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{{UBERON
{{UBERON
|id=UBERON:0005965
|alt_id=
|name=outflow part of right atrium
|namespace=
|def="Outflow part of atrium which consists of wall and cavity of the outflow part of right atrium and the tricuspid valve.[FMA]" [FMA:9550, FMA:FMA]
|xref=FMA:9550
|is_a=UBERON:0005946
|synonym="main part of right atrium" EXACT [FMA:9550];;"outflow tract of right atrium" EXACT [FMA:9550]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Outflow part of atrium which consists of wall and cavity of the outflow part of right atrium and the tricuspid valve.[FMA]" [FMA:9550, FMA:FMA]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005965
|is_a=UBERON:0005946
|is_obsolete=
|located_in=
|located_in=
|name=outflow part of right atrium
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002078
|part_of=UBERON:0002078
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym="main part of right atrium" EXACT [FMA:9550];;"outflow tract of right atrium" EXACT [FMA:9550]
|union_of=
|xref=FMA:9550
}}
}}

Latest revision as of 17:55, 12 September 2014

Name:outflow part of right atrium
Namespace:FANTOM
Definition:"Outflow part of atrium which consists of wall and cavity of the outflow part of right atrium and the tricuspid valve.[FMA]" [FMA:9550, FMA:FMA]
Xrefs:
links:
FMA:9550
Synonyms: "main part of right atrium" EXACT [FMA:9550]
"outflow tract of right atrium" EXACT [FMA:9550]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005946(outflow tract of atrium)
part_of:UBERON:0002078(right cardiac atrium)



Children

part of:UBERON:0002134 (tricuspid valve)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005965 (outflow part of right atrium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_f3d0ee6d927607664b3e407fa47389e4p@chr5:99390735..99390743, -
5.42e-195FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_f3d0ee6d927607664b3e407fa47389e4p@chr15:86272097..86272099, +
5.42e-195FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_f3d0ee6d927607664b3e407fa47389e4p@chr10:92678409..92678410, -
5.42e-195FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_f3d0ee6d927607664b3e407fa47389e4p@chr10:92678409..92678410, -
5.42e-195FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_f3d0ee6d927607664b3e407fa47389e4p@chr15:86272097..86272099, +
5.42e-195FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_f3d0ee6d927607664b3e407fa47389e4p@chr5:99390735..99390743, -
9.37e-99FFCP PHASE2:Hg19::chr7:97501400..97501407,-#_82ca7315f20579c577b345686fa34416p16@ASNS
9.37e-99FFCP PHASE1:Hg19::chr7:97501400..97501407,-#_82ca7315f20579c577b345686fa34416p16@ASNS
9.37e-99FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_82ca7315f20579c577b345686fa34416p@chr2:179656442..179656451, -
9.37e-99FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_82ca7315f20579c577b345686fa34416p@chr2:179656442..179656451, -
2.55e-98FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr22:36000901..36000903, -
2.55e-98FFCP PHASE1:Hg19::chr14:68375236..68375240,+#_6fbdaad8df0179f0e4a04d7beff8b8ebp9@RAD51B
2.55e-98FFCP PHASE2:Hg19::chr6:70647888..70647891,+#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr6:70647888..70647891, +
2.55e-98FFCP PHASE2:Hg19::chr18:4003453..4003457,+#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr18:4003453..4003457, +
