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{{UBERON
{{UBERON
|id=UBERON:0001915
|alt_id=UBERON:FMA_62114-MA_0000711
|name=endothelium of capillary
|namespace=
|def="An endothelium that is part of a capillary [Obol]." [OBOL:automatic]
|xref=BTO:0004954;;FMA:62114;;MA:0000711;;ncithesaurus:Capillary_Endothelium
|is_a=UBERON:0001986;;UBERON:0004638
|synonym="blood capillary endothelium" EXACT [OBOL:automatic];;"capillary endothelium" EXACT [];;"capillary vessel endothelium" EXACT [OBOL:automatic];;"endothelium of blood capillary" EXACT [OBOL:automatic];;"endothelium of capillary vessel" EXACT [OBOL:automatic]
|comment=This class was created automatically from a combination of ontologies
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_62114-MA_0000711
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An endothelium that is part of a capillary [Obol]." [OBOL:automatic]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0001915
|is_a=UBERON:0004638
|is_obsolete=
|located_in=
|located_in=
|name=endothelium of capillary
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001982
|part_of=UBERON:0001982
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym="blood capillary endothelium" EXACT [OBOL:automatic];;"capillary endothelium" EXACT [];;"capillary vessel endothelium" EXACT [OBOL:automatic];;"endothelium of blood capillary" EXACT [OBOL:automatic];;"endothelium of capillary vessel" EXACT [OBOL:automatic]
|union_of=
|xref=BTO:0004954;;FMA:62114;;MA:0000711;;ncithesaurus:Capillary_Endothelium
}}
}}

Latest revision as of 17:23, 12 September 2014

Name:endothelium of capillary
Namespace:FANTOM
Definition:"An endothelium that is part of a capillary [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0004954
FMA:62114
MA:0000711

ncithesaurus:Capillary_Endothelium
Synonyms: "blood capillary endothelium" EXACT [OBOL:automatic]
"capillary endothelium" EXACT []
"capillary vessel endothelium" EXACT [OBOL:automatic]
"endothelium of blood capillary" EXACT [OBOL:automatic]
"endothelium of capillary vessel" EXACT [OBOL:automatic]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_62114-MA_0000711

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004638(blood vessel endothelium)
part_of:UBERON:0001982(capillary)



Children

part of:CL:0002144 (capillary endothelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 11265-116G5 (Endothelial Cells - Microvascular, donor1)
  • 11342-117G1 (Endothelial Cells - Microvascular, donor2)
  • 11414-118F1 (Endothelial Cells - Microvascular, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001915 (endothelium of capillary), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.06e-99FFCP PHASE1:Hg19::chr15:65935283..65935297,+#_f825d53efc689f379de6124099b8d01dp11@SLC24A1
