FFCP PHASE1:Hg19::chr16:2220346..2220365,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:2220346..2220365,+ to FFCP PHASE1:Hg19::chr16:2220346..2220365,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:2220346..2220365,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_at_chr16:2220346..2220365,+ | |||
|id=chr16:2220346..2220365,+ | |||
|ontology_enrichment_celltype=CL:0002139!6.77e-35!24;CL:0000115!1.09e-32!35;CL:0000071!7.12e-27!18;CL:0002546!7.12e-27!18;CL:0002078!1.09e-23!44;CL:0000213!7.33e-16!57;CL:0000215!7.33e-16!57;CL:1000413!2.32e-14!9;CL:0002543!4.28e-10!6;CL:0002544!4.34e-10!6;CL:0005020!1.52e-09!6;CL:0002138!1.52e-09!6;CL:0005022!1.52e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.39e-63;24!CL:0000115;4.59e-54;36!CL:0000071;1.97e-48;18!CL:0002078;1.48e-31;45!CL:1000413;3.41e-25;9!CL:0000213;2.38e-22;58!CL:0000215;2.38e-22;58!CL:0002543;2.60e-17;6!CL:0002544;2.74e-17;6!CL:0002138;2.76e-16;6!CL:0002188;1.90e-09;5!CL:0002618;2.76e-09;3!CL:0002144;3.76e-09;3!CL:0000076;6.64e-07;63!CL:0002545;7.65e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.20e-64,36;CL:0002139,2.44e-63,24;CL:0002078,1.65e-49,45;CL:0000071,2.03e-48,18;CL:0002546,2.03e-48,18;CL:0000213,2.39e-36,58;CL:0000215,2.39e-36,58;CL:1000413,3.43e-25,9;CL:0002543,2.65e-17,6;CL:0002544,2.72e-17,6;CL:0005020,2.74e-16,6;CL:0002138,2.74e-16,6;CL:0005022,2.74e-16,6;CL:0000222,6.52e-13,121;CL:0000076,3.77e-10,63;CL:0002188,1.91e-09,5;CL:0002618,2.80e-09,3;CL:0002144,3.77e-09,3;CL:0002545,7.66e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.97e-48;18!CL:0005022;2.76e-16;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.10e-45!115;UBERON:0001986!7.12e-27!18;UBERON:0004638!7.12e-27!18;UBERON:0004852!7.12e-27!18;UBERON:0004111!1.20e-25!241;UBERON:0000477!9.43e-24!286;UBERON:0000025!7.56e-22!194;UBERON:0000487!9.90e-21!22;UBERON:0006914!1.94e-17!25;UBERON:0001049!7.86e-16!57;UBERON:0005068!7.86e-16!57;UBERON:0006241!7.86e-16!57;UBERON:0007135!7.86e-16!57;UBERON:0000055!9.04e-16!69;UBERON:0000483!5.15e-15!309;UBERON:0000119!1.28e-14!312;UBERON:0003075!1.97e-14!86;UBERON:0007284!1.97e-14!86;UBERON:0003915!2.32e-14!9;UBERON:0004700!2.32e-14!9;UBERON:0001917!2.32e-14!9;UBERON:0003080!1.35e-13!42;UBERON:0002346!2.93e-13!90;UBERON:0002049!3.82e-13!79;UBERON:0007798!3.82e-13!79;UBERON:0002780!1.15e-12!41;UBERON:0001890!1.15e-12!41;UBERON:0006240!1.15e-12!41;UBERON:0004872!3.73e-12!84;UBERON:0001981!8.05e-12!60;UBERON:0007500!8.05e-12!60;UBERON:0004537!8.05e-12!60;UBERON:0006965!8.05e-12!60;UBERON:0002616!8.31e-12!59;UBERON:0002020!1.45e-11!34;UBERON:0003528!1.45e-11!34;UBERON:0000467!8.46e-11!625;UBERON:0002619!9.32e-11!22;UBERON:0000480!1.01e-10!626;UBERON:0001950!1.28e-10!20;UBERON:0000468!1.86e-10!659;UBERON:0001009!2.34e-10!113;UBERON:0001893!2.83e-10!34;UBERON:0001869!4.45e-10!32;UBERON:0001017!4.73e-10!82;UBERON:0005743!6.46e-10!86;UBERON:0002791!9.55e-10!33;UBERON:0004535!1.28e-09!110;UBERON:0003056!1.45e-09!61;UBERON:0003914!1.76e-09!118;UBERON:0000955!2.39e-09!69;UBERON:0006238!2.39e-09!69;UBERON:0000956!5.30e-09!25;UBERON:0000203!5.30e-09!25;UBERON:0000073!8.45e-09!94;UBERON:0001016!8.45e-09!94;UBERON:0002465!9.51e-09!10;UBERON:0001638!2.41e-08!9;UBERON:0003920!2.41e-08!9;UBERON:0004582!2.41e-08!9;UBERON:0000064!1.45e-07!219;UBERON:0000922!3.09e-07!612