FFCP PHASE1:Hg19::chr12:97858979..97858990,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:97858979..97858990,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr12:97858979..97858990,+ | |||
|id=chr12:97858979..97858990,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.66e-29!5;CL:0000047!5.94e-12!8;CL:0000540!1.60e-09!6;CL:0000031!1.60e-09!6;CL:0000404!1.60e-09!6;CL:0000064!2.91e-08!3;CL:0005012!2.91e-08!3;CL:0000067!2.91e-08!3;CL:0002304!2.91e-08!3;CL:0000075!5.25e-07!27;CL:0000710!5.94e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.41e-108;5!CL:0002321;1.51e-36;15!CL:0000540;1.31e-33;6!CL:0000404;1.31e-33;6!CL:0000148;2.58e-20;10!CL:0000147;9.97e-15;14!CL:0000710;1.63e-10;20!CL:0002319;5.12e-08;25!CL:0000075;5.99e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.77e-108,5;CL:0000540,1.17e-33,6;CL:0000031,1.17e-33,6;CL:0000404,1.17e-33,6;CL:0000047,1.85e-25,8;CL:0000148,2.85e-20,10;CL:0000541,2.85e-20,10;CL:0000147,1.07e-14,14;CL:0000133,5.69e-13,59;CL:0000221,1.08e-10,72;CL:0000710,1.71e-10,20;CL:0002319,5.00e-08,25;CL:0000075,6.21e-08,27 | |||
|ontology_enrichment_development_v019=CL:0000031;1.31e-33;6!CL:0000133;5.89e-08;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006331!4.67e-17!3;UBERON:0000988!7.28e-17!3;UBERON:0002298!1.17e-16!8;UBERON:0005743!1.56e-12!86;UBERON:0002148!5.19e-12!2;UBERON:0009662!5.19e-12!2;UBERON:0001017!1.47e-11!82;UBERON:0000073!4.58e-11!94;UBERON:0001016!4.58e-11!94;UBERON:0003075!3.06e-09!86;UBERON:0007284!3.06e-09!86;UBERON:0003076!8.05e-09!15;UBERON:0003057!8.05e-09!15;UBERON:0002346!1.02e-08!90;UBERON:0001778!2.91e-08!3;UBERON:0001775!2.91e-08!3;UBERON:0001049!1.64e-07!57;UBERON:0005068!1.64e-07!57;UBERON:0006241!1.64e-07!57;UBERON:0007135!1.64e-07!57;UBERON:0004121!1.93e-07!169;UBERON:0004733!2.46e-07!12;UBERON:0002028!2.46e-07!12;UBERON:0007277!2.46e-07!12;UBERON:0002616!3.36e-07!59;UBERON:0000924!3.48e-07!173;UBERON:0006601!3.48e-07!173;UBERON:0000998!3.57e-07!1;UBERON:0006868!3.57e-07!1;UBERON:0004732!8.87e-07!13;UBERON:0002038!9.51e-07!1;UBERON:0009661!9.51e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr12:97858979..97858990,+ | |||
}} | }} |
Latest revision as of 13:58, 24 July 2015
Short description: | p@chr12:97858979..97858990, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:97858979..97858990, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.77e-108 | 5 |
neuron | 1.17e-33 | 6 |
neuroblast | 1.17e-33 | 6 |
electrically signaling cell | 1.17e-33 | 6 |
neuronal stem cell | 1.85e-25 | 8 |
melanocyte | 2.85e-20 | 10 |
melanoblast | 2.85e-20 | 10 |
pigment cell | 1.07e-14 | 14 |
neurectodermal cell | 5.69e-13 | 59 |
ectodermal cell | 1.08e-10 | 72 |
neurecto-epithelial cell | 1.71e-10 | 20 |
neural cell | 5.00e-08 | 25 |
columnar/cuboidal epithelial cell | 6.21e-08 | 27 |