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FFCP PHASE1:Mm9::chr5:93238358..93238397,+: Difference between revisions

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(Created page with "{{FFCP |id=chr5:93238358..93238397,+ |short_description=p2@Shroom3 |description=CAGE_peak_2_at_Shroom3_5end |association_with_transcript=-6bp_to_ENSMUST00000113054_5end |...")
 
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{{FFCP
{{FFCP
|id=chr5:93238358..93238397,+
|DHSsupport=NA
|short_description=p2@Shroom3
|DPIdataset=NA
|description=CAGE_peak_2_at_Shroom3_5end
|association_with_transcript=-6bp_to_ENSMUST00000113054_5end
|EntrezGene=27428
|EntrezGene=27428
|HGNC=
|HGNC=
|MCL_coexpression_id=2203
|TSSclassifier=NA
|UniProt=Q9QXN0
|UniProt=Q9QXN0
|association_with_transcript=-6bp_to_ENSMUST00000113054_5end
|cluster_id=chr5:93238358..93238397,+
|description=CAGE_peak_2_at_Shroom3_5end
|id=chr5:93238358..93238397,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,8.14e-07,9;CL:0002251,8.14e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!3.15e-18!59;UBERON:0000160!1.40e-17!43;UBERON:0000344!5.75e-10!15;UBERON:0001242!7.67e-09!13;UBERON:0000060!7.67e-09!13;UBERON:0001262!7.67e-09!13;UBERON:0004786!7.67e-09!13;UBERON:0003103!1.03e-07!43;UBERON:0004923!4.58e-07!24;UBERON:0001007!8.09e-07!128;UBERON:0001555!8.09e-07!128;UBERON:0007026!8.09e-07!128;UBERON:0004119!9.31e-07!130;UBERON:0000925!9.31e-07!130;UBERON:0006595!9.31e-07!130
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.97e-15,31;UBERON:0005409,9.24e-15,47;UBERON:0000344,1.61e-10,15;UBERON:0001242,2.54e-09,13;UBERON:0001262,2.54e-09,13;UBERON:0004786,2.54e-09,13;UBERON:0003103,1.79e-07,43;UBERON:0003350,8.14e-07,9;UBERON:0004808,8.14e-07,9;UBERON:0001277,8.14e-07,9
|phase1_expression=1.44133962394315,105.041597699448,99.1898341869189,62.9125559518207,72.128985112274,72.0202076502007,63.542638241983,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71841992193451,0,0,31.1985224447143,28.2173415712619,66.6109078373423,35.7532456812032,48.481027354325,48.0759251224626,27.9753444033523,25.0555477040494,0,0,0,8.95440021228951,13.6312409193964,15.5168710759401,0,0,0,0,0,0,0,0,0,0,26.381043922034,41.0813161713462,48.4130448694966,5.5994568650145,25.8754615856949,0,0,0,0.257259436035947,2.0057340795713,14.9544906760458,0.202316460859598,0,1.90149421051854,1.69422266034566,0.889294796111139,0,0,0,7.19040265244171,13.4476406862544,0,0.135005938331691,0.210324961351382,1.14260393761521,0.220868540951614,0.489963196859816,0.479227355091182,0,1.10115880999389,1.65993539510744,1.0752457327937,0.659431438650969,0.731901148819277,1.04182674111352,1.95428099300967,0.56276261003168,0.916789486660861,0.589257170947335,0.711858403995515,1.1183966749518,0,0,27.5371264266594,0.860423876981386,0,0,0,0,5.33688796500657,0,0,0,2.39433813620357,0,0,0,1.29894624606728,2.78695852022608,2.02209778005913,10.3907330544345,0,0.29688427812965,0.520455980298408,0.913396434936424,0,0.301445281105245,0.352766121407114,0.125666591329675,26.6970565153124,1.01219549843938,0,0.647067399789637,0.220841518460394,0,37.2783522436244,0.878342391034642,1.8850203613211,48.5368404896324,0,0,0,2.24685959107234,1.37250180845588,0.125654352112864,1.04294592115366,0,1.87009240103604,1.1356888414743,1.62942982160506,3.6078021476927,9.85618757891331,10.1012090825508,0.260240885925407,1.14951052216736,1.26043490863744,1.65775299619287,0.680364991513279,0.640568601424249,0.468508622798644,6.98499100995342,0.215567992932842,1.32374256117473,1.23165786914764,1.31517439456545,0.834141747676794,2.78601733217733,1.64625709126355,2.7864797354589,0,0,0,4.76389276831654,6.56672967947069,5.94204802821349,8.75955521665278,12.0026181365916,8.17615698303105,11.39416329277,18.7791380979733,22.068649707395,16.1268652915211,16.0884114797513,15.727349051896,12.4269989311532,13.6121071480451,11.541752013392,1.89260953707715,1.02904612379284,104.081916639896,41.5187389661764,2.77274725695804,1.39342003116263,1.9330119198314,3.63030344322017,2.89091456998331,5.89699440948933,28.4717436926707,5.27036655116835,16.3367885720175,15.3196483471686,17.9366960149591,28.7622210769351,36.3111923789486,34.6505815462599,1.51734320762465,3.19895835307241,7.88954149711563,6.51684249105006,7.95205197387266,8.27602674705759,13.9120381673366,19.9273699772463,17.583857518234,11.105744752962,0.889357881261447,0.500535317148282,0.589676985339609,0.674586337154561,0.202860