FFCP PHASE1:Mm9::chr5:88354649..88354664,+: Difference between revisions
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|id=chr5:88354649..88354664,+
|short_description=p2@Csn3
|description=CAGE_peak_2_at_Csn3_5end
|association_with_transcript=0bp_to_ENSMUST00000113271,ENSMUST0000014...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12994 | |EntrezGene=12994 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=37 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D1U2 | |UniProt=Q9D1U2 | ||
|association_with_transcript=0bp_to_ENSMUST00000113271,ENSMUST00000140690,NM_007786,uc008xzg.1,uc008xzh.1,uc008xzi.1_5end | |||
|cluster_id=chr5:88354649..88354664,+ | |||
|description=CAGE_peak_2_at_Csn3_5end | |||
|id=chr5:88354649..88354664,+ | |||
|ontology_enrichment_celltype=CL:0000107!8.02e-13!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.63e-35,9;CL:0000393,1.59e-10,39;CL:0000211,1.59e-10,39;CL:0000540,1.15e-08,33;CL:0000047,1.15e-08,33;CL:0000031,1.15e-08,33;CL:0000404,1.15e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!8.02e-13!9;UBERON:0000010!1.23e-11!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.63e-35,9;UBERON:0000010,8.13e-29,11;UBERON:0010313,2.61e-13,3;UBERON:0002342,2.61e-13,3;UBERON:0002005,2.61e-13,3;UBERON:0005428,2.61e-13,3;UBERON:0005062,2.61e-13,3;UBERON:0000013,6.55e-13,3;UBERON:0000011,1.77e-12,3;UBERON:0001911,1.25e-09,2;UBERON:0000076,1.25e-09,2;UBERON:0005333,1.25e-09,2;UBERON:0008425,1.25e-09,2;UBERON:0005311,1.25e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,1.28629718017973,0.286533439938757,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49301775374664,0.232236671860439,0.257734922644187,0,0,0,0,1.64698954724011,0,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68452.6032757038,16922.3728406303,0,0,0,0,61.5241027861701,80.8208200694042,58.5951641833213,6.69112634267146,10.2487390077901,5.37845408498782,9.31064613852257,23.6727244908163,20.5549644532192,0,0.283880170416537,0,0,0,0,0,0,0,0.295301892880773,0,2.32585463851399,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0.322928853391811,0.542816324353403,0.596861720015682,0.164140899745061,0,0,0,0,0,0.565105371014073,0,0,0,0,0,0,0.316335993581135,0,0,0,0,5.79916689454729,8.43065248398426,0,0,5.59205381778233,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0.487289403698762,0.0962118416403295,0.233753804363138,0.680191150845634,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,0,0.565879024158229,0.655490552289177,0.576226371643824,0.34461281373368,0.952587382566147,0.347652977834566,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.423073039458382,0.182927972872773,1.05227884575137,0.543216455383447,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0.464810523557898,0.385813221962283,1.74867404556562,0.935726433781634,1.50409737833809,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,1.28629718017973,0.286533439938757,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49301775374664,0.232236671860439,0.257734922644187,0,0,0,0,1.64698954724011,0,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68452.6032757038,16922.3728406303,0,0,0,0,61.5241027861701,80.8208200694042,58.5951641833213,6.69112634267146,10.2487390077901,5.37845408498782,9.31064613852257,23.6727244908163,20.5549644532192,0,0.283880170416537,0,0,0,0,0,0,0,0.295301892880773,0,2.32585463851399,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0.322928853391811,0.542816324353403,0.596861720015682,0.164140899745061,0,0,0,0,0,0.565105371014073,0,0,0,0,0,0,0.316335993581135,0,0,0,0,5.79916689454729,8.43065248398426,0,0,5.59205381778233,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0.487289403698762,0.0962118416403295,0.233753804363138,0.680191150845634,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,0,0.565879024158229,0.655490552289177,0.576226371643824,0.34461281373368,0.952587382566147,0.347652977834566,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.423073039458382,0.182927972872773,1.05227884575137,0.543216455383447,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0.464810523557898,0.385813221962283,1.74867404556562,0.935726433781634,1.50409737833809,0,0,0 | ||
|short_description=p2@Csn3 | |||
}} | }} |
Latest revision as of 07:11, 26 September 2015
Short description: | p2@Csn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Csn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:37 |
Association with transcript: | 0bp_to_ENSMUST00000113271, ENSMUST00000140690, NM_007786, uc008xzg.1, uc008xzh.1, uc008xzi.1_5end |
EntrezGene: | Csn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.63e-35 | 9 |
electrically responsive cell | 1.59e-10 | 39 |
electrically active cell | 1.59e-10 | 39 |
neuron | 1.15e-08 | 33 |
neuronal stem cell | 1.15e-08 | 33 |
neuroblast | 1.15e-08 | 33 |
electrically signaling cell | 1.15e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.63e-35 | 9 |
peripheral nervous system | 8.13e-29 | 11 |
neural crest-derived structure | 2.61e-13 | 3 |
neural crest | 2.61e-13 | 3 |
enteric nervous system | 2.61e-13 | 3 |
vagal neural crest | 2.61e-13 | 3 |
neural fold | 2.61e-13 | 3 |
sympathetic nervous system | 6.55e-13 | 3 |
parasympathetic nervous system | 1.77e-12 | 3 |
mammary gland | 1.25e-09 | 2 |
external ectoderm | 1.25e-09 | 2 |
mammary bud | 1.25e-09 | 2 |
mammary ridge | 1.25e-09 | 2 |
mammary placode | 1.25e-09 | 2 |