2.55e-98FFCP PHASE2:Hg19::chr2:103287330..103287331,+#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr2:103287330..103287331, +
2.55e-98FFCP PHASE2:Hg19::chr6:104898467..104898469,-#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr6:104898467..104898469, -
2.55e-98FFCP PHASE1:Hg19::chr6:70647888..70647891,+#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr6:70647888..70647891, +
2.55e-98FFCP PHASE1:Hg19::chr18:4003453..4003457,+#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr18:4003453..4003457, +
2.55e-98FFCP PHASE2:Hg19::chr8:24530708..24530710,+#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr8:24530708..24530710, +
2.55e-98FFCP PHASE1:Hg19::chr2:103287330..103287331,+#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr2:103287330..103287331, +
2.55e-98FFCP PHASE1:Hg19::chr6:104898467..104898469,-#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr6:104898467..104898469, -
2.55e-98FFCP PHASE1:Hg19::chr8:24530708..24530710,+#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr8:24530708..24530710, +
2.55e-98FFCP PHASE2:Hg19::chr5:157747715..157747717,+#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr5:157747715..157747717, +
2.55e-98FFCP PHASE2:Hg19::chr18:39821929..39821932,+#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr18:39821929..39821932, +
2.55e-98FFCP PHASE2:Hg19::chr14:68375236..68375240,+#_6fbdaad8df0179f0e4a04d7beff8b8ebp9@RAD51B
2.55e-98FFCP PHASE1:Hg19::chr5:157747715..157747717,+#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr5:157747715..157747717, +
2.55e-98FFCP PHASE1:Hg19::chr18:39821929..39821932,+#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr18:39821929..39821932, +
2.55e-98FFCP PHASE1:Hg19::chrX:136514398..136514433,-#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chrX:136514398..136514433, -
2.55e-98FFCP PHASE2:Hg19::chrX:136514398..136514433,-#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chrX:136514398..136514433, -
2.55e-98FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_6fbdaad8df0179f0e4a04d7beff8b8ebp@chr22:36000901..36000903, -
1.23e-66FFCP PHASE1:Hg19::chr17:77026478..77026512,+#_244780f16b741fea1515548cdffa06f7p@chr17:77026478..77026512, +
1.23e-66FFCP PHASE1:Hg19::chr2:123518588..123518591,+#_244780f16b741fea1515548cdffa06f7p@chr2:123518588..123518591, +
1.23e-66FFCP PHASE2:Hg19::chr16:10783399..10783401,+#_244780f16b741fea1515548cdffa06f7p@chr16:10783399..10783401, +
1.23e-66FFCP PHASE2:Hg19::chr2:26508626..26508627,+#_244780f16b741fea1515548cdffa06f7p@chr2:26508626..26508627, +
1.23e-66FFCP PHASE1:Hg19::chr2:26508626..26508627,+#_244780f16b741fea1515548cdffa06f7p@chr2:26508626..26508627, +
1.23e-66FFCP PHASE2:Hg19::chr5:99385820..99385831,-#_244780f16b741fea1515548cdffa06f7p@chr5:99385820..99385831, -
1.23e-66FFCP PHASE1:Hg19::chr14:30786806..30786810,-#_244780f16b741fea1515548cdffa06f7p@chr14:30786806..30786810, -
1.23e-66FFCP PHASE1:Hg19::chr5:99385820..99385831,-#_244780f16b741fea1515548cdffa06f7p@chr5:99385820..99385831, -
1.23e-66FFCP PHASE2:Hg19::chr19:35531882..35531893,-#_244780f16b741fea1515548cdffa06f7p@chr19:35531882..35531893, -
1.23e-66FFCP PHASE1:Hg19::chr2:218844837..218844842,-#_244780f16b741fea1515548cdffa06f7p@chr2:218844837..218844842, -
1.23e-66FFCP PHASE2:Hg19::chr2:218844837..218844842,-#_244780f16b741fea1515548cdffa06f7p@chr2:218844837..218844842, -
