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FFCP PHASE1:Mm9::chr6:60778883..60778894,-: Difference between revisions

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(Created page with "{{FFCP |id=chr6:60778883..60778894,- |short_description=p3@Snca |description=CAGE_peak_3_at_Snca_5end |association_with_transcript=95bp_to_ENSMUST00000114268,NM_001042451,...")
 
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{{FFCP
{{FFCP
|id=chr6:60778883..60778894,-
|DHSsupport=NA
|short_description=p3@Snca
|DPIdataset=NA
|description=CAGE_peak_3_at_Snca_5end
|association_with_transcript=95bp_to_ENSMUST00000114268,NM_001042451,uc009cdn.1,uc009cdp.1_5end
|EntrezGene=20617
|EntrezGene=20617
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=O55042
|UniProt=O55042
|association_with_transcript=95bp_to_ENSMUST00000114268,NM_001042451,uc009cdn.1,uc009cdp.1_5end
|cluster_id=chr6:60778883..60778894,-
|description=CAGE_peak_3_at_Snca_5end
|id=chr6:60778883..60778894,-
|ontology_enrichment_celltype=CL:0000117!1.24e-10!23;CL:0000337!1.24e-10!23;CL:0000540!6.31e-08!33;CL:0000047!6.31e-08!33;CL:0000031!6.31e-08!33;CL:0000404!6.31e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,6.62e-12,23;CL:0000337,6.62e-12,23;CL:0000540,6.53e-07,33;CL:0000047,6.53e-07,33;CL:0000031,6.53e-07,33;CL:0000404,6.53e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!6.18e-16!34;UBERON:0001049!5.84e-15!52;UBERON:0005068!5.84e-15!52;UBERON:0006241!5.84e-15!52;UBERON:0007135!5.84e-15!52;UBERON:0001017!1.00e-14!73;UBERON:0005743!1.00e-14!73;UBERON:0000955!1.46e-14!50;UBERON:0006238!1.46e-14!50;UBERON:0000073!2.00e-14!75;UBERON:0001016!2.00e-14!75;UBERON:0002616!5.56e-14!49;UBERON:0002791!8.41e-13!29;UBERON:0003528!8.41e-13!29;UBERON:0001893!8.41e-13!29;UBERON:0000025!5.08e-12!114;UBERON:0002346!1.02e-11!71;UBERON:0003075!1.02e-11!71;UBERON:0007284!1.02e-11!71;UBERON:0003080!3.41e-11!40;UBERON:0002780!8.76e-11!39;UBERON:0001890!8.76e-11!39;UBERON:0006240!8.76e-11!39;UBERON:0000033!1.90e-10!63;UBERON:0004121!6.21e-10!102;UBERON:0000924!6.21e-10!102;UBERON:0006601!6.21e-10!102;UBERON:0004111!1.19e-09!122;UBERON:0003056!2.61e-09!49;UBERON:0002021!5.54e-09!10;UBERON:0000411!5.54e-09!10;UBERON:0001950!5.54e-09!10;UBERON:0000956!1.05e-08!21;UBERON:0001869!1.05e-08!21;UBERON:0000203!1.05e-08!21;UBERON:0002619!3.68e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.88e-24,54;UBERON:0002020,2.68e-22,34;UBERON:0001049,5.09e-20,52;UBERON:0005068,5.09e-20,52;UBERON:0006241,5.09e-20,52;UBERON:0007135,5.09e-20,52;UBERON:0001017,4.20e-19,73;UBERON:0001016,2.86e-18,75;UBERON:0003528,7.09e-17,29;UBERON:0002791,7.09e-17,29;UBERON:0001893,7.09e-17,29;UBERON:0000955,1.18e-16,47;UBERON:0006238,1.18e-16,47;UBERON:0002616,9.93e-16,46;UBERON:0002021,3.56e-15,10;UBERON:0000411,3.56e-15,10;UBERON:0001950,3.56e-15,10;UBERON:0002346,2.36e-14,64;UBERON:0003075,2.36e-14,64;UBERON:0007284,2.36e-14,64;UBERON:0003080,4.96e-14,40;UBERON:0002780,2.40e-13,39;UBERON:0001890,2.40e-13,39;UBERON:0006240,2.40e-13,39;UBERON:0004121,6.04e-12,95;UBERON:0000924,6.04e-12,95;UBERON:0006601,6.04e-12,95;UBERON:0000025,1.95e-11,114;UBERON:0010371,2.22e-11,73;UBERON:0002619,4.57e-11,17;UBERON:0003056,4.11e-10,49;UBERON:0000956,6.75e-10,21;UBERON:0001869,6.75e-10,21;UBERON:0000203,6.75e-10,21;UBERON:0004111,7.00e-10,122;UBERON:0002420,8.54e-09,8;UBERON:0007245,8.54e-09,8;UBERON:0010009,8.54e-09,8;UBERON:0010011,8.54e-09,8;UBERON:0000454,8.54e-09,8;UBERON:0010314,2.20e-08,92;UBERON:0011216,1.26e-07,194;UBERON:0001948,4.75e-07,5;UBERON:0002315,4.75e-07,5;UBERON:0003076,7.56e-07,12;UBERON:0003057,7.56e-07,12
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,5.3297561890506,6.07425802169478,6.99561878128147,0.157731082679119,0.411343300817216,0.84877930359606,1.78590909317247,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0.675029691658453,0.420649922702764,5.71301968807607,7.73039893330647,0.367472397644862,0.766763768145891,0.919218786610021,5.50579404996943,7.2781782708557,6.14426133024974,1.05509030184155,1.9212405156506,1.56274011167028,2.23346399201105,5.6276261003168,8.40390362772456,5.59794312399969,5.69486723196412,2.05039390407831,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0.376999773989026,0,0.578397427679647,3.5384422077995,0.161766849947409,2.42925670306433,0.969750506270444,0,1.17112318804619,1.46612694769419,0,0,0,0,1.64769703345305,3.66000482254901,2.89005009859588,7.47444576826789,6.64860189058859,1.87009240103604,4.2182728397617,0.203678727700633,0.995255764880744,0,0,0,0.229902104433473,0.180062129805349,0.30140963567143,0.204109497453984,0.12811372028485,0.374806898238915,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.729619285912702,0.877199924551994,1.09775057645525,2.01309628140558,7