FFCP PHASE1:Hg19::chr11:2018746..2018865,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2018746..2018865,+ to FFCP PHASE1:Hg19::chr11:2018746..2018865,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHT2 | |UniProt=Q9UHT2 | ||
|association_with_transcript=261bp_to_AF118081_5end | |||
|cluster_id=chr11:2018746..2018865,+ | |||
|coexpression_cluster_id=C2119 | |||
|description=CAGE_peak_1_at_AF118081_5end | |||
|id=chr11:2018746..2018865,+ | |||
|ontology_enrichment_celltype=CL:0000188!3.30e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.22e-14;19!CL:0000188;1.73e-11;9!CL:0000680;5.54e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.65e-14,19;CL:0000188,1.59e-11,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001557!1.78e-12!19;UBERON:0003104!6.53e-11!238;UBERON:0009142!6.53e-11!238;UBERON:0001737!1.71e-10!9;UBERON:0005631!1.84e-10!14;UBERON:0000158!1.84e-10!14;UBERON:0000481!5.57e-10!347;UBERON:0000478!1.12e-09!24;UBERON:0004921!1.97e-09!129;UBERON:0004185!1.97e-09!129;UBERON:0004119!3.82e-09!169;UBERON:0000925!3.82e-09!169;UBERON:0006595!3.82e-09!169;UBERON:0000077!1.81e-08!130;UBERON:0003124!4.26e-08!7;UBERON:0003103!4.69e-08!69;UBERON:0001007!5.33e-08!155;UBERON:0001555!5.33e-08!155;UBERON:0007026!5.33e-08!155;UBERON:0001041!8.57e-08!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.83e-20;16!UBERON:0002036;1.83e-20;16!UBERON:0001737;6.05e-15;9!UBERON:0001557;6.05e-15;9!UBERON:0000478;7.69e-14;24!UBERON:0005631;8.45e-10;10!UBERON:0000158;8.45e-10;10!UBERON:0002385;1.97e-09;31!UBERON:0001015;1.97e-09;31!UBERON:0000383;1.97e-09;31!UBERON:0001987;1.74e-07;4!UBERON:0011135;7.81e-07;5!UBERON:0002216;7.81e-07;5!UBERON:0011134;7.81e-07;5!UBERON:0002209;7.81e-07;5!UBERON:0002213;7.81e-07;5!UBERON:0007844;7.81e-07;5!UBERON:0011138;7.81e-07;5!UBERON:0001130;7.81e-07;5!UBERON:0001066;7.81e-07;5!UBERON:0001468;7.81e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.74e-15,14;UBERON:0000158,1.74e-15,14;UBERON:0001737,6.04e-15,9;UBERON:0000478,5.92e-14,24;UBERON:0001557,2.51e-12,19;UBERON:0003124,2.32e-11,7;UBERON:0003104,1.10e-10,160;UBERON:0009142,1.10e-10,160;UBERON:0005256,2.10e-09,122;UBERON:0007503,8.86e-08,78;UBERON:0002385,9.39e-08,64;UBERON:0001015,9.39e-08,64;UBERON:0000383,9.39e-08,64;UBERON:0001987,1.70e-07,4;UBERON:0004340,1.70e-07,4;UBERON:0001134,1.94e-07,62;UBERON:0002036,1.94e-07,62;UBERON:0003082,1.94e-07,62;UBERON:0001041,2.38e-07,87;UBERON:0004921,5.93e-07,118;UBERON:0011135,7.57e-07,5;UBERON:0002216,7.57e-07,5;UBERON:0011134,7.57e-07,5;UBERON:0002209,7.57e-07,5;UBERON:0002213,7.57e-07,5;UBERON:0005856,7.57e-07,5;UBERON:0005866,7.57e-07,5;UBERON:0005863,7.57e-07,5;UBERON:0007844,7.57e-07,5;UBERON:0011138,7.57e-07,5;UBERON:0001130,7.57e-07,5;UBERON:0001066,7.57e-07,5;UBERON:0001468,7.57e-07,5 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,2.23480547213644,22.6808016266096,0,0,0.261185628199839,0.245733936501509,2.79120467188971,21.8441372130172,68.5794143393979,1.60896258848061,7.62213964174206,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.2786256184353,0,0,0.144846518960824,0,2.91980922181582,0.189069634328136,0,0.087834785693126,0.392937226493138,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.97084160227691,0,0.24666754841716,0.311211035399766,0.269421344139376,1.14423332179421,1.05950199351452,36.2990832422399,0.937285727335186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,6.9716365721711,2.07322110030741,2.52320850875628,0,0,0,0,0,0,47.6776404160571,50.5754070234305,53.9864706939,46.9852323839998,49.0228749207914,49.8268300133303,55.4156676538276,49.8402521418379,76.9494313892781,2.95