4.06e-99FFCP PHASE2:Hg19::chr15:65935283..65935297,+#_f825d53efc689f379de6124099b8d01dp11@SLC24A1
6.24e-88FFCP PHASE2:Hg19::chr12:6161828..6161837,-#_dc37c32da1b6a575f0a7e794b7ad5874p@chr12:6161828..6161837, -
6.24e-88FFCP PHASE1:Hg19::chr12:6161828..6161837,-#_dc37c32da1b6a575f0a7e794b7ad5874p@chr12:6161828..6161837, -
9.74e-88FFCP PHASE2:Hg19::chr13:102379103..102379108,-#_f3572a7a39edfae8f4da198dbc3dd759p@chr13:102379103..102379108, -
9.74e-88FFCP PHASE1:Hg19::chr13:102379103..102379108,-#_f3572a7a39edfae8f4da198dbc3dd759p@chr13:102379103..102379108, -
2.28e-85FFCP PHASE2:Hg19::chr1:214453986..214454002,+#_fff3658df3afbeb066a8c99027e46e4dp10@SMYD2
2.28e-85FFCP PHASE1:Hg19::chr1:214453986..214454002,+#_fff3658df3afbeb066a8c99027e46e4dp10@SMYD2
3.04e-85FFCP PHASE2:Hg19::chr11:108743594..108743616,+#_d37e4f7ac59847a86cabb5309b5aa418p@chr11:108743594..108743616, +
3.04e-85FFCP PHASE1:Hg19::chr11:108743594..108743616,+#_d37e4f7ac59847a86cabb5309b5aa418p@chr11:108743594..108743616, +
7.21e-85FFCP PHASE2:Hg19::chr1:94526344..94526353,-#_f5b68fe6b155ccd39b6bc591468494dep4@ABCA4
7.21e-85FFCP PHASE1:Hg19::chr1:94526344..94526353,-#_f5b68fe6b155ccd39b6bc591468494dep4@ABCA4
1.28e-84FFCP PHASE2:Hg19::chr9:13446440..13446456,+#_126dea3522a06096fa7f7e9f9ddfb367p2@ENST00000428006
1.28e-84FFCP PHASE1:Hg19::chr9:13446440..13446456,+#_126dea3522a06096fa7f7e9f9ddfb367p2@ENST00000428006
2.27e-84FFCP PHASE2:Hg19::chr18:54339823..54339834,+#_f32a21e4080af9d00fd7b9de6d8fbd67p8@WDR7
2.27e-84FFCP PHASE1:Hg19::chr18:54339823..54339834,+#_f32a21e4080af9d00fd7b9de6d8fbd67p8@WDR7
3.03e-84FFCP PHASE1:Hg19::chr7:79998842..79998855,+#_7ba19184f23445c876f4f891900befdcp25@CD36
3.03e-84FFCP PHASE2:Hg19::chr7:79998842..79998855,+#_7ba19184f23445c876f4f891900befdcp25@CD36
4.55e-74FFCP PHASE1:Hg19::chr4:38057520..38057536,-#_91fa672d04fd9a25b3960a95b0bccb1cp@chr4:38057520..38057536, -
4.55e-74FFCP PHASE2:Hg19::chr4:38057520..38057536,-#_91fa672d04fd9a25b3960a95b0bccb1cp@chr4:38057520..38057536, -
5.01e-67FFCP PHASE1:Hg19::chr20:62679771..62679782,-#_cab8063bc62370273bfcd0a1157ce367p4@SOX18
5.01e-67FFCP PHASE2:Hg19::chr20:62679771..62679782,-#_cab8063bc62370273bfcd0a1157ce367p4@SOX18
2.39e-66FFCP PHASE1:Hg19::chr2:122514086..122514090,+#_477e06f780b29164229ccc3cf94e91b3p5@TSN
2.39e-66FFCP PHASE2:Hg19::chr2:122514086..122514090,+#_477e06f780b29164229ccc3cf94e91b3p5@TSN
2.39e-66FFCP PHASE2:Hg19::chr17:54893310..54893315,-#_477e06f780b29164229ccc3cf94e91b3p15@C17orf67
2.39e-66FFCP PHASE1:Hg19::chr17:54893310..54893315,-#_477e06f780b29164229ccc3cf94e91b3p15@C17orf67
1.33e-60FFCP PHASE2:Hg19::chr3:30560333..30560348,+#_6dca01310f1d9beff47c85ec8e633b10p@chr3:30560333..30560348, +