.14985825118033,2.57261530948211,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,1.83529616287703,1.57247196090562,3.59779379815766,3.04290182082754,3.13530307678142,2.29163266603278,2.87696137450811,0.972811360650212,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0.975668239288994,0.630540576424764,0.44292937929755,0.478364305972461,2.13022309130459,1.89953480052485,2.16973587872267,0,0,0.491764273019036,0,1.44495530989013,2.57865710502847,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0,4.81981974632711,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0.428674070063185,0,0.535106452806212,0.329098041204242,0,0,0.42366414172764,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,3.2465467351592,0,1.11116716421827,5.27431679613135,2.59719032669948,6.17701067657611,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.41326727862668,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,12.4245405375755,13.3494318587081,16.6139698897425,16.3260523226503,12.3314853558716,11.3309084608455,12.8254275044043,12.6089936902782,7.25027854374727,14.497288729051,0.207574695168353,0,0.682934423016537,0.486213434136588,0.628839487883947,1.83843508450014,0.666740183404846,0.824140228955577,2.24643446714271,1.01078884705519,0,0.188626341386076,1.03005658216871,0.960377286073039,0.804096565378586,1.90517476513229,0.927074607558844,1.35036454324594,0.824171801606613,1.17759136107518,1.37147700954166,0.70990322463735,2.62279808942053,1.16277133305863,0.564656282491984,0.592302255241736,0.73171189149109,0.263069711437843,0.814824683075171,2.80571135828869,0.593175090620871,0.492522411877817,0.818462086339379,0.464810523557898,0.578719832943424,0.749431733813838,0.701794825336225,0.214871054048298,0.382576664137687,1.32354851471709,0.695603506861264
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,5.3297561890506,6.07425802169478,6.99561878128147,0.157731082679119,0.411343300817216,0.84877930359606,1.78590909317247,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0.675029691658453,0.420649922702764,5.71301968807607,7.73039893330647,0.367472397644862,0.766763768145891,0.919218786610021,5.50579404996943,7.2781782708557,6.14426133024974,1.05509030184155,1.9212405156506,1.56274011167028,2.23346399201105,5.6276261003168,8.40390362772456,5.59794312399969,5.69486723196412,2.05039390407831,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0.376999773989026,0,0.578397427679647,3.5384422077995,0.161766849947409,2.42925670306433,0.969750506270444,0,1.17112318804619,1.46612694769419,0,0,0,0,1.64769703345305,3.66000482254901,2.89005009859588,7.47444576826789,6.64860189058859,1.87009240103604,4.2182728397617,0.203678727700633,0.995255764880744,0,0,0,0.229902104433473,0.180062129805349,0.30140963567143,0.204109497453984,0.12811372028485,0.374806898238915,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.729619285912702,0.877199924551994,1.09775057645525,2.01309628140558,7.14985825118033,2.57261530948211,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,1.83529616287703,1.57247196090562,3.59779379815766,3.04290182082754,3.13530307678142,2.29163266603278,2.87696137450811,0.972811360650212,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0.975668239288994,0.630540576424764,0.44292937929755,0.478364305972461,2.13022309130459,1.89953480052485,2.16973587872267,0,0,0.491764273019036,0,1.44495530989013,2.57865710502847,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0,4.81981974632711,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0.428674070063185,0,0.535106452806212,0.329098041204242,0,0,0.42366414172764,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,3.2465467351592,0,1.11116716421827,5.27431679613135,2.59719032669948,6.17701067657611,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.41326727862668,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,12.4245405375755,13.3494318587081,16.6139698897425,16.3260523226503,12.3314853558716,11.3309084608455,12.8254275044043,12.6089936902782,7.25027854374727,14.497288729051,0.207574695168353,0,0.682934423016537,0.486213434136588,0.628839487883947,1.83843508450014,0.666740183404846,0.824140228955577,2.24643446714271,1.01078884705519,0,0.188626341386076,1.03005658216871,0.960377286073039,0.804096565378586,1.90517476513229,0.927074607558844,1.35036454324594,0.824171801606613,1.17759136107518,1.37147700954166,0.70990322463735,2.62279808942053,1.16277133305863,0.564656282491984,0.592302255241736,0.73171189149109,0.263069711437843,0.814824683075171,2.80571135828869,0.593175090620871,0.492522411877817,0.818462086339379,0.464810523557898,0.578719832943424,0.749431733813838,0.701794825336225,0.214871054048298,0.382576664137687,1.32354851471709,0.695603506861264
|short_description=p3@Snca
}}
}}