1.23e-66FFCP PHASE1:Hg19::chr19:35531882..35531893,-#_244780f16b741fea1515548cdffa06f7p@chr19:35531882..35531893, -
1.23e-66FFCP PHASE1:Hg19::chr16:10783399..10783401,+#_244780f16b741fea1515548cdffa06f7p@chr16:10783399..10783401, +
1.23e-66FFCP PHASE2:Hg19::chr17:77026478..77026512,+#_244780f16b741fea1515548cdffa06f7p@chr17:77026478..77026512, +
1.23e-66FFCP PHASE2:Hg19::chr14:30786806..30786810,-#_244780f16b741fea1515548cdffa06f7p@chr14:30786806..30786810, -
1.23e-66FFCP PHASE2:Hg19::chr2:123518588..123518591,+#_244780f16b741fea1515548cdffa06f7p@chr2:123518588..123518591, +
2.39e-66FFCP PHASE2:Hg19::chr19:7795730..7795740,-#_428123a277504716f30ee79fb7ff84c9p5@CLEC4G
2.39e-66FFCP PHASE1:Hg19::chr8:127508635..127508640,+#_428123a277504716f30ee79fb7ff84c9p@chr8:127508635..127508640, +
2.39e-66FFCP PHASE1:Hg19::chr3:135043585..135043591,-#_428123a277504716f30ee79fb7ff84c9p@chr3:135043585..135043591, -
2.39e-66FFCP PHASE2:Hg19::chr10:54464025..54464030,+#_428123a277504716f30ee79fb7ff84c9p@chr10:54464025..54464030, +
2.39e-66FFCP PHASE1:Hg19::chr19:44414731..44414733,+#_428123a277504716f30ee79fb7ff84c9p@chr19:44414731..44414733, +
2.39e-66FFCP PHASE2:Hg19::chr8:127508635..127508640,+#_428123a277504716f30ee79fb7ff84c9p@chr8:127508635..127508640, +
2.39e-66FFCP PHASE2:Hg19::chr6:104465140..104465144,-#_428123a277504716f30ee79fb7ff84c9p@chr6:104465140..104465144, -
2.39e-66FFCP PHASE1:Hg19::chr19:7795730..7795740,-#_428123a277504716f30ee79fb7ff84c9p5@CLEC4G
2.39e-66FFCP PHASE2:Hg19::chr10:63204408..63204412,-#_428123a277504716f30ee79fb7ff84c9p@chr10:63204408..63204412, -
2.39e-66FFCP PHASE1:Hg19::chr13:56591781..56591785,-#_428123a277504716f30ee79fb7ff84c9p@chr13:56591781..56591785, -
2.39e-66FFCP PHASE2:Hg19::chr5:175084679..175084689,+#_428123a277504716f30ee79fb7ff84c9p4@HRH2
2.39e-66FFCP PHASE1:Hg19::chr6:104465140..104465144,-#_428123a277504716f30ee79fb7ff84c9p@chr6:104465140..104465144, -
2.39e-66FFCP PHASE2:Hg19::chr2:42043637..42043640,-#_428123a277504716f30ee79fb7ff84c9p@chr2:42043637..42043640, -
2.39e-66FFCP PHASE1:Hg19::chr5:175084679..175084689,+#_428123a277504716f30ee79fb7ff84c9p4@HRH2
2.39e-66FFCP PHASE2:Hg19::chr7:54897467..54897468,-#_428123a277504716f30ee79fb7ff84c9p@chr7:54897467..54897468, -
2.39e-66FFCP PHASE2:Hg19::chr1:203150041..203150049,-#_428123a277504716f30ee79fb7ff84c9p@chr1:203150041..203150049, -
2.39e-66FFCP PHASE1:Hg19::chr2:42043637..42043640,-#_428123a277504716f30ee79fb7ff84c9p@chr2:42043637..42043640, -
2.39e-66FFCP PHASE1:Hg19::chr10:54464025..54464030,+#_428123a277504716f30ee79fb7ff84c9p@chr10:54464025..54464030, +
2.39e-66FFCP PHASE2:Hg19::chr18:40200823..40200829,+#_428123a277504716f30ee79fb7ff84c9p@chr18:40200823..40200829, +
2.39e-66FFCP PHASE2:Hg19::chr13:56591781..56591785,-#_428123a277504716f30ee79fb7ff84c9p@chr13:56591781..56591785, -
2.39e-66FFCP PHASE2:Hg19::chr2:238859791..238859796,-#_428123a277504716f30ee79fb7ff84c9p@chr2:238859791..238859796, -
2.39e-66FFCP PHASE2:Hg19::chr1:1154360..1154365,-#_428123a277504716f30ee79fb7ff84c9p@chr1:1154360..1154365, -
2.39e-66FFCP PHASE1:Hg19::chr10:63204408..63204412,-#_428123a277504716f30ee79fb7ff84c9p@chr10:63204408..63204412, -
2.39e-66FFCP PHASE1:Hg19::chr7:54897467..54897468,-#_428123a277504716f30ee79fb7ff84c9p@chr7:54897467..54897468, -
2.39e-66FFCP PHASE1:Hg19::chr1:203150041..203150049,-#_428123a277504716f30ee79fb7ff84c9p@chr1:203150041..203150049, -