1.33e-60FFCP PHASE1:Hg19::chr3:30560333..30560348,+#_6dca01310f1d9beff47c85ec8e633b10p@chr3:30560333..30560348, +
1.51e-54FFCP PHASE2:Hg19::chr2:56149828..56149839,-#_5145597721a8fded57daf95c928f7ec3p17@EFEMP1
1.51e-54FFCP PHASE1:Hg19::chr2:56149828..56149839,-#_5145597721a8fded57daf95c928f7ec3p17@EFEMP1
2.87e-53FFCP PHASE1:Hg19::chr5:106837881..106837888,-#_8598f7263d09e3d32153d6fec8aa5568p@chr5:106837881..106837888, -
2.87e-53FFCP PHASE2:Hg19::chr2:73311401..73311431,-#_8598f7263d09e3d32153d6fec8aa5568p17@RAB11FIP5
2.87e-53FFCP PHASE1:Hg19::chr2:73311401..73311431,-#_8598f7263d09e3d32153d6fec8aa5568p17@RAB11FIP5
2.87e-53FFCP PHASE2:Hg19::chr5:106837881..106837888,-#_8598f7263d09e3d32153d6fec8aa5568p@chr5:106837881..106837888, -
3.75e-53FFCP PHASE1:Hg19::chr15:74935416..74935419,-#_a97e795ac1e676e9299734df62a5908cp@chr15:74935416..74935419, -
3.75e-53FFCP PHASE2:Hg19::chr15:74935416..74935419,-#_a97e795ac1e676e9299734df62a5908cp@chr15:74935416..74935419, -
2.64e-50FFCP PHASE2:Hg19::chr12:4690021..4690046,+#_e799b3bd1f517b4d00a493b26cfeb6b5p@chr12:4690021..4690046, +
2.64e-50FFCP PHASE1:Hg19::chr12:4690021..4690046,+#_e799b3bd1f517b4d00a493b26cfeb6b5p@chr12:4690021..4690046, +
4.38e-50FFCP PHASE2:Hg19::chr17:28534912..28534942,-#_ddb1315469cada63ff6b336c40e9ee14p@chr17:28534912..28534942, -
4.38e-50FFCP PHASE1:Hg19::chr17:28534912..28534942,-#_ddb1315469cada63ff6b336c40e9ee14p@chr17:28534912..28534942, -
1.03e-46FFCP PHASE1:Hg19::chr4:189881560..189881604,-#_698bab7e38cadb8af123a113b824538ap@chr4:189881560..189881604, -
1.03e-46FFCP PHASE2:Hg19::chr4:189881560..189881604,-#_698bab7e38cadb8af123a113b824538ap@chr4:189881560..189881604, -
1.65e-46FFCP PHASE1:Hg19::chr22:19748407..19748412,+#_26649a2f82d9e5b064fbfcc37f181c61p5@TBX1
1.65e-46FFCP PHASE2:Hg19::chr22:19748407..19748412,+#_26649a2f82d9e5b064fbfcc37f181c61p5@TBX1
5.0e-45FFCP PHASE2:Hg19::chr6:168195978..168195989,+#_dd22280306d6fc1af3660edcbe10af35p3@LOC441179
5.0e-45FFCP PHASE1:Hg19::chr6:168195978..168195989,+#_dd22280306d6fc1af3660edcbe10af35p3@LOC441179
4.49e-44FFCP PHASE1:Hg19::chr15:65935213..65935234,+#_ba26ff75af693fb24cdce1dc063ef8eep8@SLC24A1
4.49e-44FFCP PHASE2:Hg19::chr15:65935213..65935234,+#_ba26ff75af693fb24cdce1dc063ef8eep8@SLC24A1
1.43e-43FFCP PHASE2:Hg19::chr5:141337703..141337712,-#_ea3bafb36bf3110f98a6396c661dee20p4@PCDH12
1.43e-43FFCP PHASE1:Hg19::chr5:141337703..141337712,-#_ea3bafb36bf3110f98a6396c661dee20p4@PCDH12
1.31e-40FFCP PHASE1:Hg19::chr22:19748074..19748094,-#_73e26f2dc0f056478c0bd6214a3ef4cbp@chr22:19748074..19748094, -
1.31e-40FFCP PHASE2:Hg19::chr22:19748074..19748094,-#_73e26f2dc0f056478c0bd6214a3ef4cbp@chr22:19748074..19748094, -