Latest revision as of 15:05, 1 October 2015

Short description:p3@Snca
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Snca_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 95bp_to_ENSMUST00000114268, NM_001042451, uc009cdn.1, uc009cdp.1_5end
EntrezGene:Snca
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Snca

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D57.47
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E87.15
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D15.27
spleen, neonate N20.CNhs11112.824-19H12.60
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.61
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.62e-1223
neuroblast (sensu Vertebrata)6.62e-1223
neuron6.53e-0733
neuronal stem cell6.53e-0733
neuroblast6.53e-0733
electrically signaling cell6.53e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.88e-2454
gray matter2.68e-2234
neural tube5.09e-2052
neural rod5.09e-2052
future spinal cord5.09e-2052
neural keel5.09e-2052
central nervous system4.20e-1973
nervous system2.86e-1875
brain grey matter7.09e-1729
regional part of telencephalon7.09e-1729
telencephalon7.09e-1729
brain1.18e-1647
future brain1.18e-1647
regional part of brain9.93e-1646
occipital lobe3.56e-1510
visual cortex3.56e-1510
neocortex3.56e-1510
neurectoderm2.36e-1464
neural plate2.36e-1464
presumptive neural plate2.36e-1464
anterior neural tube4.96e-1440
regional part of forebrain2.40e-1339
forebrain2.40e-1339
future forebrain2.40e-1339
ectoderm-derived structure6.04e-1295
ectoderm6.04e-1295
presumptive ectoderm6.04e-1295
tube1.95e-11114
ecto-epithelium2.22e-1173
regional part of cerebral cortex4.57e-1117
pre-chordal neural plate4.11e-1049
cerebral cortex6.75e-1021
cerebral hemisphere6.75e-1021
pallium6.75e-1021
anatomical conduit7.00e-10122
basal ganglion8.54e-098
nuclear complex of neuraxis8.54e-098
aggregate regional part of brain8.54e-098
collection of basal ganglia8.54e-098
cerebral subcortex8.54e-098
structure with developmental contribution from neural crest2.20e-0892
organ system subdivision1.26e-07194
regional part of spinal cord4.75e-075
gray matter of spinal cord4.75e-075
posterior neural tube7.56e-0712
chordal neural plate7.56e-0712
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