121388503,0.241177159752417,1.01850340712568,1.72617682470486,1.13494658742525,0.549122826376163,1.43768206527355,0.372140947668503,1.24815069245824,0.505157755894224,0.717589654087649,0.964887042726734,26.2349530036579,0.568474235311454,1.62964976442026,3.22515662972857,5.16318546234705,9.21284415929987,12.3782693260727,16.7814937157707,11.8226358079643,9.30151696524855,9.72674088810671,16.0586048421423,13.8147985492716,16.6346417368738,0,0,4.91764273019036,9.65778612066564,3.21101179975584,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,15.6134093729095,1.24645922567079,2.44330439030364,15.6721616823909,13.2745138339963,3.8844901784797,3.02323556964751,4.90373207365335,5.61073596473468,6.45613810682248,8.78656196771952,6.5436071305951,8.19943970284859,10.1131762539461,18.9753495434998,11.3449097573006,8.17055053809091,1.08036656418786,1.81102157295856,1.71469628025274,1.06404140185364,1.60531935841864,1.81003922662333,1.8267896946876,0.23467170806371,3.1774810629573,52.4857587370809,0.49465875882444,0.807322133479528,0.422190474497091,0.716234064018819,1.96969079694074,32.6458537025433,5.37733375830478,0.854354403989263,2.27025554759545,3.33350149265481,0.188368457004691,0.546776910884101,0.457556346413045,0.169978429993855,0,0,27.6854479224383,3.32152793260192,1.82987520414164,2.70013352054503,4.39085421630384,9.82631536857799,10.6542833644008,10.4969888771177,29.0549095602273,16.2018716614741,27.9602690889117,7.32800820289447,1.49516546043979,1.15820943319968,1.36115831840833,0.774958940866387,0.168956125490778,0.58678619322877,0.5208175393758,0.209718688851422,3.14059357073808,5.18454011264158,0.316011120628178,0,0,0.25984164595559,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0,0.116876902181569,3.62768613784338,2.88581739386284,0.538283139656854,0.335769232728157,1.54551675225752,2.25218970541418,6.22715522508701,1.07184189539533,36.1131914905462,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,1.3492355185943,3.19219898720825,0.853668028770671,2.67417388775123,1.46729213839588,1.2869045591501,2.66696073361938,2.67845574410562,2.56735367673452,2.52697211763797,3.04175159868288,1.50901073108861,2.52832070168682,1.98477972455095,2.41228969613576,1.90517476513229,2.43357084484197,1.54327376370964,1.23625770240992,2.64958056241915,1.71434626192708,1.59728225543404,1.90748951957857,1.45346416632329,2.72917203204459,2.96151127620868,2.19513567447327,3.15683653725411,1.08643291076689,1.12228454331548,1.89816028998679,1.0835493061312,2.45538625901814,1.70430525304563,1.54325288784913,1.49886346762768,1.16965804222704,3.65280791882107,0.382576664137687,0.220591419119515,0.231867835620421
|phase1_expression=1.44133962394315,105.041597699448,99.1898341869189,62.9125559518207,72.128985112274,72.0202076502007,63.542638241983,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71841992193451,0,0,31.1985224447143,28.2173415712619,66.6109078373423,35.7532456812032,48.481027354325,48.0759251224626,27.9753444033523,25.0555477040494,0,0,0,8.95440021228951,13.6312409193964,15.5168710759401,0,0,0,0,0,0,0,0,0,0,26.381043922034,41.0813161713462,48.4130448694966,5.5994568650145,25.8754615856949,0,0,0,0.257259436035947,2.0057340795713,14.9544906760458,0.202316460859598,0,1.90149421051854,1.69422266034566,0.889294796111139,0,0,0,7.19040265244171,13.4476406862544,0,0.135005938331691,0.210324961351382,1.14260393761521,0.220868540951614,0.489963196859816,0.479227355091182,0,1.10115880999389,1.65993539510744,1.0752457327937,0.659431438650969,0.731901148819277,1.04182674111352,1.95428099300967,0.56276261003168,0.916789486660861,0.589257170947335,0.711858403995515,1.1183966749518,0,0,27.5371264266594,0.860423876981386,0,0,0,0,5.33688796500657,0,0,0,2.39433813620357,0,0,0,1.29894624606728,2.78695852022608,2.02209778005913,10.3907330544345,0,0.29688427812965,0.520455980298408,0.913396434936424,0,0.301445281105245,0.352766121407114,0.125666591329675,26.6970565153124,1.01219549843938,0,0.647067399789637,0.220841518460394,0,37.2783522436244,0.878342391034642,1.8850203613211,48.5368404896324,0,0,0,2.24685959107234,1.37250180845588,0.125654352112864,1.04294592115366,0,1.87009240103604,1.1356888414743,1.62942982160506,3.6078021476927,9.85618757891331,10.1012090825508,0.260240885925407,1.14951052216736,1.26043490863744,1.65775299619287,0.680364991513279,0.640568601424249,0.468508622798644,6.98499100995342,0.215567992932842,1.32374256117473,1.23165786914764,1.31517439