FFCP PHASE1:Hg19::chr12:4690021..4690046,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:4690021..4690046,+ to FFCP PHASE1:Hg19::chr12:4690021..4690046,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:4690021..4690046,+ | |||
|description=CAGE_peak_at_chr12:4690021..4690046,+ | |||
|id=chr12:4690021..4690046,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.99e-21!24;CL:0000115!1.06e-17!35;CL:0000071!2.34e-14!18;CL:0002546!2.34e-14!18;CL:0002078!3.29e-13!44;CL:0002144!3.51e-10!3;CL:0000213!2.85e-09!57;CL:0000215!2.85e-09!57;CL:0002618!5.58e-09!3;CL:0005020!2.26e-08!6;CL:0002138!2.26e-08!6;CL:0005022!2.26e-08!6;CL:0002543!8.90e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002144;2.43e-50;3!CL:0002139;2.29e-33;24!CL:0002138;1.74e-25;6!CL:0000115;8.12e-23;36!CL:0002078;9.91e-18;45!CL:0000071;4.41e-15;18!CL:0000213;7.53e-10;58!CL:0000215;7.53e-10;58!CL:0002545;1.64e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,2.64e-50,3;CL:0002139,2.46e-33,24;CL:0000115,6.69e-29,36;CL:0005020,1.81e-25,6;CL:0002138,1.81e-25,6;CL:0005022,1.81e-25,6;CL:0002078,4.86e-23,45;CL:0000213,8.99e-18,58;CL:0000215,8.99e-18,58;CL:0000071,4.57e-15,18;CL:0002546,4.57e-15,18;CL:0002545,1.71e-09,2;CL:0000222,3.23e-08,121 | |||
|ontology_enrichment_development_v019=CL:0005022;1.74e-25;6!CL:0002546;4.41e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.34e-14!18;UBERON:0004638!2.34e-14!18;UBERON:0004852!2.34e-14!18;UBERON:0000487!2.43e-11!22;UBERON:0001915!3.51e-10!3;UBERON:0001982!3.51e-10!3;UBERON:0006914!1.02e-09!25;UBERON:0000055!6.32e-08!69;UBERON:0001638!1.36e-07!9;UBERON:0003920!1.36e-07!9;UBERON:0004582!1.36e-07!9;UBERON:0004872!2.74e-07!84;UBERON:0002465!3.14e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.43e-50;3!UBERON:0001915;2.43e-50;3!UBERON:0001982;2.43e-50;3!UBERON:0001473;2.65e-19;8!UBERON:0004536;2.65e-19;8!UBERON:0006558;2.65e-19;8!UBERON:0007029;1.12e-17;1!UBERON:0002465;1.39e-15;10!UBERON:0004638;4.41e-15;18!UBERON:0001986;4.41e-15;18!UBERON:0004852;4.41e-15;18!UBERON:0000487;2.10e-12;22!UBERON:0006914;5.93e-11;25!UBERON:0002405;3.92e-10;27!UBERON:0000055;7.84e-10;65!UBERON:0005800;1.64e-09;2!UBERON:0001515;1.64e-09;2!UBERON:0002049;2.16e-07;75!UBERON:0007798;2.16e-07;75!UBERON:0000490;2.27e-07;33!UBERON:0002106;9.37e-07;3!UBERON:0002193;9.86e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.64e-50,3;UBERON:0001915,2.64e-50,3;UBERON:0001982,2.64e-50,3;UBERON:0001473,2.73e-19,8;UBERON:0004536,2.73e-19,8;UBERON:0006558,2.73e-19,8;UBERON:0007029,7.37e-18,1;UBERON:0002465,1.43e-15,10;UBERON:0004638,4.57e-15,18;UBERON:0001986,4.57e-15,18;UBERON:0004852,4.57e-15,18;UBERON:0000487,2.17e-12,22;UBERON:0000055,1.45e-11,68;UBERON:0006914,6.09e-11,25;UBERON:0002049,4.96e-10,78;UBERON:0007798,4.96e-10,78;UBERON:0005800,1.71e-09,2;UBERON:0001515,1.71e-09,2;UBERON:0004535,4.79e-07,109;UBERON:0001009,7.62e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,2.41697590265488,3.80136052859256,1.22031028774085,1.10298924103761,0,0.17859945656816,0.44905874525234,0.337834441449967,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,2.59859605969933,1.38895653772983,2.09279567458058,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89159298970077,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0.628817220398664,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0,1.03382309777839,0.966868319603658,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0.109265571963696,0.126698501011437,0,1.06886962106224,0.0918948995348449,0,0.151557396436479,0,0,0,0,0.952257725854961,0,0,0,0.12729431655633,0.404234377916439,0,0.342233301085281,0.202056159043763,0,0.332660356546013,0,0,0,0,0,0.488965776731466,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,2.41697590265488,3.80136052859256,1.22031028774085,1.10298924103761,0,0.17859945656816,0.44905874525234,0.337834441449967,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,2.59859605969933,1.38895653772983,2.09279567458058,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89159298970077,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0.628817220398664,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0,1.03382309777839,0.966868319603658,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0.109265571963696,0.126698501011437,0,1.06886962106224,0.0918948995348449,0,0.151557396436479,0,0,0,0,0.952257725854961,0,0,0,0.12729431655633,0.404234377916439,0,0.342233301085281,0.202056159043763,0,0.332660356546013,0,0,0,0,0,0.488965776731466,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p@chr12:4690021..4690046,+ | |||
}} | }} |
Latest revision as of 08:42, 24 July 2015
Short description: | p@chr12:4690021..4690046, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:4690021..4690046, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 2.64e-50 | 3 |
endothelial cell of vascular tree | 2.46e-33 | 24 |
endothelial cell | 6.69e-29 | 36 |
lymphangioblast | 1.81e-25 | 6 |
endothelial cell of lymphatic vessel | 1.81e-25 | 6 |
vascular lymphangioblast | 1.81e-25 | 6 |
meso-epithelial cell | 4.86e-23 | 45 |
lining cell | 8.99e-18 | 58 |
barrier cell | 8.99e-18 | 58 |
blood vessel endothelial cell | 4.57e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.57e-15 | 18 |
thoracic aorta endothelial cell | 1.71e-09 | 2 |
mesodermal cell | 3.23e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 2.64e-50 | 3 |
endothelium of capillary | 2.64e-50 | 3 |
capillary | 2.64e-50 | 3 |
lymphatic vessel | 2.73e-19 | 8 |
lymph vasculature | 2.73e-19 | 8 |
lymphatic part of lymphoid system | 2.73e-19 | 8 |
surface | 7.37e-18 | 1 |
lymphoid system | 1.43e-15 | 10 |
blood vessel endothelium | 4.57e-15 | 18 |
endothelium | 4.57e-15 | 18 |
cardiovascular system endothelium | 4.57e-15 | 18 |
simple squamous epithelium | 2.17e-12 | 22 |
vessel | 1.45e-11 | 68 |
squamous epithelium | 6.09e-11 | 25 |
vasculature | 4.96e-10 | 78 |
vascular system | 4.96e-10 | 78 |
segment of aorta | 1.71e-09 | 2 |
thoracic aorta | 1.71e-09 | 2 |
cardiovascular system | 4.79e-07 | 109 |
circulatory system | 7.62e-07 | 112 |