FFCP PHASE1:Mm9::chr8:29761642..29761646,-: Difference between revisions
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|id=chr8:29761642..29761646,-
|short_description=p@chr8:29761642..29761646,-
|description=CAGE_peak_at_chr8:29761642..29761646,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:29761642..29761646,- | |||
|description=CAGE_peak_at_chr8:29761642..29761646,- | |||
|id=chr8:29761642..29761646,- | |||
|ontology_enrichment_celltype=CL:0000117!5.58e-22!23;CL:0000337!5.58e-22!23;CL:0000540!5.29e-18!33;CL:0000047!5.29e-18!33;CL:0000031!5.29e-18!33;CL:0000404!5.29e-18!33;CL:0000393!2.00e-14!39;CL:0000211!2.00e-14!39;CL:0002319!1.33e-12!43;CL:0000221!3.35e-12!44;CL:0000133!3.35e-12!44;CL:0000055!3.93e-10!50;CL:0002609!4.68e-09!6;CL:0002614!6.08e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,5.66e-27,6;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002612,4.17e-07,3;CL:0002608,4.77e-07,3;CL:0000120,5.46e-07,3;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.16e-19!34;UBERON:0001049!4.41e-19!52;UBERON:0005068!4.41e-19!52;UBERON:0006241!4.41e-19!52;UBERON:0007135!4.41e-19!52;UBERON:0001017!1.88e-18!73;UBERON:0005743!1.88e-18!73;UBERON:0000073!9.62e-18!75;UBERON:0001016!9.62e-18!75;UBERON:0002616!4.92e-15!49;UBERON:0003080!9.28e-15!40;UBERON:0000955!1.30e-14!50;UBERON:0006238!1.30e-14!50;UBERON:0002791!3.26e-14!29;UBERON:0003528!3.26e-14!29;UBERON:0001893!3.26e-14!29;UBERON:0002780!9.97e-14!39;UBERON:0001890!9.97e-14!39;UBERON:0006240!9.97e-14!39;UBERON:0002346!3.06e-13!71;UBERON:0003075!3.06e-13!71;UBERON:0007284!3.06e-13!71;UBERON:0000033!9.36e-13!63;UBERON:0003056!2.60e-12!49;UBERON:0004121!7.69e-12!102;UBERON:0000924!7.69e-12!102;UBERON:0006601!7.69e-12!102;UBERON:0002420!2.37e-08!8;UBERON:0007245!2.37e-08!8;UBERON:0010009!2.37e-08!8;UBERON:0010011!2.37e-08!8;UBERON:0000454!2.37e-08!8;UBERON:0002950!3.48e-08!4;UBERON:0001891!3.48e-08!4;UBERON:0009616!3.48e-08!4;UBERON:0000153!4.06e-08!94;UBERON:0000956!6.37e-08!21;UBERON:0001869!6.37e-08!21;UBERON:0000203!6.37e-08!21;UBERON:0002298!9.93e-08!6;UBERON:0007811!1.12e-07!86;UBERON:0002038!6.08e-07!3;UBERON:0002308!6.08e-07!3;UBERON:0009663!6.08e-07!3;UBERON:0009661!6.08e-07!3;UBERON:0006331!6.08e-07!3;UBERON:0000125!6.08e-07!3;UBERON:0001948!8.14e-07!5;UBERON:0002315!8.14e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.61e-09,34;UBERON:0000956,2.58e-08,21;UBERON:0001869,2.58e-08,21;UBERON:0000203,2.58e-08,21;UBERON:0002257,4.17e-07,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,2.59224030771194,0.810035629990144,2.10324961351382,0.571301968807607,0.662605622854841,1.10241719293459,0.383381884072945,0,0,0.127687338085188,0,0.527545150920775,0.182975287204819,0,0.837548997004143,0.56276261003168,0.61119299110724,0,0.284743361598206,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0.376963056338593,0,0.511430914660661,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0.809621403349789,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68741272937475,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0.532427418478012,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,2.59224030771194,0.810035629990144,2.10324961351382,0.571301968807607,0.662605622854841,1.10241719293459,0.383381884072945,0,0,0.127687338085188,0,0.527545150920775,0.182975287204819,0,0.837548997004143,0.56276261003168,0.61119299110724,0,0.284743361598206,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0.376963056338593,0,0.511430914660661,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0.809621403349789,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68741272937475,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0.532427418478012,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr8:29761642..29761646,- | |||
}} | }} |
Latest revision as of 07:56, 6 August 2015
Short description: | p@chr8:29761642..29761646, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:29761642..29761646, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 5.66e-27 | 6 |
CNS neuron (sensu Vertebrata) | 1.61e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-19 | 23 |
neuron | 8.03e-14 | 33 |
neuronal stem cell | 8.03e-14 | 33 |
neuroblast | 8.03e-14 | 33 |
electrically signaling cell | 8.03e-14 | 33 |
electrically responsive cell | 8.52e-12 | 39 |
electrically active cell | 8.52e-12 | 39 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
neuron of the ventral spinal cord | 4.17e-07 | 3 |
hippocampal neuron | 4.77e-07 | 3 |
granule cell | 5.46e-07 | 3 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
gray matter | 6.61e-09 | 34 |
cerebral cortex | 2.58e-08 | 21 |
cerebral hemisphere | 2.58e-08 | 21 |
pallium | 2.58e-08 | 21 |
ventral horn of spinal cord | 4.17e-07 | 3 |