;UBERON:0002050!6.87e-07!605;UBERON:0005423!6.87e-07!605;UBERON:0001473!7.76e-07!8;UBERON:0004536!7.76e-07!8;UBERON:0006558!7.76e-07!8;UBERON:0000481!8.17e-07!347;UBERON:0000153!8.52e-07!129;UBERON:0007811!8.52e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.97e-48;18!UBERON:0001986;1.97e-48;18!UBERON:0004852;1.97e-48;18!UBERON:0000487;1.26e-38;22!UBERON:0006914;2.45e-33;25!UBERON:0003915;3.41e-25;9!UBERON:0004700;3.41e-25;9!UBERON:0001917;3.41e-25;9!UBERON:0000490;1.83e-24;33!UBERON:0000055;6.56e-15;65!UBERON:0001638;7.12e-15;9!UBERON:0003920;7.12e-15;9!UBERON:0004582;7.12e-15;9!UBERON:0002465;1.43e-12;10!UBERON:0001473;5.26e-12;8!UBERON:0004536;5.26e-12;8!UBERON:0006558;5.26e-12;8!UBERON:0007500;7.50e-11;56!UBERON:0001981;7.50e-11;56!UBERON:0004537;7.50e-11;56!UBERON:0002049;3.23e-09;75!UBERON:0007798;3.23e-09;75!UBERON:0010523;3.76e-09;3!UBERON:0001915;3.76e-09;3!UBERON:0001982;3.76e-09;3!UBERON:0003914;2.27e-08;74!UBERON:0000025;3.13e-07;93!UBERON:0005800;7.65e-07;2!UBERON:0001515;7.65e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.03e-48,18;UBERON:0001986,2.03e-48,18;UBERON:0004852,2.03e-48,18;UBERON:0000487,1.29e-38,22;UBERON:0006914,2.50e-33,25;UBERON:0003915,3.43e-25,9;UBERON:0004700,3.43e-25,9;UBERON:0001917,3.43e-25,9;UBERON:0000055,5.06e-25,68;UBERON:0002049,9.18e-21,78;UBERON:0007798,9.18e-21,78;UBERON:0007500,1.85e-17,59;UBERON:0001981,1.85e-17,59;UBERON:0004537,1.85e-17,59;UBERON:0006965,1.85e-17,59;UBERON:0004872,5.08e-17,83;UBERON:0004535,7.73e-15,109;UBERON:0001638,8.00e-15,9;UBERON:0003920,8.00e-15,9;UBERON:0004582,8.00e-15,9;UBERON:0003914,2.67e-14,117;UBERON:0001009,3.20e-14,112;UBERON:0002465,1.45e-12,10;UBERON:0001473,5.22e-12,8;UBERON:0004536,5.22e-12,8;UBERON:0006558,5.22e-12,8;UBERON:0004111,9.97e-12,240;UBERON:0003887,2.72e-10,12;UBERON:0010523,3.77e-09,3;UBERON:0001915,3.77e-09,3;UBERON:0001982,3.77e-09,3;UBERON:0000025,1.17e-08,192;UBERON:0004876,2.49e-08,11;UBERON:0000080,1.60e-07,9;UBERON:0002120,1.60e-07,9;UBERON:0004875,1.60e-07,9;UBERON:0005721,1.60e-07,9;UBERON:0005754,1.60e-07,9;UBERON:0007297,1.60e-07,9;UBERON:0007023,5.77e-07,114;UBERON:0005800,7.66e-07,2;UBERON:0001515,7.66e-07,2 | |||
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| ||
|short_description=p@chr16:2220346..2220365,+ | |||
}} | }} |
Latest revision as of 07:09, 25 July 2015
Short description: | p@chr16:2220346..2220365, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2220346..2220365, + |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.20e-64 | 36 |
endothelial cell of vascular tree | 2.44e-63 | 24 |
meso-epithelial cell | 1.65e-49 | 45 |
blood vessel endothelial cell | 2.03e-48 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.03e-48 | 18 |
lining cell | 2.39e-36 | 58 |
barrier cell | 2.39e-36 | 58 |
endothelial cell of artery | 3.43e-25 | 9 |
vein endothelial cell | 2.65e-17 | 6 |
aortic endothelial cell | 2.72e-17 | 6 |
lymphangioblast | 2.74e-16 | 6 |
endothelial cell of lymphatic vessel | 2.74e-16 | 6 |
vascular lymphangioblast | 2.74e-16 | 6 |
mesodermal cell | 6.52e-13 | 121 |
squamous epithelial cell | 3.77e-10 | 63 |
glomerular endothelial cell | 1.91e-09 | 5 |
endothelial cell of umbilical vein | 2.80e-09 | 3 |
capillary endothelial cell | 3.77e-09 | 3 |
thoracic aorta endothelial cell | 7.66e-07 | 2 |