456545,0.834141747676794,2.78601733217733,1.64625709126355,2.7864797354589,0,0,0,4.76389276831654,6.56672967947069,5.94204802821349,8.75955521665278,12.0026181365916,8.17615698303105,11.39416329277,18.7791380979733,22.068649707395,16.1268652915211,16.0884114797513,15.727349051896,12.4269989311532,13.6121071480451,11.541752013392,1.89260953707715,1.02904612379284,104.081916639896,41.5187389661764,2.77274725695804,1.39342003116263,1.9330119198314,3.63030344322017,2.89091456998331,5.89699440948933,28.4717436926707,5.27036655116835,16.3367885720175,15.3196483471686,17.9366960149591,28.7622210769351,36.3111923789486,34.6505815462599,1.51734320762465,3.19895835307241,7.88954149711563,6.51684249105006,7.95205197387266,8.27602674705759,13.9120381673366,19.9273699772463,17.583857518234,11.105744752962,0.889357881261447,0.500535317148282,0.589676985339609,0.674586337154561,0.202860121388503,0.241177159752417,1.01850340712568,1.72617682470486,1.13494658742525,0.549122826376163,1.43768206527355,0.372140947668503,1.24815069245824,0.505157755894224,0.717589654087649,0.964887042726734,26.2349530036579,0.568474235311454,1.62964976442026,3.22515662972857,5.16318546234705,9.21284415929987,12.3782693260727,16.7814937157707,11.8226358079643,9.30151696524855,9.72674088810671,16.0586048421423,13.8147985492716,16.6346417368738,0,0,4.91764273019036,9.65778612066564,3.21101179975584,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,15.6134093729095,1.24645922567079,2.44330439030364,15.6721616823909,13.2745138339963,3.8844901784797,3.02323556964751,4.90373207365335,5.61073596473468,6.45613810682248,8.78656196771952,6.5436071305951,8.19943970284859,10.1131762539461,18.9753495434998,11.3449097573006,8.17055053809091,1.08036656418786,1.81102157295856,1.71469628025274,1.06404140185364,1.60531935841864,1.81003922662333,1.8267896946876,0.23467170806371,3.1774810629573,52.4857587370809,0.49465875882444,0.807322133479528,0.422190474497091,0.716234064018819,1.96969079694074,32.6458537025433,5.37733375830478,0.854354403989263,2.27025554759545,3.33350149265481,0.188368457004691,0.546776910884101,0.457556346413045,0.169978429993855,0,0,27.6854479224383,3.32152793260192,1.82987520414164,2.70013352054503,4.39085421630384,9.82631536857799,10.6542833644008,10.4969888771177,29.0549095602273,16.2018716614741,27.9602690889117,7.32800820289447,1.49516546043979,1.15820943319968,1.36115831840833,0.774958940866387,0.168956125490778,0.58678619322877,0.5208175393758,0.209718688851422,3.14059357073808,5.18454011264158,0.316011120628178,0,0,0.25984164595559,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0,0.116876902181569,3.62768613784338,2.88581739386284,0.538283139656854,0.335769232728157,1.54551675225752,2.25218970541418,6.22715522508701,1.07184189539533,36.1131914905462,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,1.3492355185943,3.19219898720825,0.853668028770671,2.67417388775123,1.46729213839588,1.2869045591501,2.66696073361938,2.67845574410562,2.56735367673452,2.52697211763797,3.04175159868288,1.50901073108861,2.52832070168682,1.98477972455095,2.41228969613576,1.90517476513229,2.43357084484197,1.54327376370964,1.23625770240992,2.64958056241915,1.71434626192708,1.59728225543404,1.90748951957857,1.45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|short_description=p2@Shroom3
}}
}}

Latest revision as of 09:25, 26 September 2015

Short description:p2@Shroom3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Shroom3_5end
Coexpression cluster:MCL_coexpression_mm9:2203
Association with transcript: -6bp_to_ENSMUST00000113054_5end
EntrezGene:Shroom3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Shroom3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5105.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I699.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I362.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I472.13
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I772.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I863.54
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D131.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D228.22
GP2+ M cell, pool1.CNhs13228.11845-124H966.61
GP2+ M cell, pool2.CNhs13231.11846-124I135.75
GP2+ M cell, pool3.CNhs13240.11847-124I248.48
Ileum epithelium, pool1.CNhs13199.10252-104B948.08
Ileum epithelium, pool2.CNhs13232.10253-104C127.98
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C825.06
