FFCP PHASE1:Mm9::chr6:50211790..50211812,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:50211790..50211812,-
|short_description=p2@Dfna5
|description=CAGE_peak_2_at_Dfna5_5end
|association_with_transcript=-22bp_to_ENSMUST00000170142,NM_018769_...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=54722 | |EntrezGene=54722 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z2D3 | |UniProt=Q9Z2D3 | ||
|association_with_transcript=-22bp_to_ENSMUST00000170142,NM_018769_5end | |||
|cluster_id=chr6:50211790..50211812,- | |||
|description=CAGE_peak_2_at_Dfna5_5end | |||
|id=chr6:50211790..50211812,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.82e-18,6;CL:0000677,6.82e-18,6;CL:0000584,6.82e-18,6;CL:0000075,2.88e-15,7;CL:0002563,9.24e-12,9;CL:0002251,9.24e-12,9;CL:0000682,3.63e-10,3;CL:0000066,1.27e-08,25;CL:0002076,7.70e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.44e-11,3;DOID:4045,2.44e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!9.77e-09!15;UBERON:0001242!2.95e-07!13;UBERON:0000060!2.95e-07!13;UBERON:0001262!2.95e-07!13;UBERON:0004786!2.95e-07!13;UBERON:0004923!5.84e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.15e-23,15;UBERON:0000160,7.74e-23,31;UBERON:0001242,1.95e-18,13;UBERON:0001262,1.95e-18,13;UBERON:0004786,1.95e-18,13;UBERON:0004923,4.92e-14,24;UBERON:0005409,5.66e-14,47;UBERON:0002108,6.96e-14,4;UBERON:0003350,9.24e-12,9;UBERON:0004808,9.24e-12,9;UBERON:0001277,9.24e-12,9;UBERON:0000331,5.66e-11,3;UBERON:0002116,5.66e-11,3;UBERON:0001204,5.66e-11,3;UBERON:0001168,5.66e-11,3;UBERON:0000485,1.59e-09,11;UBERON:0001962,3.05e-07,2;UBERON:0001961,3.05e-07,2;UBERON:0001744,3.05e-07,2 | |||
|phase1_expression=0,4.53668029931169,5.45999087267443,2.41971369045464,2.00358291978539,2.18243053485457,2.56973904655078,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,2.71987118748791,4.12936705920906,5.7423196411502,2.15380998079537,4.74036711908956,15.3918969759663,10.3332353201572,15.0776747245607,0,0,0,0,0.332469290716985,0,21.7636447983192,15.626706890476,25.1291397107423,24.7057224973026,22.5405010036287,28.6451108288381,0.125896817975577,0,0.550640256485045,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0,0.153606533256243,0.131886287730194,0,0.52091337055676,0.279182999001381,0,0.15279824777681,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,2.65383165584962,0,0.220841518460394,0.969750506270444,0,0.292780797011547,0,5.36459815938042,0,0,0,0.299581278809645,0.457500602818626,0.376963056338593,0,0,0,0.324482526135515,0.305518091550949,0.622034853050465,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.380451252225118,3.79623249235609,2.47048432086016,0.754005626400808,0.795825888164603,0.974820435595601,1.79763881730844,2.59365659849633,3.78368419183298,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0.442830443938806,0.156998727841375,0.493588655687202,0,0,0.393117990226406,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,0,0.372140947668503,0.624075346229121,0.252578877947112,0.358794827043824,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0.180938774784468,0.119372344003136,0,4.66369338607761,0,0.170870880797853,0.412773735926445,0.370389054739423,0.941842285023455,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.90730481304255,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0.231867835620421 | |phase1_expression=0,4.53668029931169,5.45999087267443,2.41971369045464,2.00358291978539,2.18243053485457,2.56973904655078,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,2.71987118748791,4.12936705920906,5.7423196411502,2.15380998079537,4.74036711908956,15.3918969759663,10.3332353201572,15.0776747245607,0,0,0,0,0.332469290716985,0,21.7636447983192,15.626706890476,25.1291397107423,24.7057224973026,22.5405010036287,28.6451108288381,0.125896817975577,0,0.550640256485045,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0,0.153606533256243,0.131886287730194,0,0.52091337055676,0.279182999001381,0,0.15279824777681,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,2.65383165584962,0,0.220841518460394,0.969750506270444,0,0.292780797011547,0,5.36459815938042,0,0,0,0.299581278809645,0.457500602818626,0.376963056338593,0,0,0,0.324482526135515,0.305518091550949,0.622034853050465,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.380451252225118,3.79623249235609,2.47048432086016,0.754005626400808,0.795825888164603,0.974820435595601,1.79763881730844,2.59365659849633,3.78368419183298,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0.442830443938806,0.156998727841375,0.493588655687202,0,0,0.393117990226406,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,0,0.372140947668503,0.624075346229121,0.252578877947112,0.358794827043824,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0.180938774784468,0.119372344003136,0,4.66369338607761,0,0.170870880797853,0.412773735926445,0.370389054739423,0.941842285023455,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.90730481304255,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0.231867835620421 | ||
|short_description=p2@Dfna5 | |||
}} | }} |
Latest revision as of 12:17, 1 October 2015
Short description: | p2@Dfna5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dfna5_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -22bp_to_ENSMUST00000170142, NM_018769_5end |
EntrezGene: | Dfna5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.82e-18 | 6 |
gut absorptive cell | 6.82e-18 | 6 |
enterocyte | 6.82e-18 | 6 |
columnar/cuboidal epithelial cell | 2.88e-15 | 7 |
intestinal epithelial cell | 9.24e-12 | 9 |
epithelial cell of alimentary canal | 9.24e-12 | 9 |
M cell of gut | 3.63e-10 | 3 |
epithelial cell | 1.27e-08 | 25 |
endo-epithelial cell | 7.70e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.15e-23 | 15 |
intestine | 7.74e-23 | 31 |
intestinal mucosa | 1.95e-18 | 13 |
wall of intestine | 1.95e-18 | 13 |
gastrointestinal system mucosa | 1.95e-18 | 13 |
organ component layer | 4.92e-14 | 24 |
gastrointestinal system | 5.66e-14 | 47 |
small intestine | 6.96e-14 | 4 |
epithelium of mucosa | 9.24e-12 | 9 |
gastrointestinal system epithelium | 9.24e-12 | 9 |
intestinal epithelium | 9.24e-12 | 9 |
ileal mucosa | 5.66e-11 | 3 |
ileum | 5.66e-11 | 3 |
mucosa of small intestine | 5.66e-11 | 3 |
wall of small intestine | 5.66e-11 | 3 |
simple columnar epithelium | 1.59e-09 | 11 |
gut-associated lymphoid tissue | 3.05e-07 | 2 |
mucosa-associated lymphoid tissue | 3.05e-07 | 2 |
lymphoid tissue | 3.05e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.44e-11 | 3 |
muscle cancer | 2.44e-11 | 3 |