FFCP PHASE1:Hg19::chr12:52884399..52884420,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:52884399..52884420,- to FFCP PHASE1:Hg19::chr12:52884399..52884420,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3853 | |EntrezGene=3853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6443 | |HGNC=6443 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000548735_5end | |||
|cluster_id=chr12:52884399..52884420,- | |||
|coexpression_cluster_id=C594 | |||
|description=CAGE_peak_7_at_KRT6A_5end | |||
|id=chr12:52884399..52884420,- | |||
|ontology_enrichment_celltype=CL:0002076!4.99e-33!43;CL:0002368!3.92e-23!13;CL:0000223!2.14e-22!59;CL:0000066!1.75e-19!254;CL:0002159!4.71e-19!13;CL:0000622!3.97e-16!5;CL:0002251!2.21e-15!21;CL:0000154!2.20e-13!6;CL:0002202!1.09e-12!9;CL:0002632!1.09e-12!9;CL:0002328!3.76e-11!3;CL:0000362!2.67e-10!8;CL:0002623!3.63e-10!3;CL:0002541!3.74e-10!3;CL:0000068!5.45e-10!3;CL:0000069!5.45e-10!3;CL:0000307!5.45e-10!3;CL:0000377!5.45e-10!3;CL:0002077!8.18e-10!33;CL:0002621!8.95e-10!3;CL:0000240!6.94e-09!6;CL:0000311!6.94e-09!6;CL:0000079!6.94e-09!6;CL:0000237!6.94e-09!6;CL:0000036!6.94e-09!6;CL:0000357!6.94e-09!6;CL:0000114!6.94e-09!6;CL:0000150!8.42e-09!9;CL:0000244!5.48e-08!4;CL:0000731!5.48e-08!4;CL:0000575!8.12e-08!2;CL:0000076!1.01e-07!62;CL:0000317!1.17e-07!2;CL:1000448!1.17e-07!2;CL:0002308!1.17e-07!2;CL:0002140!1.17e-07!2;CL:0002327!1.19e-07!4;CL:0000220!4.66e-07!246;CL:0002321!6.13e-07!248;CL:0002536!7.77e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.93e-24;13!CL:0002159;1.80e-22;14!CL:0002328;6.49e-17;3!CL:0000622;1.35e-16;5!CL:0002076;9.06e-16;42!CL:0002202;1.93e-14;9!CL:0002632;1.93e-14;9!CL:0000362;3.29e-14;9!CL:0000154;7.40e-14;6!CL:0000244;7.18e-12;4!CL:0000731;7.18e-12;4!CL:0000575;1.28e-11;2!CL:0002077;1.94e-11;34!CL:0000317;5.22e-11;2!CL:1000448;5.22e-11;2!CL:0002308;5.22e-11;2!CL:0002140;5.22e-11;2!CL:0000312;4.38e-10;5!CL:0000349;1.45e-09;19!CL:0000150;2.80e-09;9!CL:0000240;1.77e-08;6!CL:0000311;1.77e-08;6!CL:0000079;1.77e-08;6!CL:0000237;1.77e-08;6!CL:0002541;5.69e-08;3!CL:0002231;5.69e-08;3!CL:0002623;6.65e-08;3!CL:0002577;8.04e-08;3!CL:0000307;1.27e-07;3!CL:0002252;9.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.92e-24,13;CL:0002159,1.76e-22,14;CL:0002076,3.53e-21,42;CL:0002328,6.17e-17,3;CL:0000622,9.79e-17,5;CL:0000223,1.63e-14,58;CL:0002202,2.43e-14,9;CL:0002632,2.43e-14,9;CL:0000362,2.71e-14,9;CL:0000154,5.66e-14,6;CL:0002077,1.97e-13,34;CL:0000066,3.69e-12,253;CL:0000244,4.39e-12,4;CL:0000731,4.39e-12,4;CL:0000575,1.35e-11,2;CL:0000317,2.41e-11,2;CL:1000448,2.41e-11,2;CL:0002308,2.41e-11,2;CL:0002140,2.41e-11,2;CL:0000312,5.61e-10,5;CL:0000349,1.36e-09,19;CL:0000150,2.35e-09,9;CL:0000240,2.18e-08,6;CL:0000311,2.18e-08,6;CL:0000079,2.18e-08,6;CL:0000237,2.18e-08,6;CL:0000036,2.18e-08,6;CL:0000357,2.18e-08,6;CL:0000114,2.18e-08,6;CL:0002231,4.23e-08,3;CL:0002541,6.00e-08,3;CL:0002577,6.66e-08,3;CL:0002623,8.48e-08,3;CL:0000068,1.73e-07,3;CL:0000069,1.73e-07,3;CL:0000307,1.73e-07,3;CL:0000377,1.73e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.53e-09;58!CL:0000357;1.77e-08;6!CL:0000114;1.77e-08;6!CL:0000377;1.27e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!6.70e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.23e-17!14;UBERON:0000158!3.23e-17!14;UBERON:0000166!1.79e-15!21;UBERON:0000165!1.91e-15!28;UBERON:0000930!1.91e-15!28;UBERON:0001004!6.87e-14!72;UBERON:0000161!3.68e-12!35;UBERON:0004119!7.88e-12!169;UBERON:0000925!7.88e-12!169;UBERON:0006595!7.88e-12!169;UBERON:0003102!1.10e-11!95;UBERON:0003