FFCP PHASE1:Hg19::chr12:32974714..32974725,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5318 | |EntrezGene=5318 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9024 | |HGNC=9024 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000549461_5end | |||
|cluster_id=chr12:32974714..32974725,- | |||
|coexpression_cluster_id=C380 | |||
|description=CAGE_peak_13_at_PKP2_5end | |||
|id=chr12:32974714..32974725,- | |||
|ontology_enrichment_celltype=CL:0000946!3.08e-12!1;CL:0000786!3.08e-12!1;CL:0000980!3.08e-12!1;CL:0000785!9.54e-07!2;CL:0000955!9.54e-07!2;CL:0000818!9.54e-07!2;CL:0000954!9.54e-07!2;CL:0000816!9.54e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.27e-34;1!UBERON:0005062;7.69e-34;4!UBERON:0007284;7.69e-34;4!UBERON:0010226;8.34e-34;1 | |||
|ontology_enrichment_disease=DOID:114!2.79e-23!2;DOID:178!2.46e-12!1;DOID:326!2.46e-12!1;DOID:3978!2.46e-12!1;DOID:3394!2.46e-12!1;DOID:5844!2.46e-12!1;DOID:1287!3.86e-12!4 | |||
|ontology_enrichment_disease_v019=DOID:114;8.34e-18;2!DOID:1287;1.38e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.07e-18,2;DOID:1287,1.44e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!7.59e-26!27;UBERON:0003978!3.43e-16!3;UBERON:0009751!3.43e-16!3;UBERON:0000946!3.43e-16!3;UBERON:0002523!3.43e-16!3;UBERON:0005983!3.43e-16!3;UBERON:0002165!3.43e-16!3;UBERON:0002062!3.43e-16!3;UBERON:0007280!3.43e-16!3;UBERON:0004151!5.80e-16!3;UBERON:0002146!7.03e-13!1;UBERON:0005623!7.03e-13!1;UBERON:0002135!1.11e-12!1;UBERON:0002084!1.25e-12!1;UBERON:0002082!1.25e-12!1;UBERON:0004706!1.25e-12!1;UBERON:0002079!1.40e-12!1;UBERON:0002581!4.81e-12!1;UBERON:0000948!9.69e-12!24;UBERON:0005498!9.69e-12!24;UBERON:0004140!9.69e-12!24;UBERON:0009881!9.69e-12!24;UBERON:0004141!9.69e-12!24;UBERON:0003084!9.69e-12!24;UBERON:0007005!9.69e-12!24;UBERON:0004139!9.69e-12!24;UBERON:0004291!9.69e-12!24;UBERON:0007023!3.42e-10!115;UBERON:0003103!1.39e-09!69;UBERON:0002133!5.73e-07!2;UBERON:0001009!6.03e-07!113;UBERON:0002081!6.42e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.50e-47;25!UBERON:0003978;1.09e-44;3!UBERON:0000946;1.09e-44;3!UBERON:0002146;1.84e-34;1!UBERON:0005623;1.84e-34;1!UBERON:0002084;8.34e-34;1!UBERON:0002135;8.34e-34;1!UBERON:0002082;8.34e-34;1!UBERON:0000948;1.87e-24;22!UBERON:0002133;1.17e-17;2!UBERON:0010313;3.14e-14;10!UBERON:0004151;3.06e-12;3!UBERON:0003103;7.78e-10;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,9.77e-45,3;UBERON:0009751,9.77e-45,3;UBERON:0000946,9.77e-45,3;UBERON:0002523,9.77e-45,3;UBERON:0005983,9.77e-45,3;UBERON:0002165,9.77e-45,3;UBERON:0002062,9.77e-45,3;UBERON:0007280,9.77e-45,3;UBERON:0007100,4.38e-44,27;UBERON:0002146,1.84e-34,1;UBERON:0005623,1.84e-34,1;UBERON:0002135,7.06e-34,1;UBERON:0002084,9.85e-34,1;UBERON:0002082,9.85e-34,1;UBERON:0010226,9.85e-34,1;UBERON:0000948,1.72e-22,24;UBERON:0005498,1.72e-22,24;UBERON:0004140,1.72e-22,24;UBERON:0009881,1.72e-22,24;UBERON:0004141,1.72e-22,24;UBERON:0003084,1.72e-22,24;UBERON:0007005,1.72e-22,24;UBERON:0004139,1.72e-22,24;UBERON:0004291,1.72e-22,24;UBERON:0004797,7.13e-20,7;UBERON:0003103,7.10e-18,68;UBERON:0002133,1.07e-17,2;UBERON:0010313,3.04e-14,10;UBERON:0002342,3.04e-14,10;UBERON:0005062,3.04e-14,10;UBERON:0004151,3.24e-12,3;UBERON:0001009,4.95e-11,112;UBERON:0007023,1.12e-07,114;UBERON:0004872,6.64e-07,83 | |||
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|short_description=p13@PKP2 | |||
}} | }} |
Latest revision as of 05:17, 18 September 2015
Short description: | p13@PKP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PKP2_5end |
Coexpression cluster: | C380_heart_left_throat_skeletal_mesothelioma_aorta_Mesothelial |
Association with transcript: | 22bp_to_ENST00000549461_5end |
EntrezGene: | PKP2 |
HGNC: | 9024 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 9.77e-45 | 3 |
cardiac mesenchyme | 9.77e-45 | 3 |
cardial valve | 9.77e-45 | 3 |
tunica intima | 9.77e-45 | 3 |
heart layer | 9.77e-45 | 3 |
endocardium | 9.77e-45 | 3 |
endocardial cushion | 9.77e-45 | 3 |
presumptive endocardium | 9.77e-45 | 3 |
primary circulatory organ | 4.38e-44 | 27 |
pulmonary valve | 1.84e-34 | 1 |
semi-lunar valve | 1.84e-34 | 1 |
mitral valve | 7.06e-34 | 1 |
heart left ventricle | 9.85e-34 | 1 |
cardiac ventricle | 9.85e-34 | 1 |
future cardiac ventricle | 9.85e-34 | 1 |
heart | 1.72e-22 | 24 |
primitive heart tube | 1.72e-22 | 24 |
primary heart field | 1.72e-22 | 24 |
anterior lateral plate mesoderm | 1.72e-22 | 24 |
heart tube | 1.72e-22 | 24 |
heart primordium | 1.72e-22 | 24 |
cardiac mesoderm | 1.72e-22 | 24 |
cardiogenic plate | 1.72e-22 | 24 |
heart rudiment | 1.72e-22 | 24 |
blood vessel layer | 7.13e-20 | 7 |
compound organ | 7.10e-18 | 68 |
atrioventricular valve | 1.07e-17 | 2 |
neural crest-derived structure | 3.04e-14 | 10 |
neural crest | 3.04e-14 | 10 |
neural fold | 3.04e-14 | 10 |
cardiac chamber | 3.24e-12 | 3 |
circulatory system | 4.95e-11 | 112 |
adult organism | 1.12e-07 | 114 |
splanchnic layer of lateral plate mesoderm | 6.64e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.07e-18 | 2 |
cardiovascular system disease | 1.44e-09 | 4 |