262181849859,4.20725321410337,4.115740113314,20.5812195939759,1.26755034821831,0,5.90789906681404,0,0,0,0,0,0.100528972411631,11.018024973865,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71573592389777,66.1998358577561,1.64648067356154,0,1.06617584622764,3.16780749173372,0,0,0,0,0,0,0,0,1.42636905040718,6.37037749337349,11.3011977402711,4.1184021545176,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,0.167516265334349,2.55175500661265,0,0,0,4.04881922673162,5.00170521059677,3.25518028439683,0,0,0,0.117141414992713,1.20378439891088,0,6.2083842775503,0,0.737476674166813,0,19.5801157462741,89.2172901908225,0,0,0,43.3472427168151,58.252403828674,95.555332692179,0.744323423456331,0,4.2099014164961,0.640695746278505,0,1.44768529029247,19.2943486378488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,1.02056223165909,0.863663664408557,13.880452742126,0.270946437543853,3.01013864312912,0,0,0,0,0,0,0.328014645699706,0,3.19427136107939,0.0915694648183434,0,0,0,0,5.31688950606671,4.46740989632469,9.3637241582939,8.1323577765873,1.39646318328756,6.0907011443976,4.34655799822115,22.0799448403909,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,1.86079184679834,0.949138274156178,1.33441135746677,0,16.6896205333229,0,0,0.179872457583315,0,0.235624804691373,0,0,0,1.46290121726877,0,0,0,0,1.13008116620243,0,0,0,0,7.87073702455959,0,0,0,0.286822704408103,5.01070109166918,0,0,0.211107635297664,0.987884678879706,0.75894634753143,8.74836800612457,0,0,0,1.7887322147588,0,0,0.886860307073351,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,52.0462976728164,24.0541391474437,126.857369966983,0,0,0,0,0.844501632511974,0.398495976502139,0.552567831062295,4.53478946137697,0,0,0,0,0,0,1.38100767891707,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.910347586283997,0.508507300585533,5.2005289988946,1.03423011972439,0,0,0,0,0,0,0,0,0,0,1.53900517007594,0,0,4.39812457607883,16.6230479040672,46.5741693208602,1.74035427463538,103.408746547615,0,0,0,0.451191321234361,0.588187602953219,0.503464760927528,0,0,0,0,0,0,0,0.176915129006678,18.9419344929424,0.296521128680622,0,0,0,107.545404738038,0,0,0,0,0.789168805698781,26.6179575307061,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,3.14508002835654,0,0,0,0,0.484945082442097,0,10.621094816685,0,0,0,0.391102765469606,0,0,67.3358384291779,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,1.59743200399193,2.57535628881943,1.33902874465124,3.42635709682304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,2.57027481861491,0,0,0,5.71756261098694,4.63464379255802,0.5085370753095,0,0,0,0,0,0,0.113312091520126,1.31897010310274,193.460057811843,0,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0.468334905806882,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.400721881242,0,0.673498977531838,0,0,0,1.30497145982606,0,0,0,0,0,0,0,0,0,0,1.72715170865599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09734283307391,0,3.71312769852847,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0.589848616738702,0.917142992608395,40.2029318203177,0,0,0,0.676892955143315,0,1.56302802246618,74.6434079272054,0,0.591424344868181,0,0,0,0,0,0.548257766857182,7.93937885422871,0,1.02209942111676,0,0,0,0,19.6032238059432,0,0.171488009437418,0,0,0,0,0.313972371402056,0,8.40816489941367,62.0947929946457,0,0,0.0714765441766563,0,0,0,0,0,0.3414369541879,0,0,0,0,1.27016115057279,4.582137370881,0,0,0,0,0,5.82685953469105,8.62367577592475,200.647896621508,9.22850886812365,0,0.397901550322736,0.118920090777569,0,0,0,0.0771741581079447,13.1135736302374,0,2.69663153929296,0.707029641304878,0,0,7.1851473689178,0,0,3.22289439