124!1.89e-11!7;UBERON:0004815!3.76e-11!3;UBERON:0002031!3.76e-11!3;UBERON:0001444!6.62e-11!48;UBERON:0000476!3.74e-10!3;UBERON:0000920!3.74e-10!3;UBERON:0001949!8.95e-10!3;UBERON:0000478!2.63e-09!24;UBERON:0002185!1.90e-08!4;UBERON:0007196!6.88e-08!14;UBERON:0001558!6.88e-08!14;UBERON:0002419!1.17e-07!2;UBERON:0007771!1.17e-07!2;UBERON:0003297!1.17e-07!2;UBERON:0001821!1.17e-07!2;UBERON:0003487!1.17e-07!2;UBERON:0001820!1.17e-07!2;UBERON:0005089!1.17e-07!2;UBERON:0005088!1.17e-07!2;UBERON:0001911!1.19e-07!4;UBERON:0005333!1.19e-07!4;UBERON:0008425!1.19e-07!4;UBERON:0005311!1.19e-07!4;UBERON:0000305!1.25e-07!7;UBERON:0000078!1.54e-07!18;UBERON:0000065!2.56e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;6.49e-17;3!UBERON:0002031;6.49e-17;3!UBERON:0002419;5.22e-11;2!UBERON:0007771;5.22e-11;2!UBERON:0003297;5.22e-11;2!UBERON:0001821;5.22e-11;2!UBERON:0003487;5.22e-11;2!UBERON:0001820;5.22e-11;2!UBERON:0002185;2.42e-10;5!UBERON:0000365;1.35e-09;5!UBERON:0005631;7.28e-09;10!UBERON:0000158;7.28e-09;10!UBERON:0007196;1.46e-08;15!UBERON:0001558;1.46e-08;15!UBERON:0001003;1.99e-08;15!UBERON:0007376;1.99e-08;15!UBERON:0005910;4.51e-08;6!UBERON:0003124;5.69e-08;3!UBERON:0000920;5.69e-08;3!UBERON:0000485;1.66e-07;7!UBERON:0000478;1.93e-07;24!UBERON:0000486;7.59e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,6.17e-17,3;UBERON:0002031,6.17e-17,3;UBERON:0005631,3.06e-13,14;UBERON:0000158,3.06e-13,14;UBERON:0003124,3.57e-12,7;UBERON:0002419,2.41e-11,2;UBERON:0007771,2.41e-11,2;UBERON:0003297,2.41e-11,2;UBERON:0001821,2.41e-11,2;UBERON:0003487,2.41e-11,2;UBERON:0001820,2.41e-11,2;UBERON:0005089,2.41e-11,2;UBERON:0005088,2.41e-11,2;UBERON:0002185,2.35e-10,5;UBERON:0000365,9.15e-10,5;UBERON:0003102,1.56e-08,99;UBERON:0007196,1.67e-08,15;UBERON:0001558,1.67e-08,15;UBERON:0001003,1.78e-08,15;UBERON:0007376,1.78e-08,15;UBERON:0007383,1.78e-08,15;UBERON:0004119,1.90e-08,160;UBERON:0000925,1.90e-08,160;UBERON:0006595,1.90e-08,160;UBERON:0005910,3.26e-08,6;UBERON:0000920,6.00e-08,3;UBERON:0001004,1.13e-07,74;UBERON:0000478,1.83e-07,24 | |||
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| ||
|short_description=p7@KRT6A | |||
}} | }} |
Latest revision as of 22:47, 18 September 2015
Short description: | p7@KRT6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_KRT6A_5end |
Coexpression cluster: | C594_Keratinocyte_Placental_amniotic_Esophageal_tongue_Corneal_Prostate |
Association with transcript: | 0bp_to_ENST00000548735_5end |
EntrezGene: | KRT6A |
HGNC: | 6443 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 6.17e-17 | 3 |
epithelium of bronchus | 6.17e-17 | 3 |
extraembryonic membrane | 3.06e-13 | 14 |
membranous layer | 3.06e-13 | 14 |
chorion | 3.57e-12 | 7 |
skin gland | 2.41e-11 | 2 |
epidermis gland | 2.41e-11 | 2 |
gland of integumental system | 2.41e-11 | 2 |
sebaceous gland | 2.41e-11 | 2 |
skin sebaceous gland | 2.41e-11 | 2 |
sweat gland | 2.41e-11 | 2 |
sweat gland placode | 2.41e-11 | 2 |
sebaceous gland placode | 2.41e-11 | 2 |
bronchus | 2.35e-10 | 5 |
urothelium | 9.15e-10 | 5 |
surface structure | 1.56e-08 | 99 |
tracheobronchial tree | 1.67e-08 | 15 |
lower respiratory tract | 1.67e-08 | 15 |
skin epidermis | 1.78e-08 | 15 |
outer epithelium | 1.78e-08 | 15 |
enveloping layer of ectoderm | 1.78e-08 | 15 |
endoderm-derived structure | 1.90e-08 | 160 |
endoderm | 1.90e-08 | 160 |
presumptive endoderm | 1.90e-08 | 160 |
transitional epithelium | 3.26e-08 | 6 |
egg chorion | 6.00e-08 | 3 |
respiratory system | 1.13e-07 | 74 |
extraembryonic structure | 1.83e-07 | 24 |