1.23e-38FFCP PHASE2:Hg19::chr2:33661536..33661549,+#_9c2f82c58942152cc54c65c3773f6fbep17@RASGRP3
1.23e-38FFCP PHASE1:Hg19::chr2:33661536..33661549,+#_9c2f82c58942152cc54c65c3773f6fbep17@RASGRP3
2.18e-38FFCP PHASE2:Hg19::chr6:49533964..49533975,+#_c01201ddba95d7485c20da6c34449574p@chr6:49533964..49533975, +
2.18e-38FFCP PHASE1:Hg19::chr6:49533964..49533975,+#_c01201ddba95d7485c20da6c34449574p@chr6:49533964..49533975, +
3.19e-38FFCP PHASE2:Hg19::chr6:46922535..46922542,-#_3e04330a56ab45fbcaacc6ca05733ceap9@GPR116
3.19e-38FFCP PHASE1:Hg19::chr6:46922535..46922542,-#_3e04330a56ab45fbcaacc6ca05733ceap9@GPR116
2.08e-36FFCP PHASE1:Hg19::chr6:84849274..84849294,+#_76cc9bd47950456a4f958f78c3521867p@chr6:84849274..84849294, +
2.08e-36FFCP PHASE2:Hg19::chr10:3477893..3477912,-#_76cc9bd47950456a4f958f78c3521867p@chr10:3477893..3477912, -
2.08e-36FFCP PHASE2:Hg19::chr6:84849274..84849294,+#_76cc9bd47950456a4f958f78c3521867p@chr6:84849274..84849294, +
2.08e-36FFCP PHASE1:Hg19::chr10:3477893..3477912,-#_76cc9bd47950456a4f958f78c3521867p@chr10:3477893..3477912, -
3.94e-34FFCP PHASE2:Hg19::chr3:30560368..30560379,+#_4ace0ce2143cf125ca7930fe4112084ep@chr3:30560368..30560379, +
3.94e-34FFCP PHASE1:Hg19::chr3:30560368..30560379,+#_4ace0ce2143cf125ca7930fe4112084ep@chr3:30560368..30560379, +
5.51e-34FFCP PHASE1:Hg19::chr4:144507245..144507268,-#_817975926f350b935f1d4053c71592ccp@chr4:144507245..144507268, -
5.51e-34FFCP PHASE2:Hg19::chr4:144507245..144507268,-#_817975926f350b935f1d4053c71592ccp@chr4:144507245..144507268, -
5.96e-34FFCP PHASE2:Hg19::chr15:65398647..65398656,-#_4be8eb0bb1649a5923a2df924868d532p3@UBAP1L
5.96e-34FFCP PHASE2:Hg19::chr10:4823046..4823055,-#_4be8eb0bb1649a5923a2df924868d532p@chr10:4823046..4823055, -
5.96e-34FFCP PHASE1:Hg19::chr10:4823046..4823055,-#_4be8eb0bb1649a5923a2df924868d532p@chr10:4823046..4823055, -
5.96e-34FFCP PHASE1:Hg19::chr15:65398647..65398656,-#_4be8eb0bb1649a5923a2df924868d532p3@UBAP1L
6.51e-34FFCP PHASE2:Hg19::chr1:47183850..47183861,-#_15c78b8155643c9da0b805b337917f00p12@KIAA0494
6.51e-34FFCP PHASE1:Hg19::chr1:47183850..47183861,-#_15c78b8155643c9da0b805b337917f00p12@KIAA0494
6.76e-34FFCP PHASE2:Hg19::chr1:228290095..228290116,-#_7dc909922dddf1cd281290229e459cc9p@chr1:228290095..228290116, -
6.76e-34FFCP PHASE1:Hg19::chr1:228290095..228290116,-#_7dc909922dddf1cd281290229e459cc9p@chr1:228290095..228290116, -
7.7e-34FFCP PHASE1:Hg19::chr22:19746577..19746611,+#_35db4a305fcde23a9c568d5c8b6255bdp@chr22:19746577..19746611, +
7.7e-34FFCP PHASE2:Hg19::chr19:47231566..47231577,-#_35db4a305fcde23a9c568d5c8b6255bdp@chr19:47231566..47231577, -
7.7e-34FFCP PHASE2:Hg19::chr22:19746577..19746611,+#_35db4a305fcde23a9c568d5c8b6255bdp@chr22:19746577..19746611, +