867886,0,0.892769693028288,0,0,13.1460549884373,0,0,0.315543124386369,0,0.436350690340377,10.580536810308,1.11598505450025,0.462175628631418,31.1491124729128,0,1.09265571963696,0.760191006068622,0,0,0,0,0.757786982182394,1.07185652062471,0,0,4.05144565611864,30.4722472273588,0.0645889098360061,0.434523000071005,0,0.12729431655633,16.1693751166575,13.9338718654055,184.463749284966,0.942928742204225,0.860666464712116,43.2458463509817,0.0814032686109745,0,0,0,68.0458732970017,0.977931553462932,16.2758471326295,0.665756774185513,1.61019034872821,0 | |phase1_expression=0.363356758541113,0.428201047781966,0,0,2.23480547213644,22.6808016266096,0,0,0.261185628199839,0.245733936501509,2.79120467188971,21.8441372130172,68.5794143393979,1.60896258848061,7.62213964174206,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.2786256184353,0,0,0.144846518960824,0,2.91980922181582,0.189069634328136,0,0.087834785693126,0.392937226493138,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.97084160227691,0,0.24666754841716,0.311211035399766,0.269421344139376,1.14423332179421,1.05950199351452,36.2990832422399,0.937285727335186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,6.9716365721711,2.07322110030741,2.52320850875628,0,0,0,0,0,0,47.6776404160571,50.5754070234305,53.9864706939,46.9852323839998,49.0228749207914,49.8268300133303,55.4156676538276,49.8402521418379,76.9494313892781,2.95262181849859,4.20725321410337,4.115740113314,20.5812195939759,1.26755034821831,0,5.90789906681404,0,0,0,0,0,0.100528972411631,11.018024973865,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71573592389777,66.1998358577561,1.64648067356154,0,1.06617584622764,3.16780749173372,0,0,0,0,0,0,0,0,1.42636905040718,6.37037749337349,11.3011977402711,4.1184021545176,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,0.167516265334349,2.55175500661265,0,0,0,4.04881922673162,5.00170521059677,3.25518028439683,0,0,0,0.117141414992713,1.20378439891088,0,6.2083842775503,0,0.737476674166813,0,19.5801157462741,89.2172901908225,0,0,0,43.3472427168151,58.252403828674,95.555332692179,0.744323423456331,0,4.2099014164961,0.640695746278505,0,1.44768529029247,19.2943486378488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,1.02056223165909,0.863663664408557,13.880452742126,0.270946437543853,3.01013864312912,0,0,0,0,0,0,0.328014645699706,0,3.19427136107939,0.0915694648183434,0,0,0,0,5.31688950606671,4.46740989632469,9.3637241582939,8.1323577765873,1.39646318328756,6.0907011443976,4.34655799822115,22.0799448403909,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,1.86079184679834,0.949138274156178,1.33441135746677,0,16.6896205333229,0,0,0.179872457583315,0,0.235624804691373,0,0,0,1.46290121726877,0,0,0,0,1.13008116620243,0,0,0,0,7.87073702455959,0,0,0,0.286822704408103,5.01070109166918,0,0,0.211107635297664,0.987884678879706,0.75894634753143,8.74836800612457,0,0,0,1.7887322147588,0,0,0.886860307073351,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,52.0462976728164,24.0541391474437,126.857369966983,0,0,0,0,0.844501632511974,0.398495976502139,0.552567831062295,4.53478946137697,0,0,0,0,0,0,1.38100767891707,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.910347586283997,0.508507300585533,5.2005289988946,1.03423011972439,0,0,0,0,0,0,0,0,0,0,1.53900517007594,0,0,4.39812457607883,16.6230479040672,46.5741693208602,1.74035427463538,103.408746547615,0,0,0,0.451191321234361,0.588187602953219,0.503464760927528,0,0,0,0,0,0,0,0.176915129006678,18.9419344929424,0.296521128680622,0,0,0,107.545404738038,0,0,0,0,0.789168805698781,26.6179575307061,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,3