FFCP PHASE1:Hg19::chr11:17166438..17166442,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:17166438..17166442,- to FFCP PHASE1:Hg19::chr11:17166438..17166442,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:17166438..17166442,- | |||
|description=CAGE_peak_at_chr11:17166438..17166442,- | |||
|id=chr11:17166438..17166442,- | |||
|ontology_enrichment_celltype=CL:0000542!6.78e-07!53;CL:0000051!6.78e-07!53;CL:0000838!7.17e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.88e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.80e-21!115;UBERON:0001049!1.90e-12!57;UBERON:0005068!1.90e-12!57;UBERON:0006241!1.90e-12!57;UBERON:0007135!1.90e-12!57;UBERON:0002616!3.98e-10!59;UBERON:0000955!1.24e-09!69;UBERON:0006238!1.24e-09!69;UBERON:0003080!3.10e-09!42;UBERON:0001017!6.91e-09!82;UBERON:0002780!7.69e-09!41;UBERON:0001890!7.69e-09!41;UBERON:0006240!7.69e-09!41;UBERON:0000073!8.80e-09!94;UBERON:0001016!8.80e-09!94;UBERON:0005743!2.64e-08!86;UBERON:0002346!3.21e-08!90;UBERON:0002020!1.46e-07!34;UBERON:0003528!1.46e-07!34;UBERON:0001893!2.61e-07!34;UBERON:0003075!2.77e-07!86;UBERON:0007284!2.77e-07!86;UBERON:0002791!4.11e-07!33;UBERON:0001869!9.48e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;1.96e-13;4!UBERON:0006947;7.79e-11;3!UBERON:0004054;7.79e-11;3!UBERON:0001894;9.48e-11;7!UBERON:0003135;7.93e-10;11!UBERON:0000073;2.38e-08;53!UBERON:0002616;2.38e-08;53!UBERON:0004732;7.75e-08;13!UBERON:0002133;8.88e-08;2!UBERON:0003296;1.45e-07;4!UBERON:0010133;1.45e-07;4!UBERON:0000007;2.47e-07;2!UBERON:0002780;5.82e-07;41!UBERON:0001890;5.82e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.02e-19,114;UBERON:0005904,1.10e-13,4;UBERON:0001049,6.26e-13,56;UBERON:0005068,6.26e-13,56;UBERON:0006241,6.26e-13,56;UBERON:0007135,6.26e-13,56;UBERON:0002346,9.12e-13,86;UBERON:0003075,2.72e-12,82;UBERON:0007284,2.72e-12,82;UBERON:0000073,3.99e-12,53;UBERON:0002616,3.99e-12,53;UBERON:0006947,7.54e-11,3;UBERON:0004054,7.54e-11,3;UBERON:0001894,1.25e-10,7;UBERON:0006222,1.25e-10,7;UBERON:0003135,6.75e-10,11;UBERON:0001017,1.14e-08,81;UBERON:0010371,1.33e-08,104;UBERON:0000955,1.93e-08,68;UBERON:0006238,1.93e-08,68;UBERON:0001016,2.19e-08,89;UBERON:0004732,5.45e-08,13;UBERON:0002780,7.64e-08,41;UBERON:0001890,7.64e-08,41;UBERON:0003080,7.64e-08,41;UBERON:0006240,7.64e-08,41;UBERON:0002133,1.09e-07,2;UBERON:0003296,1.21e-07,4;UBERON:0010133,1.21e-07,4;UBERON:0000007,2.42e-07,2;UBERON:0003076,6.03e-07,15;UBERON:0003057,6.03e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.305653622991805,0.246301768349837,0.157421562627358,0,0.383829398097213,0,0,0,0,0.154934401160603,0.284338464974843,0.293600439334847,1.10799081706375,0,0.651032612147555,0,0,0.257575567634187,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0,0.598390972864896,0.426224750532694,0,0,0,0,1.0429658368404,0.217188844705117,0,0,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0.285012743741249,0.39783335439818,0,0,0,0.889509253863555,0,0,0.574752439954483,0.661044872784862,0.954053754535364,1.70763890732835,1.17447437874188,1.52909291250092,0,0,0,0.196709770113833,0.393010762749165,1.02800749499755,0,0.977766799900771,0,0,0.222820913770347,0.589211814949674,0.443067789167242,0,0.128091319725675,0,0,0.276350017785848,0,0.14828656316206,0,0,0.339928028092699,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0,1.24930726552346,0.710331756132051,0.821127996921047,0.604820229674197,1.87208137048455,1.73789284659359,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.351339142772504,0.654895377488563,0.364295288292542,0,0,0,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0,0,0,0.357198913136319,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,1.19168262731897,0.860509862246441,0,0,0,0,0,0.134710672069688,0.490385709340376,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0.280901613404497,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0.336672227908132,0.375355559615893,0,0,0.30648779579902,0.150238058906597,0,1.07633781413317,0,0,0.300091096084402,0.206105058476878,0.515281080091258,0.18611685633159,