FFCP PHASE1:Hg19::chr15:40366561..40366568,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:40366561..40366568,- to FFCP PHASE1:Hg19::chr15:40366561..40366568,-: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:40366561..40366568,- | |||
|coexpression_cluster_id=C330 | |||
|description=CAGE_peak_at_chr15:40366561..40366568,- | |||
|id=chr15:40366561..40366568,- | |||
|ontology_enrichment_celltype=CL:0000860!3.32e-29!45;CL:0000037!1.72e-27!172;CL:0000566!1.72e-27!172;CL:0002031!2.90e-27!124;CL:0000839!1.25e-26!70;CL:0000557!2.94e-26!71;CL:0000988!6.37e-26!182;CL:0000738!1.14e-25!140;CL:0002009!2.01e-25!65;CL:0002057!2.09e-25!42;CL:0002032!6.00e-25!165;CL:0000837!6.00e-25!165;CL:0002194!7.04e-25!63;CL:0000576!7.04e-25!63;CL:0000040!7.04e-25!63;CL:0000559!7.04e-25!63;CL:0002087!1.91e-24!119;CL:0000763!2.20e-22!112;CL:0000049!2.20e-22!112;CL:0000766!3.49e-22!76;CL:0000219!2.19e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.06e-13;33!CL:0002057;3.06e-13;33!CL:0000473;3.03e-10;39!CL:0000234;3.03e-10;39!CL:0000576;1.87e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.17e-11,42;CL:0002057,6.17e-11,42;CL:0000473,2.16e-09,48;CL:0000234,2.16e-09,48;CL:0002194,5.03e-09,59;CL:0000576,5.03e-09,59;CL:0000040,5.03e-09,59;CL:0000559,5.03e-09,59;CL:0002009,1.11e-08,61;CL:0000839,6.60e-08,66;CL:0000557,9.12e-08,67;CL:0000037,1.36e-07,168;CL:0000738,1.38e-07,136;CL:0000766,4.03e-07,72;CL:0000988,4.82e-07,177;CL:0002087,6.98e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.73e-10;10!UBERON:0005564;1.73e-10;10!CL:0002057;1.47e-08;42 | |||
|ontology_enrichment_disease=DOID:2531!9.39e-10!51;DOID:0060083!9.39e-10!51;DOID:162!8.76e-09!235;DOID:0060058!2.12e-08!10;DOID:14566!2.74e-08!239;DOID:305!3.55e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.53e-22!115;UBERON:0002371!7.29e-22!80;UBERON:0002390!3.52e-21!102;UBERON:0003061!3.52e-21!102;UBERON:0001474!1.84e-19!86;UBERON:0002193!5.72e-19!112;UBERON:0004765!9.16e-15!101;UBERON:0001434!9.16e-15!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.54e-14;2!UBERON:0005058;1.54e-14;2!UBERON:0009113;1.54e-14;2!UBERON:0000473;8.22e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.67e-08,8;UBERON:0002405,1.11e-07,93;UBERON:0002370,1.15e-07,4;UBERON:0005058,1.15e-07,4;UBERON:0009113,1.15e-07,4;UBERON:0003295,1.15e-07,4;UBERON:0005562,1.15e-07,4;UBERON:0002390,3.49e-07,98;UBERON:0003061,3.49e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0.217010870715852,3.13481663935894,0.647787332037959,0.257575567634187,0.436194716338694,0.377875943688809,1.21292030593908,0.464858073811369,0.822335776043652,0.309706370895104,2.8769239232215,1.0246428261164,0.945928919554341,1.03423704220986,2.5819387343353,0,0.564727018627814,0.272906150057846,0.674170453335254,0.612167784741805,0.641858054152187,1.91801137739712,0,0.797854630486527,0.426224750532694,0.580418477257168,1.70215567407342,0,1.25624332628372,0.521482918420201,0.217188844705117,0.605399502633369,1.47311054395026,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32208974556972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0.715471872916026,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,4.90878719104057,0.637705090915289,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,1.23087398947712,0.540911356951966,0.66614393599564,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.246169610922139,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,103.735489319449,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0,0,0,1.02193298195737,0,0.166211681900156,0,0,0.503464760927528,0,3.01979500062719,0,0.163232808159148,0,0,0,0,0,0.889563386041866,0,0,0.067401132980677,0,0,0.547364367646998,0,0,0,0,0,0,17.4375166520811,0.622129148383483,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.261177619741208,0,0,0.774050650312681,1.38869702463753,0.410577285266046,0,0,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,1.16495949527454,0.472699093843342,0.247247575143499,0.202210631562555,0.196854963029498,0.338693328263138,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