.14508002835654,0,0,0,0,0.484945082442097,0,10.621094816685,0,0,0,0.391102765469606,0,0,67.3358384291779,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,1.59743200399193,2.57535628881943,1.33902874465124,3.42635709682304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,2.57027481861491,0,0,0,5.71756261098694,4.63464379255802,0.5085370753095,0,0,0,0,0,0,0.113312091520126,1.31897010310274,193.460057811843,0,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0.468334905806882,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.400721881242,0,0.673498977531838,0,0,0,1.30497145982606,0,0,0,0,0,0,0,0,0,0,1.72715170865599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09734283307391,0,3.71312769852847,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0.589848616738702,0.917142992608395,40.2029318203177,0,0,0,0.676892955143315,0,1.56302802246618,74.6434079272054,0,0.591424344868181,0,0,0,0,0,0.548257766857182,7.93937885422871,0,1.02209942111676,0,0,0,0,19.6032238059432,0,0.171488009437418,0,0,0,0,0.313972371402056,0,8.40816489941367,62.0947929946457,0,0,0.0714765441766563,0,0,0,0,0,0.3414369541879,0,0,0,0,1.27016115057279,4.582137370881,0,0,0,0,0,5.82685953469105,8.62367577592475,200.647896621508,9.22850886812365,0,0.397901550322736,0.118920090777569,0,0,0,0.0771741581079447,13.1135736302374,0,2.69663153929296,0.707029641304878,0,0,7.1851473689178,0,0,3.22289439867886,0,0.892769693028288,0,0,13.1460549884373,0,0,0.315543124386369,0,0.436350690340377,10.580536810308,1.11598505450025,0.462175628631418,31.1491124729128,0,1.09265571963696,0.760191006068622,0,0,0,0,0.757786982182394,1.07185652062471,0,0,4.05144565611864,30.4722472273588,0.0645889098360061,0.434523000071005,0,0.12729431655633,16.1693751166575,13.9338718654055,184.463749284966,0.942928742204225,0.860666464712116,43.2458463509817,0.0814032686109745,0,0,0,68.0458732970017,0.977931553462932,16.2758471326295,0.665756774185513,1.61019034872821,0 | ||
|short_description=p1@AF118081 | |||
}} | }} |
Latest revision as of 06:55, 17 September 2015
Short description: | p1@AF118081 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AF118081_5end |
Coexpression cluster: | C2119_tongue_liver_skeletal_amniotic_diaphragm_chorionic_Placental |
Association with transcript: | 261bp_to_AF118081_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.65e-14 | 19 |
cell of skeletal muscle | 1.59e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.74e-15 | 14 |
membranous layer | 1.74e-15 | 14 |
larynx | 6.04e-15 | 9 |
extraembryonic structure | 5.92e-14 | 24 |
upper respiratory tract | 2.51e-12 | 19 |
chorion | 2.32e-11 | 7 |
mesenchyme | 1.10e-10 | 160 |
entire embryonic mesenchyme | 1.10e-10 | 160 |
trunk mesenchyme | 2.10e-09 | 122 |
epithelial vesicle | 8.86e-08 | 78 |
muscle tissue | 9.39e-08 | 64 |
musculature | 9.39e-08 | 64 |
musculature of body | 9.39e-08 | 64 |
placenta | 1.70e-07 | 4 |
allantois | 1.70e-07 | 4 |
skeletal muscle tissue | 1.94e-07 | 62 |
striated muscle tissue | 1.94e-07 | 62 |
myotome | 1.94e-07 | 62 |
foregut | 2.38e-07 | 87 |
subdivision of digestive tract | 5.93e-07 | 118 |
intervertebral cartilage | 7.57e-07 | 5 |
symphysis | 7.57e-07 | 5 |
nonsynovial joint | 7.57e-07 | 5 |
fibrous joint | 7.57e-07 | 5 |
cartilaginous joint | 7.57e-07 | 5 |
developing mesenchymal condensation | 7.57e-07 | 5 |
pre-cartilage condensation | 7.57e-07 | 5 |
cartilaginous condensation | 7.57e-07 | 5 |
cartilage element | 7.57e-07 | 5 |
post-cranial axial skeletal system | 7.57e-07 | 5 |
vertebral column | 7.57e-07 | 5 |
intervertebral disk | 7.57e-07 | 5 |
intervertebral joint | 7.57e-07 | 5 |