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0.545492241181669,0,0,0,0.116193942869518,0.10366105501537,0,1.09493207722749,0,0,0,0.464367928031979,0,0,0,0,0,0.217879444092406,0,0,0,0.38474715694639,0.738155454624648,0,0,0,0,1.96565443335525,0,0.441463099414651,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0.925971025153221,0.190254152234598,0,0,0.984868024349589,0,0.297262324577456,0,0,0,0.179117045405697,0,0,0,0.088048434013226,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0.537182889719687,0.336255431980582,0.394061520403854,1.2937654491571,1.41177339907723,0,3.90419561572865,0,0,0,2.24702107184155,5.9832291840805,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0.862856803274467,0.640365346820666,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.483437798366489,0,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.9273691048295,0.27470839445503,0.330037999682352,0,0,1.6068392984416,0,0,0.15350367472613,0.275673144969061,0.644521469209642,0,0,0.178064071293475,0,0.192190067365106,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0.632758849437452,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.753150406214233,0,0,0.443430153536676,0,0.507447609232169,1.52927441428475,1.13929437434833,0.238231775457789,0.411362273086194,0,1.08006287447623,0,0.534120355637366,0,0.490080431962063,0.185803175125719,0,0.284567373393656,0.159426272728822,0,0,0.423347165447766,0,0.561594356226918,0,0.156679895773023,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0.33307196799782,0,0,0.586032717087576,0,0.222886768554957,0.284136146806413,0.47748896947538,0.296964680832639,0.614321404198464,0,0.844016498463076,0.445234820091624,0.329607748453519,1.26675244876796,2.19172787076177,1.10513566212459,0,0.818149460017238,0.984678443688556,0.311039587661807,0,0.179021174675609,0,0.0986434056369336,2.3948309234694,0,0.969332746095218,0.371072392647405,0,0.520855522170466,0.174919999992391,0.724999575434793,0,0,0,0,0,0.347249989866585,0,1.32656082487949,0,2.76448149828062,1.47773809476774,0,0,0,0.384751292518985,0.113942055847001,0,0.628303510868405,0.434589487688032,0,0,0.533034776018635,0,0.156980256395025,0,0,0.784250137270958,0,0,0,0.210998064528027,0,0.565412285735763,0.216388639742091,0,0.973033209536731,0,0,0.123563938946503,0,0.471807930864739,0.802577647298789,1.1713222286267,0,0.391329237864179,0.485560759068186,2.36750641709634,4.83962864194656,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,2.62090002363045,0.343972064943233,0.290268993867255,0.146178634172371,0.739039113478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| ||
|short_description=p@chr11:17166438..17166442,- | |||
}} | }} |
Latest revision as of 20:26, 23 July 2015
Short description: | p@chr11:17166438..17166442, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:17166438..17166442, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.02e-19 | 114 |
duct of male reproductive system | 1.10e-13 | 4 |
neural tube | 6.26e-13 | 56 |
neural rod | 6.26e-13 | 56 |
future spinal cord | 6.26e-13 | 56 |
neural keel | 6.26e-13 | 56 |
neurectoderm | 9.12e-13 | 86 |
neural plate | 2.72e-12 | 82 |
presumptive neural plate | 2.72e-12 | 82 |
regional part of nervous system | 3.99e-12 | 53 |
regional part of brain | 3.99e-12 | 53 |
male genital duct | 7.54e-11 | 3 |
internal male genitalia | 7.54e-11 | 3 |
diencephalon | 1.25e-10 | 7 |
future diencephalon | 1.25e-10 | 7 |
male reproductive organ | 6.75e-10 | 11 |
central nervous system | 1.14e-08 | 81 |
ecto-epithelium | 1.33e-08 | 104 |
brain | 1.93e-08 | 68 |
future brain | 1.93e-08 | 68 |
nervous system | 2.19e-08 | 89 |
segmental subdivision of nervous system | 5.45e-08 | 13 |
regional part of forebrain | 7.64e-08 | 41 |
forebrain | 7.64e-08 | 41 |
anterior neural tube | 7.64e-08 | 41 |
future forebrain | 7.64e-08 | 41 |
atrioventricular valve | 1.09e-07 | 2 |
gland of diencephalon | 1.21e-07 | 4 |
neuroendocrine gland | 1.21e-07 | 4 |
pituitary gland | 2.42e-07 | 2 |
posterior neural tube | 6.03e-07 | 15 |
chordal neural plate | 6.03e-07 | 15 |