075!2.40e-23!71;UBERON:0007284!2.40e-23!71;UBERON:0002616!6.34e-23!49;UBERON:0000033!8.90e-23!63;UBERON:0002020!1.63e-21!34;UBERON:0003056!1.30e-18!49;UBERON:0002791!2.36e-18!29;UBERON:0003528!2.36e-18!29;UBERON:0001893!2.36e-18!29;UBERON:0003080!2.82e-18!40;UBERON:0002780!1.51e-17!39;UBERON:0001890!1.51e-17!39;UBERON:0006240!1.51e-17!39;UBERON:0000956!1.46e-13!21;UBERON:0001869!1.46e-13!21;UBERON:0000203!1.46e-13!21;UBERON:0002619!2.42e-11!17;UBERON:0007811!4.23e-11!86;UBERON:0000153!9.57e-10!94;UBERON:0002021!4.98e-09!10;UBERON:0000411!4.98e-09!10;UBERON:0001950!4.98e-09!10;UBERON:0003076!3.68e-07!12;UBERON:0003057!3.68e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-43,54;UBERON:0001017,1.91e-41,73;UBERON:0001049,5.27e-41,52;UBERON:0005068,5.27e-41,52;UBERON:0006241,5.27e-41,52;UBERON:0007135,5.27e-41,52;UBERON:0001016,5.78e-40,75;UBERON:0002346,2.56e-38,64;UBERON:0003075,2.56e-38,64;UBERON:0007284,2.56e-38,64;UBERON:0002020,7.60e-37,34;UBERON:0000955,7.28e-35,47;UBERON:0006238,7.28e-35,47;UBERON:0004121,1.27e-34,95;UBERON:0000924,1.27e-34,95;UBERON:0006601,1.27e-34,95;UBERON:0002616,1.86e-33,46;UBERON:0010371,5.61e-32,73;UBERON:0003528,8.79e-31,29;UBERON:0002791,8.79e-31,29;UBERON:0001893,8.79e-31,29;UBERON:0003080,5.38e-28,40;UBERON:0003056,6.20e-28,49;UBERON:0002780,1.16e-26,39;UBERON:0001890,1.16e-26,39;UBERON:0006240,1.16e-26,39;UBERON:0010314,1.08e-22,92;UBERON:0000956,1.31e-21,21;UBERON:0001869,1.31e-21,21;UBERON:0000203,1.31e-21,21;UBERON:0002619,2.36e-17,17;UBERON:0002021,6.37e-16,10;UBERON:0000411,6.37e-16,10;UBERON:0001950,6.37e-16,10;UBERON:0003076,4.97e-13,12;UBERON:0003057,4.97e-13,12;UBERON:0000025,3.44e-12,114;UBERON:0004111,1.20e-10,122;UBERON:0002420,3.99e-10,8;UBERON:0007245,3.99e-10,8;UBERON:0010009,3.99e-10,8;UBERON:0010011,3.99e-10,8;UBERON:0000454,3.99e-10,8;UBERON:0002240,2.47e-08,6;UBERON:0005174,2.47e-08,6;UBERON:0001137,2.47e-08,6;UBERON:0011216,1.05e-07,194;UBERON:0001948,4.91e-07,5;UBERON:0002315,4.91e-07,5
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,3.48677489619386,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,1.36100929351998,0.279972843250725,2.87505128729943,0,0,0,0,0,0,2.83243045203437,0.528990979272033,2.53532561402472,0,0.889294796111139,0,0,0,0.898800331555214,0.768436610643109,1.45165457231869,1.75507719831198,2.3135745748652,7.7125765789027,6.84692476950002,1.34739879136449,0.670918297127655,1.83843757322004,8.8092704799511,6.63974158042976,6.29786786350598,1.71452174049252,1.18933936683133,2.6045668527838,7.53794097303729,3.37657566019008,5.50073691996516,3.53554302568401,2.84743361598206,1.86399445825301,0.227178579999552,0.604572480854284,0.289864488701678,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.144599356919912,2.65383165584962,0.485300549842228,0,0,0,25.1791485429931,31.8358994356452,0.255457055208591,0,0,0,10.6351353977424,21.0450277296568,3.39266750704734,16.1656617778817,16.6215047264715,7.89594569326328,12.9793010454206,0.203678727700633,0.124406970610093,0,7.36546495602659,0,0,0,0.753524089178575,1.02054748726992,0.512454881139399,1.21812241927647,9.31332134660456,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0,5.46753866266731,1.64647379806855,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,6.90367536947505,6.56385444916338,0,0,0.315508219416257,0,0.646270193198397,0,0.445597348164788,0.283076530788832,0.809621403349789,1.16902343164525,1.58115111178609,11.5675673911851,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,1.36175842301515,0,0,0,0.177340233642274,0.178368817602071,0.822745103010605,0.608929898229199,0,0,0.220528398054962,0.16488625294148,0,0.241251699712623,0.119372344003136,0.164140899745061,0,8.90041449650446,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0.218362563746178,0.134864346384821,0.41326727862668,0,0,0,0,0.149516546043979,0.330916980914195,0.972255941720238,1.29159823477731,1.85851738039856,5.28107573905893,1.69265700297135,1.8874681996628,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0,0,0,15.8130515932779,7.82552902062201,14.3223878359849,19.7631159695241,13.0165678756422,15.8632718451837,16.2005400055633,18.9134905354173,17.672553950384,17.0860902878101,0,0.798049746802062,0.682934423016537,0,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,1.32038438970253,0.0936415074698824,0.448176066834085,0.574354689556133,1.42888107384922,0.347652977834566,0.77163688185482,0,0.294397840268795,0.685738504770831,0.532427418478012,0.476872379894642,0.581385666529314,0.658765662907314,0.761531471025089,0.73171189149109,0,0.407412341537585,0,0.474540072496697,0.689531376628944,0,1.08455788830176,0.964533054905707,1.99848462350357,0.233931608445408,0.214871054048298,0.765153328275374,0.661774257358546,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,3.48677489619386,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,1.36100929351998,0.279972843250725,2.87505128729943,0,0,0,0,0,0,2.83243045203437,0.528990979272033,2.53532561402472,0,0.889294796111139,0,0,0,0.898800331555214,0.768436610643109,1.45165457231869,1.75507719831198,2.3135745748652,7.7125765789027,6.84692476950002,1.34739879136449,0.670918297127655,1.83843757322004,8.8092704799511,6.63974158042976,6.29786786350598,1.71452174049252,1.18933936683133,2.6045668527838,7.53794097303729,3.37657566019008,5.50073691996516,3.53554302568401,2.84743361598206,1.86399445825301,0.227178579999552,0.604572480854284,0.289864488701678,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.144599356919912,2.65383165584962,0.485300549842228,0,0,0,25.1791485429931,31.8358994356452,0.255457055208591,0,0,0,10.6351353977424,21.0450277296568,3.39266750704734,16.1656617778817,16.6215047264715,7.89594569326328,12.9793010454206,0.203678727700633,0.124406970610093,0,7.36546495602659,0,0,0,0.753524089178575,1.02054748726992,0.512454881139399,1.21812241927647,9.31332134660456,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0,5.46753866266731,1.64647379806855,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,6.90367536947505,6.56385444916338,0,0,0.315508219416257,0,0.646270193198397,0,0.445597348164788,0.283076530788832,0.809621403349789,1.16902343164525,1.58115111178609,11.5675673911851,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,1.36175842301515,0,0,0,0.177340233642274,0.178368817602071,0.822745103010605,0.608929898229199,0,0,0.220528398054962,0.16488625294148,0,0.241251699712623,0.119372344003136,0.164140899745061,0,8.90041449650446,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0.218362563746178,0.134864346384821,0.41326727862668,0,0,0,0,0.149516546043979,0.330916980914195,0.972255941720238,1.29159823477731,1.85851738039856,5.28107573905893,1.69265700297135,1.8874681996628,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0,0,0,15.8130515932779,7.82552902062201,14.3223878359849,19.7631159695241,13.0165678756422,15.8632718451837,16.2005400055633,18.9134905354173,17.672553950384,17.0860902878101,0,0.798049746802062,0.682934423016537,0,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,1.32038438970253,0.0936415074698824,0.448176066834085,0.574354689556133,1.42888107384922,0.347652977834566,0.77163688185482,0,0.294397840268795,0.685738504770831,0.532427418478012,0.476872379894642,0.581385666529314,0.658765662907314,0.761531471025089,0.73171189149109,0,0.407412341537585,0,0.474540072496697,0.689531376628944,0,1.08455788830176,0.964533054905707,1.99848462350357,0.233931608445408,0.214871054048298,0.765153328275374,0.661774257358546,0.231867835620421
|short_description=p2@Zfyve28
}}
}}