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.63
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.52
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C226.38
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B841.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C348.41
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.60
Mouse Astrocytes, donor3.CNhs12107.11633-122C425.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.95
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E813.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G327.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.39
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A826.70
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H437.28
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H748.54
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B29.86
eyeball, adult.CNhs10484.31-12G410.10
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.76
heart, embryo E12.CNhs11015.353-12F56.57
heart, embryo E13.CNhs11013.376-3I95.94
heart, embryo E14.CNhs10597.403-26D48.76
heart, embryo E15.CNhs11017.431-16C812.00
heart, embryo E16.CNhs11021.457-17C68.18
heart, embryo E17.CNhs11025.479-18E511.39
heart, embryo E18.CNhs11030.1283-20G318.78
heart, neonate N00.CNhs11213.639-21E322.07
heart, neonate N03.CNhs11221.1349-25I216.13
heart, neonate N10.CNhs11118.749-24G116.09
heart, neonate N16.CNhs11209.782-15G115.73
heart, neonate N20.CNhs11127.821-26I612.43
heart, neonate N25.CNhs11196.1351-25D313.61
heart, neonate N30.CNhs11202.1390-42D211.54
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I3104.08
intestine, adult.CNhs10496.178-9A341.52
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F75.90
intestine, neonate N00.CNhs11126.644-26D128.47
intestine, neonate N01.CNhs11192.1322-23E95.27
intestine, neonate N06.CNhs11102.688-20B816.34
intestine, neonate N07.CNhs11095.720-20F215.32
intestine, neonate N10.CNhs11098.755-23A517.94
intestine, neonate N20.CNhs11187.827-18D128.76
intestine, neonate N25.CNhs11121.1352-25E336.31
intestine, neonate N30.CNhs11131.1384-42G134.65
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F83.20
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I26.52
kidney, embryo E18.CNhs11001.1288-20C77.95
kidney, neonate N00.CNhs11214.646-21G78.28
kidney, neonate N10.CNhs11206.758-6D513.91
kidney, neonate N20.CNhs11113.832-19I119.93
kidney, neonate N25.CNhs11122.1353-25F317.58
kidney, neonate N30.CNhs11203.1385-42H111.11
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B126.23
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A69.21
lung, embryo E18.CNhs10583.1287-20I612.38
lung, neonate N00.CNhs11224.640-42C616.78
lung, neonate N06.CNhs11212.683-20E511.82
lung, neonate N07.CNhs11111.715-19A39.30
lung, neonate N10.CNhs11219.750-23E69.73
lung, neonate N20.CNhs11109.822-18A416.06
lung, neonate N25.CNhs11119.1359-25C713.81
lung, neonate N30.CNhs11133.1394-42H216.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H29.66
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I715.61
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G615.67
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E54.90
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I76.46
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G88.17
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F852.49
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I132.65
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H627.69
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D54.39
stomach, embryo E18.CNhs10999.1286-20C69.83
stomach, neonate N03.CNhs11193.1340-24B810.65
stomach, neonate N07.CNhs11210.718-18A910.50
stomach, neonate N25.CNhs11104.1355-25E429.05
stomach, neonate N30.CNhs11134.1386-42I116.20
submandibular gland, adult.CNhs10469.59-29C127.96
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E56.23
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F836.11
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell8.14e-079
epithelial cell of alimentary canal8.14e-079

Uber anatomy
Ontology termp-valuen
intestine1.97e-1531
gastrointestinal system9.24e-1547
mucosa1.61e-1015
intestinal mucosa2.54e-0913
wall of intestine2.54e-0913
gastrointestinal system mucosa2.54e-0913
compound organ1.79e-0743
epithelium of mucosa8.14e-079
gastrointestinal system epithelium8.14e-079
intestinal epithelium8.14e-079
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