0,0,0.104909176269996,25.449681101177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0,0,0.123935764259002,0,0,1.73495839002757,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,1.91244099532837,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0.397901550322736,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00933139868063,0.218531143927391,0.253397002022874,0.407955318967927,0,0,1.75495277504663,1.06090177505535,2.67964130156179,0,0.103432995861895,0,0.714193294391221,2.32520075409622,13.4702130022012,0.112131862580613,0,0,0,0,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0.217010870715852,3.13481663935894,0.647787332037959,0.257575567634187,0.436194716338694,0.377875943688809,1.21292030593908,0.464858073811369,0.822335776043652,0.309706370895104,2.8769239232215,1.0246428261164,0.945928919554341,1.03423704220986,2.5819387343353,0,0.564727018627814,0.272906150057846,0.674170453335254,0.612167784741805,0.641858054152187,1.91801137739712,0,0.797854630486527,0.426224750532694,0.580418477257168,1.70215567407342,0,1.25624332628372,0.521482918420201,0.217188844705117,0.605399502633369,1.47311054395026,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32208974556972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0.715471872916026,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,4.90878719104057,0.637705090915289,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,1.23087398947712,0.540911356951966,0.66614393599564,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.246169610922139,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,103.735489319449,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0,0,0,1.02193298195737,0,0.166211681900156,0,0,0.503464760927528,0,3.01979500062719,0,0.163232808159148,0,0,0,0,0,0.889563386041866,0,0,0.067401132980677,0,0,0.547364367646998,0,0,0,0,0,0,17.4375166520811,0.622129148383483,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.261177619741208,0,0,0.774050650312681,1.38869702463753,0.410577285266046,0,0,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,1.16495949527454,0.472699093843342,0.247247575143499,0.202210631562555,0.196854963029498,0.338693328263138,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0,0,0.104909176269996,25.449681101177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0,0,0.123935764259002,0,0,1.73495839002757,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,1.91244099532837,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0.397901550322736,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00933139868063,0.218531143927391,0.253397002022874,0.407955318967927,0,0,1.75495277504663,1.06090177505535,2.67964130156179,0,0.103432995861895,0,0.714193294391221,2.32520075409622,13.4702130022012,0.112131862580613,0,0,0,0,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:40366561..40366568,- | |||
}} | }} |
Latest revision as of 01:25, 25 July 2015
Short description: | p@chr15:40366561..40366568, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:40366561..40366568, - |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.17e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.17e-11 | 42 |
defensive cell | 2.16e-09 | 48 |
phagocyte | 2.16e-09 | 48 |
monopoietic cell | 5.03e-09 | 59 |
monocyte | 5.03e-09 | 59 |
monoblast | 5.03e-09 | 59 |
promonocyte | 5.03e-09 | 59 |
macrophage dendritic cell progenitor | 1.11e-08 | 61 |
myeloid lineage restricted progenitor cell | 6.60e-08 | 66 |
granulocyte monocyte progenitor cell | 9.12e-08 | 67 |
hematopoietic stem cell | 1.36e-07 | 168 |
leukocyte | 1.38e-07 | 136 |
myeloid leukocyte | 4.03e-07 | 72 |
hematopoietic cell | 4.82e-07 | 177 |
nongranular leukocyte | 6.98e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
testis | 7.67e-08 | 8 |
immune system | 1.11e-07 | 93 |
thymus | 1.15e-07 | 4 |
hemolymphoid system gland | 1.15e-07 | 4 |
thymic region | 1.15e-07 | 4 |
pharyngeal gland | 1.15e-07 | 4 |
thymus primordium | 1.15e-07 | 4 |
hematopoietic system | 3.49e-07 | 98 |
blood island | 3.49e-07 | 98 |