Latest revision as of 23:26, 25 September 2015

Short description:p2@Zfyve28
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Zfyve28_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 0bp_to_ENSMUST00000094868, NM_001015039, uc008xca.1_5end
EntrezGene:Zfyve28
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Zfyve28

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B225.18
cerebellum, neonate N30.CNhs11135.1395-42I231.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.64
corpus striatum, adult.CNhs10487.19-21D821.05
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D516.17
cortex, neonate N30.CNhs11107.1392-42F216.62
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B212.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G47.37
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A29.31
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A36.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B75.28
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.67
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.92e-2123
neuroblast (sensu Vertebrata)8.92e-2123
neuron1.91e-1533
neuronal stem cell1.91e-1533
neuroblast1.91e-1533
electrically signaling cell1.91e-1533
neural cell6.85e-1443
ectodermal cell2.04e-1344
neurectodermal cell2.04e-1344
electrically responsive cell4.14e-1239
electrically active cell4.14e-1239

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.20e-4354
central nervous system1.91e-4173
neural tube5.27e-4152
neural rod5.27e-4152
future spinal cord5.27e-4152
neural keel5.27e-4152
nervous system5.78e-4075
neurectoderm2.56e-3864
neural plate2.56e-3864
presumptive neural plate2.56e-3864
gray matter7.60e-3734
brain7.28e-3547
future brain7.28e-3547
ectoderm-derived structure1.27e-3495
ectoderm1.27e-3495
presumptive ectoderm1.27e-3495
regional part of brain1.86e-3346
ecto-epithelium5.61e-3273
brain grey matter8.79e-3129
regional part of telencephalon8.79e-3129
telencephalon8.79e-3129
anterior neural tube5.38e-2840
pre-chordal neural plate6.20e-2849
regional part of forebrain1.16e-2639
forebrain1.16e-2639
future forebrain1.16e-2639
structure with developmental contribution from neural crest1.08e-2292
cerebral cortex1.31e-2121
cerebral hemisphere1.31e-2121
pallium1.31e-2121
regional part of cerebral cortex2.36e-1717
occipital lobe6.37e-1610
visual cortex6.37e-1610
neocortex6.37e-1610
posterior neural tube4.97e-1312
chordal neural plate4.97e-1312
tube3.44e-12114
anatomical conduit1.20e-10122
basal ganglion3.99e-108
nuclear complex of neuraxis3.99e-108
aggregate regional part of brain3.99e-108
collection of basal ganglia3.99e-108
cerebral subcortex3.99e-108
spinal cord2.47e-086
dorsal region element2.47e-086
dorsum2.47e-086
organ system subdivision1.05e-07194
regional part of spinal cord4.91e-075
gray matter of spinal cord4.91e-075
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