2.39e-66FFCP PHASE1:Hg19::chr18:40200823..40200829,+#_428123a277504716f30ee79fb7ff84c9p@chr18:40200823..40200829, +
2.39e-66FFCP PHASE2:Hg19::chr5:150006500..150006508,-#_428123a277504716f30ee79fb7ff84c9p@chr5:150006500..150006508, -
2.39e-66FFCP PHASE1:Hg19::chr2:238859791..238859796,-#_428123a277504716f30ee79fb7ff84c9p@chr2:238859791..238859796, -
2.39e-66FFCP PHASE1:Hg19::chr1:1154360..1154365,-#_428123a277504716f30ee79fb7ff84c9p@chr1:1154360..1154365, -
2.39e-66FFCP PHASE2:Hg19::chr1:189481131..189481134,-#_428123a277504716f30ee79fb7ff84c9p@chr1:189481131..189481134, -
2.39e-66FFCP PHASE1:Hg19::chr5:150006500..150006508,-#_428123a277504716f30ee79fb7ff84c9p@chr5:150006500..150006508, -
2.39e-66FFCP PHASE2:Hg19::chr1:1154830..1154841,-#_428123a277504716f30ee79fb7ff84c9p@chr1:1154830..1154841, -
2.39e-66FFCP PHASE1:Hg19::chr1:189481131..189481134,-#_428123a277504716f30ee79fb7ff84c9p@chr1:189481131..189481134, -
2.39e-66FFCP PHASE1:Hg19::chr1:1154830..1154841,-#_428123a277504716f30ee79fb7ff84c9p@chr1:1154830..1154841, -
2.39e-66FFCP PHASE2:Hg19::chr3:135043585..135043591,-#_428123a277504716f30ee79fb7ff84c9p@chr3:135043585..135043591, -
2.39e-66FFCP PHASE2:Hg19::chr19:44414731..44414733,+#_428123a277504716f30ee79fb7ff84c9p@chr19:44414731..44414733, +
4.66e-66FFCP PHASE2:Hg19::chr13:25345488..25345491,+#_2d5f0e93669c3a17fc9c33aa178f2044p@chr13:25345488..25345491, +
4.66e-66FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_2d5f0e93669c3a17fc9c33aa178f2044p9@NPPA
4.66e-66FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_2d5f0e93669c3a17fc9c33aa178f2044p9@NPPA
4.66e-66FFCP PHASE2:Hg19::chr10:37485037..37485044,+#_2d5f0e93669c3a17fc9c33aa178f2044p@chr10:37485037..37485044, +
4.66e-66FFCP PHASE2:Hg19::chr9:86211495..86211499,-#_2d5f0e93669c3a17fc9c33aa178f2044p1@ENST00000362613
4.66e-66FFCP PHASE2:Hg19::chr2:16526810..16526812,-#_2d5f0e93669c3a17fc9c33aa178f2044p@chr2:16526810..16526812, -
4.66e-66FFCP PHASE2:Hg19::chr3:39233987..39233993,-#_2d5f0e93669c3a17fc9c33aa178f2044p14@XIRP1
4.66e-66FFCP PHASE1:Hg19::chr9:86211495..86211499,-#_2d5f0e93669c3a17fc9c33aa178f2044p1@ENST00000362613
4.66e-66FFCP PHASE2:Hg19::chr1:11905799..11905806,-#_2d5f0e93669c3a17fc9c33aa178f2044p@chr1:11905799..11905806, -
4.66e-66FFCP PHASE1:Hg19::chr2:16526810..16526812,-#_2d5f0e93669c3a17fc9c33aa178f2044p@chr2:16526810..16526812, -
4.66e-66FFCP PHASE2:Hg19::chr4:88042092..88042099,-#_2d5f0e93669c3a17fc9c33aa178f2044p@chr4:88042092..88042099, -
4.66e-66FFCP PHASE1:Hg19::chr13:25345488..25345491,+#_2d5f0e93669c3a17fc9c33aa178f2044p@chr13:25345488..25345491, +
4.66e-66FFCP PHASE1:Hg19::chr3:39233987..39233993,-#_2d5f0e93669c3a17fc9c33aa178f2044p14@XIRP1
4.66e-66FFCP PHASE1:Hg19::chr1:11905799..11905806,-#_2d5f0e93669c3a17fc9c33aa178f2044p@chr1:11905799..11905806, -
4.66e-66FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_2d5f0e93669c3a17fc9c33aa178f2044p@chr21:40459334..40459341, +
4.66e-66FFCP PHASE1:Hg19::chr10:37485037..37485044,+#_2d5f0e93669c3a17fc9c33aa178f2044p@chr10:37485037..37485044, +
4.66e-66FFCP PHASE1:Hg19::chr4:88042092..88042099,-#_2d5f0e93669c3a17fc9c33aa178f2044p@chr4:88042092..88042099, -
4.66e-66FFCP PHASE1:Hg19::chr8:135501299..135501346,-#_2d5f0e93669c3a17fc9c33aa178f2044p@chr8:135501299..135501346, -

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