7.7e-34FFCP PHASE1:Hg19::chr19:47231566..47231577,-#_35db4a305fcde23a9c568d5c8b6255bdp@chr19:47231566..47231577, -
7.7e-34FFCP PHASE2:Hg19::chr17:65990349..65990362,-#_35db4a305fcde23a9c568d5c8b6255bdp@chr17:65990349..65990362, -
7.7e-34FFCP PHASE1:Hg19::chr17:65990349..65990362,-#_35db4a305fcde23a9c568d5c8b6255bdp@chr17:65990349..65990362, -
8.46e-34FFCP PHASE1:Hg19::chr4:183399811..183399829,+#_f2c64cb81c4245e4285d6cd339c861fep@chr4:183399811..183399829, +
8.46e-34FFCP PHASE2:Hg19::chr4:183399811..183399829,+#_f2c64cb81c4245e4285d6cd339c861fep@chr4:183399811..183399829, +
9.1e-34FFCP PHASE1:Hg19::chr7:107332367..107332379,+#_b7843ec3b412c3967273cf1ad0cb0e07p3@SLC26A4
9.1e-34FFCP PHASE2:Hg19::chr7:107332367..107332379,+#_b7843ec3b412c3967273cf1ad0cb0e07p3@SLC26A4
2.58e-33FFCP PHASE2:Hg19::chr2:71730376..71730412,+#_aba87bb645353aef3e8afb46e07b3708p@chr2:71730376..71730412, +
2.58e-33FFCP PHASE1:Hg19::chr2:71730376..71730412,+#_aba87bb645353aef3e8afb46e07b3708p@chr2:71730376..71730412, +
6.66e-33FFCP PHASE2:Hg19::chr9:139553916..139553927,+#_de4f49f324a9f45d10cc08fdee8f7d8dp@chr9:139553916..139553927, +
6.66e-33FFCP PHASE1:Hg19::chr9:139553916..139553927,+#_de4f49f324a9f45d10cc08fdee8f7d8dp@chr9:139553916..139553927, +
2.17e-32FFCP PHASE2:Hg19::chr10:3466752..3466759,-#_c3a474712db689b437b7709bb62db219p@chr10:3466752..3466759, -
2.17e-32FFCP PHASE1:Hg19::chr10:3466752..3466759,-#_c3a474712db689b437b7709bb62db219p@chr10:3466752..3466759, -
2.68e-32FFCP PHASE2:Hg19::chr12:96841308..96841312,+#_5b267874824712f14e29dfce0cf77528p@chr12:96841308..96841312, +
2.68e-32FFCP PHASE1:Hg19::chr12:96841308..96841312,+#_5b267874824712f14e29dfce0cf77528p@chr12:96841308..96841312, +
2.66e-31FFCP PHASE2:Hg19::chr12:120142354..120142372,-#_4cdc47d254e4616b4a41368d5006063fp@chr12:120142354..120142372, -
2.66e-31FFCP PHASE1:Hg19::chr12:120142354..120142372,-#_4cdc47d254e4616b4a41368d5006063fp@chr12:120142354..120142372, -
6.66e-31FFCP PHASE1:Hg19::chr1:61415107..61415136,-#_4160e93b0faf03e3049f051eaacf6925p@chr1:61415107..61415136, -
6.66e-31FFCP PHASE2:Hg19::chr1:61415107..61415136,-#_4160e93b0faf03e3049f051eaacf6925p@chr1:61415107..61415136, -
9.03e-31FFCP PHASE1:Hg19::chr15:89736241..89736275,+#_8586fb8b89ff12181e561cab4773636bp@chr15:89736241..89736275, +
9.03e-31FFCP PHASE2:Hg19::chr15:89736241..89736275,+#_8586fb8b89ff12181e561cab4773636bp@chr15:89736241..89736275, +
4.84e-30FFCP PHASE1:Hg19::chr10:4822908..4822927,-#_d6d11fb97ed03f66276111e3f63d8bdfp@chr10:4822908..4822927, -
4.84e-30FFCP PHASE2:Hg19::chr10:4822908..4822927,-#_d6d11fb97ed03f66276111e3f63d8bdfp@chr10:4822908..4822927, -

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